Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIR4773-1-201ENST00000637203 78 ntBASIC2.1□□□□□ -2.07
CUEDC1Q9NWM3 AP000553.5-201ENST00000641933 54 ntBASIC2.1□□□□□ -2.07
CUEDC1Q9NWM3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CUEDC1Q9NWM3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 AC244098.3-201ENST00000424803 96 ntBASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.09□□□□□ -2.08
CUEDC1Q9NWM3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-382P-201ENST00000365181 106 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 SNORD113.3-201ENST00000364630 78 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 MIR216B-201ENST00000390186 82 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 AC244505.6-201ENST00000452829 130 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 MIR3664-201ENST00000579074 99 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-934P-201ENST00000365154 107 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 MTND4LP1-201ENST00000446263 157 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 RNU7-24P-201ENST00000458867 62 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 snoU13.21-201ENST00000459368 105 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-902P-201ENST00000517212 91 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 MIR4781-201ENST00000585250 76 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 AL645939.4-201ENST00000604495 135 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 Y_RNA.258-201ENST00000364613 105 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-1187P-201ENST00000364771 110 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 MIR633-201ENST00000384821 98 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 SNORD83.1-201ENST00000411362 77 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-287P-201ENST00000516230 98 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-977P-201ENST00000516411 103 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-535P-201ENST00000384722 107 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 SNORD75.2-201ENST00000408784 58 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 ZNF355P-201ENST00000427301 3216 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 AL691482.2-201ENST00000457453 84 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 RN7SKP88-201ENST00000516847 250 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 AL512310.8-201ENST00000550183 120 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 AL078603.1-201ENST00000603824 313 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 AC008608.1-201ENST00000603910 127 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 7SK.8-201ENST00000612110 250 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 7SK.11-201ENST00000615477 250 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 7SK.13-201ENST00000622040 250 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 Y_RNA.118-201ENST00000363300 101 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-542P-201ENST00000516405 103 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 MIR4771-2-201ENST00000577758 74 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 MIR3920-201ENST00000581751 86 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 MIR4771-1-201ENST00000582617 74 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-668P-201ENST00000364180 107 ntBASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 AC036111.3-201ENST00000526389 112 ntBASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 RNU1-17P-201ENST00000363022 152 ntBASIC2□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP245-201ENST00000364239 121 ntBASIC2□□□□□ -2.09
CUEDC1Q9NWM3 Y_RNA.375-201ENST00000365625 101 ntBASIC2□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-495P-201ENST00000362995 107 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 SNORD111-201ENST00000408139 94 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RPS26P5-201ENST00000418544 335 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-982P-201ENST00000516216 102 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNU7-13P-201ENST00000516413 62 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 AL109933.3-201ENST00000619095 188 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 AC073869.9-201ENST00000641610 120 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-1039P-201ENST00000383931 107 ntBASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-364P-201ENST00000384387 107 ntBASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 MIR4676-201ENST00000583078 72 ntBASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-829P-201ENST00000363700 112 ntBASIC1.97□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms