Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNY4P3-201ENST00000365254 95 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 MIR519A1-201ENST00000385257 85 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 MIR1185-1-201ENST00000408598 86 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 SNORD93-201ENST00000408813 74 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 RPS27P16-201ENST00000425758 201 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 RNU7-195P-201ENST00000458793 62 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 TRAJ51-201ENST00000504127 63 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 MIR4491-201ENST00000581087 68 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 MIR4696-201ENST00000581431 70 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 MTRNR2L2-201ENST00000604882 87 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 MIR8074-201ENST00000615081 81 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 AC069503.3-201ENST00000618674 145 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 MIR8063-201ENST00000621930 81 ntBASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.87□□□□□ -2.11
LMCD1Q9NZU5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 RNU6-664P-201ENST00000362381 107 ntBASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 RNU6-403P-201ENST00000363163 104 ntBASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 Y_RNA.239-201ENST00000364444 113 ntBASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 Y_RNA.588-201ENST00000391254 102 ntBASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 RPL30P7-201ENST00000479312 323 ntBASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 AL133373.1-201ENST00000497098 94 ntBASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 AC097510.1-201ENST00000510945 133 ntBASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LMCD1Q9NZU5 MIR103A2-201ENST00000362154 78 ntBASIC1.85□□□□□ -2.11
LMCD1Q9NZU5 SNORD101-201ENST00000384027 73 ntBASIC1.84□□□□□ -2.11
LMCD1Q9NZU5 MT-TN-201ENST00000387400 73 ntBASIC1.84□□□□□ -2.11
LMCD1Q9NZU5 SNORD100-201ENST00000408573 76 ntBASIC1.84□□□□□ -2.11
LMCD1Q9NZU5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.84□□□□□ -2.11
LMCD1Q9NZU5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.84□□□□□ -2.11
LMCD1Q9NZU5 RNU6-1079P-201ENST00000362861 110 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 RNU6-1260P-201ENST00000362944 107 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 RNA5SP264-201ENST00000363115 107 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 RNU4-58P-201ENST00000363192 141 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 Y_RNA.258-201ENST00000364613 105 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 Y_RNA.536-201ENST00000384621 113 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 Y_RNA.540-201ENST00000384638 111 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 MIR7-2-201ENST00000384970 110 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 MT-TF-201ENST00000387314 71 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 AP003716.2-201ENST00000528260 108 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 MIR7978-201ENST00000636158 59 ntBASIC1.83□□□□□ -2.12
LMCD1Q9NZU5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LMCD1Q9NZU5 RNU6-446P-201ENST00000362827 106 ntBASIC1.82□□□□□ -2.12
LMCD1Q9NZU5 AC019176.1-201ENST00000518519 225 ntBASIC1.82□□□□□ -2.12
LMCD1Q9NZU5 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
LMCD1Q9NZU5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.82□□□□□ -2.12
LMCD1Q9NZU5 RNU6-369P-201ENST00000362515 102 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 RNA5SP363-201ENST00000365072 115 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 RNU1-36P-201ENST00000365130 165 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 RNU6-53P-201ENST00000365367 106 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 RNU6-42P-201ENST00000384165 107 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 Y_RNA.809-201ENST00000516058 95 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 RNU6-982P-201ENST00000516216 102 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 AC013244.2-201ENST00000603396 103 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 AC103810.8-201ENST00000607347 118 ntBASIC1.81□□□□□ -2.12
LMCD1Q9NZU5 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
LMCD1Q9NZU5 RNU6-935P-201ENST00000410371 100 ntBASIC1.8□□□□□ -2.12
LMCD1Q9NZU5 snoU13.21-201ENST00000459368 105 ntBASIC1.8□□□□□ -2.12
LMCD1Q9NZU5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.8□□□□□ -2.12
LMCD1Q9NZU5 MIR4452-201ENST00000583004 71 ntBASIC1.8□□□□□ -2.12
LMCD1Q9NZU5 AC023934.1-201ENST00000574529 2389 ntBASIC1.8□□□□□ -2.12
LMCD1Q9NZU5 MIR451A-201ENST00000385059 72 ntBASIC1.79□□□□□ -2.12
LMCD1Q9NZU5 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
LMCD1Q9NZU5 AL691482.2-201ENST00000457453 84 ntBASIC1.79□□□□□ -2.12
LMCD1Q9NZU5 snoU13.9-201ENST00000458927 103 ntBASIC1.79□□□□□ -2.12
LMCD1Q9NZU5 RNU6-1265P-201ENST00000516342 103 ntBASIC1.79□□□□□ -2.12
LMCD1Q9NZU5 AC092634.7-201ENST00000621022 103 ntBASIC1.79□□□□□ -2.12
LMCD1Q9NZU5 MIR101-2-201ENST00000362195 79 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 SNORA7.1-201ENST00000363750 139 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 SNORD113-4-201ENST00000364802 75 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 RNU6-382P-201ENST00000365181 106 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 RNU6-1052P-201ENST00000411398 104 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 MIR18B-201ENST00000454574 71 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 RNU1-123P-201ENST00000458950 160 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 RNU6-752P-201ENST00000516376 102 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 RNU6-719P-201ENST00000516671 104 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 Y_RNA.722-201ENST00000517279 114 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.78□□□□□ -2.12
LMCD1Q9NZU5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
LMCD1Q9NZU5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LMCD1Q9NZU5 SNORD1A-201ENST00000364968 72 ntBASIC1.77□□□□□ -2.13
LMCD1Q9NZU5 RNU6-580P-201ENST00000365159 107 ntBASIC1.77□□□□□ -2.13
LMCD1Q9NZU5 Y_RNA.375-201ENST00000365625 101 ntBASIC1.77□□□□□ -2.13
LMCD1Q9NZU5 SNORD83.1-201ENST00000411362 77 ntBASIC1.77□□□□□ -2.13
LMCD1Q9NZU5 RNA5SP220-201ENST00000516298 104 ntBASIC1.77□□□□□ -2.13
LMCD1Q9NZU5 MIR377-201ENST00000362145 69 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 RNA5SP192-201ENST00000364404 120 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 RNU6-1177P-201ENST00000391058 104 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 AC097635.1-201ENST00000450678 155 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 RNU7-185P-201ENST00000459215 60 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 RNU6-274P-201ENST00000459566 107 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 MIR548H5-201ENST00000580314 60 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 MIR466-201ENST00000580653 84 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 MIR3920-201ENST00000581751 86 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 259.3 ms