Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RNU6-1194P-201ENST00000516208 104 ntBASIC1.85□□□□□ -2.11
CNTNAP4Q9C0A0 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
CNTNAP4Q9C0A0 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
CNTNAP4Q9C0A0 RNU4-58P-201ENST00000363192 141 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-154P-201ENST00000384306 106 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 MIR942-201ENST00000401111 86 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 RNA5SP61-201ENST00000516453 100 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 MIR3198-2-201ENST00000577868 80 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 MIR3664-201ENST00000579074 99 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 YWHAEP2-201ENST00000580066 112 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 YWHAEP3-201ENST00000582767 121 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 SNORD92-201ENST00000585078 85 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.84□□□□□ -2.12
CNTNAP4Q9C0A0 MIR154-201ENST00000385243 84 ntBASIC1.83□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-205P-201ENST00000390858 107 ntBASIC1.83□□□□□ -2.12
CNTNAP4Q9C0A0 AL606490.4-201ENST00000423117 127 ntBASIC1.83□□□□□ -2.12
CNTNAP4Q9C0A0 MIR96-201ENST00000362288 78 ntBASIC1.82□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-243P-201ENST00000391140 107 ntBASIC1.82□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.82□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-291P-201ENST00000384720 107 ntBASIC1.81□□□□□ -2.12
CNTNAP4Q9C0A0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CNTNAP4Q9C0A0 MIR548U-201ENST00000390728 81 ntBASIC1.81□□□□□ -2.12
CNTNAP4Q9C0A0 MIR1304-201ENST00000408243 91 ntBASIC1.81□□□□□ -2.12
CNTNAP4Q9C0A0 SNORD63B-201ENST00000411005 70 ntBASIC1.81□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-1051P-201ENST00000365471 102 ntBASIC1.8□□□□□ -2.12
CNTNAP4Q9C0A0 SNORA8.1-201ENST00000384250 140 ntBASIC1.8□□□□□ -2.12
CNTNAP4Q9C0A0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-466P-201ENST00000391224 103 ntBASIC1.8□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-531P-201ENST00000516694 104 ntBASIC1.8□□□□□ -2.12
CNTNAP4Q9C0A0 SNORA25.16-201ENST00000516741 121 ntBASIC1.8□□□□□ -2.12
CNTNAP4Q9C0A0 MIR4491-201ENST00000581087 68 ntBASIC1.8□□□□□ -2.12
CNTNAP4Q9C0A0 RNU7-10P-201ENST00000607194 63 ntBASIC1.8□□□□□ -2.12
CNTNAP4Q9C0A0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-340P-201ENST00000364005 107 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 Y_RNA.207-201ENST00000364142 106 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 RNU1-78P-201ENST00000391248 165 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 SNORD93-201ENST00000408813 74 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 MIR3140-201ENST00000583685 90 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 MIR3660-201ENST00000584845 100 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 MIR6078-201ENST00000611069 100 ntBASIC1.79□□□□□ -2.12
CNTNAP4Q9C0A0 Y_RNA.371-201ENST00000365591 113 ntBASIC1.78□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-499P-201ENST00000365615 107 ntBASIC1.78□□□□□ -2.12
CNTNAP4Q9C0A0 SNORD45A-201ENST00000384512 84 ntBASIC1.78□□□□□ -2.12
CNTNAP4Q9C0A0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.78□□□□□ -2.12
CNTNAP4Q9C0A0 AC092628.1-201ENST00000436250 252 ntBASIC1.78□□□□□ -2.12
CNTNAP4Q9C0A0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.78□□□□□ -2.12
CNTNAP4Q9C0A0 MIR3937-201ENST00000580135 106 ntBASIC1.78□□□□□ -2.12
CNTNAP4Q9C0A0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CNTNAP4Q9C0A0 RNU1-36P-201ENST00000365130 165 ntBASIC1.77□□□□□ -2.13
CNTNAP4Q9C0A0 SNORD116-24-201ENST00000384549 92 ntBASIC1.77□□□□□ -2.13
CNTNAP4Q9C0A0 RNU6-630P-201ENST00000391258 106 ntBASIC1.77□□□□□ -2.13
CNTNAP4Q9C0A0 TRAJ51-201ENST00000504127 63 ntBASIC1.77□□□□□ -2.13
CNTNAP4Q9C0A0 AL356379.1-201ENST00000414105 126 ntBASIC1.76□□□□□ -2.13
CNTNAP4Q9C0A0 RNU7-195P-201ENST00000458793 62 ntBASIC1.76□□□□□ -2.13
CNTNAP4Q9C0A0 RPS29P1-201ENST00000465274 159 ntBASIC1.76□□□□□ -2.13
CNTNAP4Q9C0A0 MIR4422-201ENST00000581938 83 ntBASIC1.76□□□□□ -2.13
CNTNAP4Q9C0A0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.76□□□□□ -2.13
CNTNAP4Q9C0A0 SNORD115-22-201ENST00000364456 82 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 SNORD113.3-201ENST00000364630 78 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 Y_RNA.443-201ENST00000384135 111 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 SNORA24B-201ENST00000384176 131 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 MIR520E-201ENST00000384867 87 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 AL512310.8-201ENST00000550183 120 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 MIR548H5-201ENST00000580314 60 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 AL096840.1-201ENST00000603287 93 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 U6.100-201ENST00000636230 99 ntBASIC1.75□□□□□ -2.13
CNTNAP4Q9C0A0 RNU6-824P-201ENST00000363724 104 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 RNU6-654P-201ENST00000364373 107 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 MIR519A1-201ENST00000385257 85 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 MIR320A-201ENST00000385302 82 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 SNORD100-201ENST00000408573 76 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 Y_RNA.606-201ENST00000410579 103 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 RNU6-765P-201ENST00000516916 99 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 TRDV1-202ENST00000621643 102 ntBASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.74□□□□□ -2.13
CNTNAP4Q9C0A0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 SNORA25.4-201ENST00000363666 124 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 RNU6-681P-201ENST00000364012 104 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 RNU1-93P-201ENST00000364704 169 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 AC093423.1-201ENST00000440817 142 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 RNU7-185P-201ENST00000459215 60 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 AC008834.1-201ENST00000511612 175 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 RNU6-165P-201ENST00000517170 99 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 MIR4696-201ENST00000581431 70 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 AL109933.3-201ENST00000619095 188 ntBASIC1.73□□□□□ -2.13
CNTNAP4Q9C0A0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
CNTNAP4Q9C0A0 MIR101-2-201ENST00000362195 79 ntBASIC1.72□□□□□ -2.13
CNTNAP4Q9C0A0 Y_RNA.56-201ENST00000362798 112 ntBASIC1.72□□□□□ -2.13
CNTNAP4Q9C0A0 SNORA40.6-201ENST00000391153 128 ntBASIC1.72□□□□□ -2.13
CNTNAP4Q9C0A0 SNORD111-201ENST00000408139 94 ntBASIC1.72□□□□□ -2.13
CNTNAP4Q9C0A0 RNA5SP95-201ENST00000410319 137 ntBASIC1.72□□□□□ -2.13
CNTNAP4Q9C0A0 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
CNTNAP4Q9C0A0 MIR3675-201ENST00000583661 73 ntBASIC1.72□□□□□ -2.13
CNTNAP4Q9C0A0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms