Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 MIR516B1-201ENST00000385211 90 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 SNORD126-201ENST00000459475 77 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 RNU7-200P-201ENST00000516105 62 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 RNU7-13P-201ENST00000516413 62 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 U4.2-201ENST00000618561 85 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 RNU6-1313P-201ENST00000362622 102 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 RNU6-161P-201ENST00000363051 106 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.323-201ENST00000365157 109 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 RNU6-209P-201ENST00000384118 107 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 MIR216B-201ENST00000390186 82 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 RNU5E-3P-201ENST00000515913 68 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 uc_338.28-201ENST00000612082 187 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 RNA5SP245-201ENST00000364239 121 ntBASIC0□□□□□ -2.41
SHANK1Q9Y566 RNU6-187P-201ENST00000384139 106 ntBASIC0□□□□□ -2.41
SHANK1Q9Y566 RNU6-243P-201ENST00000391140 107 ntBASIC0□□□□□ -2.41
SHANK1Q9Y566 RNU6-394P-201ENST00000410735 107 ntBASIC0□□□□□ -2.41
SHANK1Q9Y566 SUMO1P3-201ENST00000439961 304 ntBASIC0□□□□□ -2.41
SHANK1Q9Y566 RNU6-1212P-201ENST00000517023 104 ntBASIC0□□□□□ -2.41
SHANK1Q9Y566 AL442128.1-201ENST00000615151 90 ntBASIC0□□□□□ -2.41
SHANK1Q9Y566 RNU6-235P-201ENST00000362644 107 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 MIR516A2-201ENST00000384888 90 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 MIR516A1-201ENST00000385033 90 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 SNORD110-201ENST00000408189 75 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 RNU6-781P-201ENST00000516377 101 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 MIR378F-201ENST00000578143 78 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 RNU6-170P-201ENST00000362832 104 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 SNORD36A-201ENST00000362874 73 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 SNORD38.1-201ENST00000363863 68 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
SHANK1Q9Y566 MIR539-201ENST00000365690 78 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 RNU6-929P-201ENST00000384429 107 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 RNU7-74P-201ENST00000459104 62 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 SNORD2-201ENST00000459163 69 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 AC069503.3-201ENST00000618674 145 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 RNU6-886P-201ENST00000384319 105 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 RNU6-291P-201ENST00000384720 107 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 RNU7-129P-201ENST00000516128 62 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 RNU6-850P-201ENST00000516934 103 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 SNORA70.25-201ENST00000612741 95 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 AP001362.1-201ENST00000625165 124 ntBASIC-0.02□□□□□ -2.41
SHANK1Q9Y566 SNORD115-24-201ENST00000363528 82 ntBASIC-0.03□□□□□ -2.41
SHANK1Q9Y566 RNU6V-201ENST00000384105 107 ntBASIC-0.03□□□□□ -2.41
SHANK1Q9Y566 RNU6-571P-201ENST00000384128 107 ntBASIC-0.03□□□□□ -2.41
SHANK1Q9Y566 MIR548D2-201ENST00000384955 97 ntBASIC-0.03□□□□□ -2.41
SHANK1Q9Y566 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.03□□□□□ -2.41
SHANK1Q9Y566 MIR3671-201ENST00000580455 88 ntBASIC-0.03□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 SNORA40-201ENST00000388090 126 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RNA5SP451-201ENST00000410588 110 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RNU7-165P-201ENST00000458864 60 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RPL39P34-201ENST00000477141 156 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RNU6-255P-201ENST00000516957 105 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 MTND5P41-201ENST00000517498 206 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 AL512310.12-203ENST00000640543 90 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RNU6-772P-201ENST00000516042 105 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 AP001328.1-201ENST00000528550 176 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 AL670379.3-201ENST00000605040 251 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RNU6-90P-201ENST00000606352 106 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 MIR1255B1-201ENST00000636325 63 ntBASIC-0.04□□□□□ -2.42
SHANK1Q9Y566 RNY4P6-201ENST00000363667 96 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 SNORD114-11-201ENST00000363738 75 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 RNY1P11-201ENST00000363759 113 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 SNORD115-44-201ENST00000365391 82 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 RNU7-6P-201ENST00000516845 62 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 AC025166.1-201ENST00000612411 163 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 MTND5P18-201ENST00000445624 1801 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 SNORD14C-201ENST00000365382 88 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 MIR145-201ENST00000384967 88 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 RNA5SP227-201ENST00000516184 113 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 MIR4679-2-201ENST00000578358 77 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 U7.6-201ENST00000610841 64 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 MIR1295B-201ENST00000636144 60 ntBASIC-0.05□□□□□ -2.42
SHANK1Q9Y566 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 SNORD63B-201ENST00000411005 70 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 RNU6-412P-201ENST00000516434 106 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 CR383656.4-201ENST00000546909 122 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 RNU6-957P-201ENST00000363652 99 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 MTND4LP9-201ENST00000427694 174 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 MIR3925-201ENST00000584674 77 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 AC084368.1-201ENST00000620935 65 ntBASIC-0.06□□□□□ -2.42
SHANK1Q9Y566 RNU6-915P-201ENST00000364943 103 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 RNA5SP128-201ENST00000365305 116 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 RNU6-756P-201ENST00000383997 107 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms