Protein–RNA interactions for Protein: Q9NZ43

USE1, Vesicle transport protein USE1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USE1Q9NZ43 MIR5591-201ENST00000578248 65 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 RNU6-643P-201ENST00000384018 107 ntBASIC-2.13□□□□□ -2.75
USE1Q9NZ43 RNU6-935P-201ENST00000410371 100 ntBASIC-2.13□□□□□ -2.75
USE1Q9NZ43 ELOCP20-201ENST00000422460 345 ntBASIC-2.13□□□□□ -2.75
USE1Q9NZ43 SNORD19B-201ENST00000459623 84 ntBASIC-2.13□□□□□ -2.75
USE1Q9NZ43 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.13□□□□□ -2.75
USE1Q9NZ43 MIR4770-201ENST00000579149 58 ntBASIC-2.13□□□□□ -2.75
USE1Q9NZ43 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.14□□□□□ -2.75
USE1Q9NZ43 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.14□□□□□ -2.75
USE1Q9NZ43 RNU6-806P-201ENST00000365147 105 ntBASIC-2.14□□□□□ -2.75
USE1Q9NZ43 RNU6-578P-201ENST00000390980 103 ntBASIC-2.14□□□□□ -2.75
USE1Q9NZ43 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.14□□□□□ -2.75
USE1Q9NZ43 AC026407.1-201ENST00000518369 204 ntBASIC-2.14□□□□□ -2.75
USE1Q9NZ43 AL353803.5-201ENST00000599815 141 ntBASIC-2.14□□□□□ -2.75
USE1Q9NZ43 U4.2-201ENST00000618561 85 ntBASIC-2.14□□□□□ -2.75
USE1Q9NZ43 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.15□□□□□ -2.75
USE1Q9NZ43 RNU6-521P-201ENST00000516663 105 ntBASIC-2.15□□□□□ -2.75
USE1Q9NZ43 AC080013.6-201ENST00000606185 215 ntBASIC-2.15□□□□□ -2.75
USE1Q9NZ43 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 RNU6-466P-201ENST00000391224 103 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 MTATP6P21-201ENST00000440681 189 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 RNU6-158P-201ENST00000517104 100 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 MIR6818-201ENST00000621576 65 ntBASIC-2.16□□□□□ -2.76
USE1Q9NZ43 SNORD114-3-201ENST00000364969 75 ntBASIC-2.17□□□□□ -2.76
USE1Q9NZ43 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.17□□□□□ -2.76
USE1Q9NZ43 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.17□□□□□ -2.76
USE1Q9NZ43 RNU6-337P-201ENST00000391243 106 ntBASIC-2.17□□□□□ -2.76
USE1Q9NZ43 RNU6-101P-201ENST00000410323 104 ntBASIC-2.17□□□□□ -2.76
USE1Q9NZ43 SNORD42B-201ENST00000458893 67 ntBASIC-2.17□□□□□ -2.76
USE1Q9NZ43 MIR4723-201ENST00000585070 81 ntBASIC-2.17□□□□□ -2.76
USE1Q9NZ43 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.18□□□□□ -2.76
USE1Q9NZ43 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.18□□□□□ -2.76
USE1Q9NZ43 MTND5P22-201ENST00000458380 195 ntBASIC-2.18□□□□□ -2.76
USE1Q9NZ43 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.18□□□□□ -2.76
USE1Q9NZ43 RNU6-235P-201ENST00000362644 107 ntBASIC-2.19□□□□□ -2.76
USE1Q9NZ43 MIR451A-201ENST00000385059 72 ntBASIC-2.19□□□□□ -2.76
USE1Q9NZ43 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.19□□□□□ -2.76
USE1Q9NZ43 RNU4-61P-201ENST00000411243 107 ntBASIC-2.19□□□□□ -2.76
USE1Q9NZ43 MTND3P22-201ENST00000510932 243 ntBASIC-2.19□□□□□ -2.76
USE1Q9NZ43 AC068339.1-201ENST00000526965 141 ntBASIC-2.19□□□□□ -2.76
USE1Q9NZ43 RNU6-623P-201ENST00000363143 105 ntBASIC-2.2□□□□□ -2.76
USE1Q9NZ43 AC022028.1-201ENST00000412054 408 ntBASIC-2.2□□□□□ -2.76
USE1Q9NZ43 AL132765.2-201ENST00000610812 351 ntBASIC-2.2□□□□□ -2.76
USE1Q9NZ43 MIR1246-201ENST00000636535 73 ntBASIC-2.2□□□□□ -2.76
USE1Q9NZ43 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 SNORA63.6-201ENST00000364921 119 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 MIR889-201ENST00000401280 79 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 AC113618.1-201ENST00000416747 285 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 AC021146.9-201ENST00000512503 156 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 RNY4P20-201ENST00000516678 93 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 AP002392.1-201ENST00000537692 208 ntBASIC-2.21□□□□□ -2.76
USE1Q9NZ43 RNU6-208P-201ENST00000362431 107 ntBASIC-2.22□□□□□ -2.76
USE1Q9NZ43 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.22□□□□□ -2.76
USE1Q9NZ43 AL589823.1-201ENST00000429577 183 ntBASIC-2.22□□□□□ -2.76
USE1Q9NZ43 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.22□□□□□ -2.76
USE1Q9NZ43 U3.27-201ENST00000391237 200 ntBASIC-2.23□□□□□ -2.77
USE1Q9NZ43 RNU7-6P-201ENST00000516845 62 ntBASIC-2.23□□□□□ -2.77
USE1Q9NZ43 YWHAEP3-201ENST00000582767 121 ntBASIC-2.23□□□□□ -2.77
USE1Q9NZ43 MIR4282-201ENST00000583613 67 ntBASIC-2.23□□□□□ -2.77
USE1Q9NZ43 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.24□□□□□ -2.77
USE1Q9NZ43 MIR4464-201ENST00000580818 92 ntBASIC-2.24□□□□□ -2.77
USE1Q9NZ43 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.24□□□□□ -2.77
USE1Q9NZ43 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.25□□□□□ -2.77
USE1Q9NZ43 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.25□□□□□ -2.77
USE1Q9NZ43 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.25□□□□□ -2.77
USE1Q9NZ43 FGF7P6-202ENST00000451282 293 ntBASIC-2.25□□□□□ -2.77
USE1Q9NZ43 FGF7P4-201ENST00000509595 295 ntBASIC-2.25□□□□□ -2.77
USE1Q9NZ43 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.25□□□□□ -2.77
USE1Q9NZ43 MIR4520-1-201ENST00000582609 70 ntBASIC-2.25□□□□□ -2.77
USE1Q9NZ43 U2.14-201ENST00000615943 113 ntBASIC-2.25□□□□□ -2.77
USE1Q9NZ43 RNY4P6-201ENST00000363667 96 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 RNU6-818P-201ENST00000364837 108 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 RNU6-746P-201ENST00000384112 109 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 RNU6-90P-201ENST00000606352 106 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 MIR6129-201ENST00000616087 109 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 MIR6502-201ENST00000617296 76 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 AC090971.5-201ENST00000621102 293 ntBASIC-2.26□□□□□ -2.77
USE1Q9NZ43 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.26□□□□□ -2.77
USE1Q9NZ43 RNU6-226P-201ENST00000363778 107 ntBASIC-2.27□□□□□ -2.77
USE1Q9NZ43 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.27□□□□□ -2.77
USE1Q9NZ43 MIR548G-201ENST00000408442 89 ntBASIC-2.27□□□□□ -2.77
USE1Q9NZ43 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.27□□□□□ -2.77
USE1Q9NZ43 SNORD63.1-201ENST00000516178 80 ntBASIC-2.27□□□□□ -2.77
USE1Q9NZ43 MIR4308-201ENST00000580634 81 ntBASIC-2.27□□□□□ -2.77
USE1Q9NZ43 SNORD115-33-201ENST00000363723 82 ntBASIC-2.28□□□□□ -2.77
USE1Q9NZ43 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.28□□□□□ -2.77
USE1Q9NZ43 SNORD115-19-201ENST00000363098 82 ntBASIC-2.29□□□□□ -2.78
USE1Q9NZ43 SNORD115-18-201ENST00000363293 82 ntBASIC-2.29□□□□□ -2.78
USE1Q9NZ43 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.29□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms