Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-1107P-201ENST00000364817 104 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-1014P-201ENST00000383940 103 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-756P-201ENST00000383997 107 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-243P-201ENST00000391140 107 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 SNORD110-201ENST00000408189 75 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 AC093423.1-201ENST00000440817 142 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 TMSB4XP3-201ENST00000445144 114 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 RNU5B-6P-201ENST00000516765 68 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 AL513043.2-201ENST00000573941 143 ntBASIC0.06□□□□□ -2.4
TRIM49D1C9J1S8 MIRLET7F1-201ENST00000362202 87 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 RNU1-141P-201ENST00000364623 158 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 Y_RNA.281-201ENST00000364774 94 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-554P-201ENST00000410466 106 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-109P-201ENST00000516364 107 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-184P-201ENST00000516514 107 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 MIR548AD-201ENST00000584780 82 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 AC103810.7-201ENST00000607821 91 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
TRIM49D1C9J1S8 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-132P-201ENST00000383863 107 ntBASIC0.04□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-22P-201ENST00000384355 107 ntBASIC0.04□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-880P-201ENST00000384526 107 ntBASIC0.04□□□□□ -2.4
TRIM49D1C9J1S8 MIR145-201ENST00000384967 88 ntBASIC0.04□□□□□ -2.4
TRIM49D1C9J1S8 SNORD90-201ENST00000391145 111 ntBASIC0.04□□□□□ -2.4
TRIM49D1C9J1S8 MIR4696-201ENST00000581431 70 ntBASIC0.04□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-161P-201ENST00000363051 106 ntBASIC0.03□□□□□ -2.4
TRIM49D1C9J1S8 Y_RNA.95-201ENST00000363079 95 ntBASIC0.03□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-1144P-201ENST00000384247 104 ntBASIC0.03□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-929P-201ENST00000384429 107 ntBASIC0.03□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-476P-201ENST00000384726 107 ntBASIC0.03□□□□□ -2.4
TRIM49D1C9J1S8 MIR590-201ENST00000385008 97 ntBASIC0.03□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-1168P-201ENST00000390831 104 ntBASIC0.03□□□□□ -2.4
TRIM49D1C9J1S8 RNU6-537P-201ENST00000517277 103 ntBASIC0.03□□□□□ -2.4
TRIM49D1C9J1S8 RNA5SP205-201ENST00000364653 136 ntBASIC0.02□□□□□ -2.41
TRIM49D1C9J1S8 MIR617-201ENST00000385030 97 ntBASIC0.02□□□□□ -2.41
TRIM49D1C9J1S8 YWHAEP2-201ENST00000580066 112 ntBASIC0.02□□□□□ -2.41
TRIM49D1C9J1S8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.02□□□□□ -2.41
TRIM49D1C9J1S8 Y_RNA.125-201ENST00000363371 111 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-106P-201ENST00000384405 107 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 AC008267.6-201ENST00000441664 139 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-904P-201ENST00000516206 101 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 SCARNA11.2-201ENST00000517183 154 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 RN7SL660P-201ENST00000614852 299 ntBASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.01□□□□□ -2.41
TRIM49D1C9J1S8 SNORD101-201ENST00000384027 73 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 MIR516B1-201ENST00000385211 90 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-644P-201ENST00000391155 98 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-466P-201ENST00000391224 103 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 RNA5SP163-201ENST00000410304 99 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-1064P-201ENST00000410626 104 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-762P-201ENST00000517107 102 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 AC073869.9-201ENST00000641610 120 ntBASIC0□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-664P-201ENST00000362381 107 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-54P-201ENST00000365563 107 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6V-201ENST00000384105 107 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 AL603908.1-201ENST00000406098 201 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 AC097510.1-201ENST00000510945 133 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-162P-201ENST00000516228 103 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-589P-201ENST00000516485 107 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-719P-201ENST00000516671 104 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 MIR5706-201ENST00000579841 80 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 AC132825.6-201ENST00000638861 357 ntBASIC-0.01□□□□□ -2.41
TRIM49D1C9J1S8 RNA5SP292-201ENST00000390974 118 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 RNU7-61P-201ENST00000515897 61 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 SNORA25.13-201ENST00000516395 103 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 RNU7-188P-201ENST00000517063 64 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 MIR4460-201ENST00000577862 86 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 MIR3140-201ENST00000583685 90 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 AC096720.1-201ENST00000604441 183 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.02□□□□□ -2.41
TRIM49D1C9J1S8 MIR450A1-201ENST00000362262 91 ntBASIC-0.03□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-509P-201ENST00000363519 107 ntBASIC-0.03□□□□□ -2.41
TRIM49D1C9J1S8 SNORD45B-201ENST00000364617 72 ntBASIC-0.03□□□□□ -2.41
TRIM49D1C9J1S8 RNU6-813P-201ENST00000384691 107 ntBASIC-0.03□□□□□ -2.41
TRIM49D1C9J1S8 MIR451A-201ENST00000385059 72 ntBASIC-0.03□□□□□ -2.41
TRIM49D1C9J1S8 AL606753.1-201ENST00000427435 87 ntBASIC-0.03□□□□□ -2.41
TRIM49D1C9J1S8 MIR6514-201ENST00000622549 70 ntBASIC-0.03□□□□□ -2.41
TRIM49D1C9J1S8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.03□□□□□ -2.41
TRIM49D1C9J1S8 SNORA63.4-201ENST00000362763 126 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 SNORD115-44-201ENST00000365391 82 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-480P-201ENST00000384332 107 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 MT-TY-201ENST00000387409 66 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-175P-201ENST00000516896 107 ntBASIC-0.04□□□□□ -2.42
TRIM49D1C9J1S8 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms