Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.14□□□□□ -2.07
ZC3H4Q9UPT8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.14□□□□□ -2.07
ZC3H4Q9UPT8 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
ZC3H4Q9UPT8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-1260P-201ENST00000362944 107 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 SNORD114-26-201ENST00000363543 72 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 SNORD101-201ENST00000384027 73 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 MIR599-201ENST00000385069 95 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 MIR519A1-201ENST00000385257 85 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 AC097635.1-201ENST00000450678 155 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 RNA5SP220-201ENST00000516298 104 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 ZNF209P-201ENST00000593450 2304 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 U6.100-201ENST00000636230 99 ntBASIC2.13□□□□□ -2.07
ZC3H4Q9UPT8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 Y_RNA.42-201ENST00000362660 108 ntBASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-535P-201ENST00000384722 107 ntBASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-788P-201ENST00000390967 104 ntBASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-448P-201ENST00000517052 107 ntBASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 MIR4676-201ENST00000583078 72 ntBASIC2.12□□□□□ -2.07
ZC3H4Q9UPT8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-1051P-201ENST00000365471 102 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-411P-201ENST00000384451 107 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 Y_RNA.532-201ENST00000384590 113 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 SNORD111-201ENST00000408139 94 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 RPS26P5-201ENST00000418544 335 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 AL591704.2-201ENST00000421658 181 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 RNA5SP102-201ENST00000516865 106 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 AC138907.6-201ENST00000568401 126 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 AC138869.1-201ENST00000568623 124 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 AC106800.4-201ENST00000614905 153 ntBASIC2.11□□□□□ -2.07
ZC3H4Q9UPT8 Y_RNA.12-201ENST00000362393 112 ntBASIC2.1□□□□□ -2.07
ZC3H4Q9UPT8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.1□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-70P-201ENST00000516438 60 ntBASIC2.1□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-902P-201ENST00000517212 91 ntBASIC2.1□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-664P-201ENST00000362381 107 ntBASIC2.09□□□□□ -2.08
ZC3H4Q9UPT8 RNY4P3-201ENST00000365254 95 ntBASIC2.09□□□□□ -2.08
ZC3H4Q9UPT8 Y_RNA.681-201ENST00000516445 113 ntBASIC2.09□□□□□ -2.08
ZC3H4Q9UPT8 AL078603.1-201ENST00000603824 313 ntBASIC2.09□□□□□ -2.08
ZC3H4Q9UPT8 MIR1297-201ENST00000637311 77 ntBASIC2.09□□□□□ -2.08
ZC3H4Q9UPT8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
ZC3H4Q9UPT8 Y_RNA.363-201ENST00000365529 113 ntBASIC2.08□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-910P-201ENST00000390844 107 ntBASIC2.08□□□□□ -2.08
ZC3H4Q9UPT8 MIR938-201ENST00000401216 83 ntBASIC2.08□□□□□ -2.08
ZC3H4Q9UPT8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.08□□□□□ -2.08
ZC3H4Q9UPT8 SNORD53B-201ENST00000577887 78 ntBASIC2.08□□□□□ -2.08
ZC3H4Q9UPT8 AL645939.4-201ENST00000604495 135 ntBASIC2.08□□□□□ -2.08
ZC3H4Q9UPT8 AC027335.2-201ENST00000624030 375 ntBASIC2.08□□□□□ -2.08
ZC3H4Q9UPT8 Y_RNA.207-201ENST00000364142 106 ntBASIC2.07□□□□□ -2.08
ZC3H4Q9UPT8 AC114801.3-201ENST00000510231 177 ntBASIC2.07□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-977P-201ENST00000516411 103 ntBASIC2.07□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-303P-201ENST00000517091 106 ntBASIC2.07□□□□□ -2.08
ZC3H4Q9UPT8 MIR4696-201ENST00000581431 70 ntBASIC2.07□□□□□ -2.08
ZC3H4Q9UPT8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.07□□□□□ -2.08
ZC3H4Q9UPT8 SNORA7.1-201ENST00000363750 139 ntBASIC2.06□□□□□ -2.08
ZC3H4Q9UPT8 Y_RNA.371-201ENST00000365591 113 ntBASIC2.06□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-291P-201ENST00000384720 107 ntBASIC2.06□□□□□ -2.08
ZC3H4Q9UPT8 snoU13.17-201ENST00000458802 104 ntBASIC2.06□□□□□ -2.08
ZC3H4Q9UPT8 RNU7-102P-201ENST00000458948 62 ntBASIC2.06□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-871P-201ENST00000516122 100 ntBASIC2.06□□□□□ -2.08
ZC3H4Q9UPT8 AL157834.3-201ENST00000615543 103 ntBASIC2.06□□□□□ -2.08
ZC3H4Q9UPT8 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.06□□□□□ -2.08
ZC3H4Q9UPT8 MIR100-201ENST00000385259 80 ntBASIC2.05□□□□□ -2.08
ZC3H4Q9UPT8 Y_RNA.596-201ENST00000410462 109 ntBASIC2.05□□□□□ -2.08
ZC3H4Q9UPT8 MIR4421-201ENST00000578133 69 ntBASIC2.05□□□□□ -2.08
ZC3H4Q9UPT8 MIR6779-201ENST00000617283 64 ntBASIC2.05□□□□□ -2.08
ZC3H4Q9UPT8 RNA5SP245-201ENST00000364239 121 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 SNORD48-201ENST00000364953 64 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 SNORA80D-201ENST00000384488 135 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 RNU7-21P-201ENST00000459430 62 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-523P-201ENST00000516304 54 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-1015P-201ENST00000517121 99 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 YWHAEP2-201ENST00000580066 112 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 YWHAEP3-201ENST00000582767 121 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 MIR3140-201ENST00000583685 90 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 MIR664A-201ENST00000626086 82 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
ZC3H4Q9UPT8 MIR520H-201ENST00000385126 88 ntBASIC2.03□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-1052P-201ENST00000411398 104 ntBASIC2.03□□□□□ -2.08
ZC3H4Q9UPT8 RNU7-90P-201ENST00000459216 62 ntBASIC2.03□□□□□ -2.08
ZC3H4Q9UPT8 RNU6-719P-201ENST00000516671 104 ntBASIC2.03□□□□□ -2.08
ZC3H4Q9UPT8 MIR6734-201ENST00000621166 68 ntBASIC2.03□□□□□ -2.08
ZC3H4Q9UPT8 RNU1-119P-201ENST00000391122 165 ntBASIC2.02□□□□□ -2.09
ZC3H4Q9UPT8 RNU6-1057P-201ENST00000517162 102 ntBASIC2.02□□□□□ -2.09
ZC3H4Q9UPT8 AC008608.1-201ENST00000603910 127 ntBASIC2.02□□□□□ -2.09
ZC3H4Q9UPT8 AC022709.1-201ENST00000615967 87 ntBASIC2.02□□□□□ -2.09
ZC3H4Q9UPT8 SNORA16.1-201ENST00000364597 132 ntBASIC2.01□□□□□ -2.09
ZC3H4Q9UPT8 MIR451A-201ENST00000385059 72 ntBASIC2.01□□□□□ -2.09
ZC3H4Q9UPT8 RNU6-935P-201ENST00000410371 100 ntBASIC2.01□□□□□ -2.09
ZC3H4Q9UPT8 SNORA8.1-201ENST00000384250 140 ntBASIC2□□□□□ -2.09
ZC3H4Q9UPT8 AC067940.1-201ENST00000458411 300 ntBASIC2□□□□□ -2.09
ZC3H4Q9UPT8 MIR4804-201ENST00000581683 73 ntBASIC2□□□□□ -2.09
ZC3H4Q9UPT8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ZC3H4Q9UPT8 MIR1-1-201ENST00000362147 71 ntBASIC1.99□□□□□ -2.09
ZC3H4Q9UPT8 RNU1-42P-201ENST00000364033 160 ntBASIC1.99□□□□□ -2.09
ZC3H4Q9UPT8 SNORD114-22-201ENST00000365423 72 ntBASIC1.99□□□□□ -2.09
ZC3H4Q9UPT8 MIR520F-201ENST00000384824 87 ntBASIC1.99□□□□□ -2.09
ZC3H4Q9UPT8 MIR222-201ENST00000384992 110 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 248.6 ms