Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIRLET7B-201ENST00000385140 83 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 RNU7-164P-201ENST00000459221 62 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 RNU6-976P-201ENST00000516086 111 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.68□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.68□□□□□ -2.68
UPF3BQ9BZI7 SNORD27-201ENST00000363981 72 ntBASIC-1.68□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.68□□□□□ -2.68
UPF3BQ9BZI7 SNORD115-22-201ENST00000364456 82 ntBASIC-1.68□□□□□ -2.68
UPF3BQ9BZI7 RNU7-123P-201ENST00000515911 60 ntBASIC-1.68□□□□□ -2.68
UPF3BQ9BZI7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
UPF3BQ9BZI7 AC021443.1-201ENST00000604478 211 ntBASIC-1.68□□□□□ -2.68
UPF3BQ9BZI7 SNORD36A-201ENST00000362874 73 ntBASIC-1.69□□□□□ -2.68
UPF3BQ9BZI7 MIR34C-201ENST00000384831 77 ntBASIC-1.69□□□□□ -2.68
UPF3BQ9BZI7 RNU6-466P-201ENST00000391224 103 ntBASIC-1.69□□□□□ -2.68
UPF3BQ9BZI7 AC022028.1-201ENST00000412054 408 ntBASIC-1.69□□□□□ -2.68
UPF3BQ9BZI7 SNORD2.1-201ENST00000458762 69 ntBASIC-1.69□□□□□ -2.68
UPF3BQ9BZI7 RNU6-983P-201ENST00000516004 103 ntBASIC-1.69□□□□□ -2.68
UPF3BQ9BZI7 AC138907.4-201ENST00000570107 226 ntBASIC-1.69□□□□□ -2.68
UPF3BQ9BZI7 AC090617.8-201ENST00000623339 167 ntBASIC-1.69□□□□□ -2.68
UPF3BQ9BZI7 RNU6-208P-201ENST00000362431 107 ntBASIC-1.7□□□□□ -2.68
UPF3BQ9BZI7 RNY1P11-201ENST00000363759 113 ntBASIC-1.7□□□□□ -2.68
UPF3BQ9BZI7 RNU6-616P-201ENST00000384353 107 ntBASIC-1.7□□□□□ -2.68
UPF3BQ9BZI7 RNU6-243P-201ENST00000391140 107 ntBASIC-1.7□□□□□ -2.68
UPF3BQ9BZI7 AL121914.1-201ENST00000450188 156 ntBASIC-1.7□□□□□ -2.68
UPF3BQ9BZI7 RNU6-240P-201ENST00000516098 97 ntBASIC-1.7□□□□□ -2.68
UPF3BQ9BZI7 MIR4308-201ENST00000580634 81 ntBASIC-1.7□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.71□□□□□ -2.68
UPF3BQ9BZI7 RNU6-103P-201ENST00000363686 107 ntBASIC-1.71□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.71□□□□□ -2.68
UPF3BQ9BZI7 AC138393.2-201ENST00000414742 246 ntBASIC-1.71□□□□□ -2.68
UPF3BQ9BZI7 RNU6-277P-201ENST00000516272 106 ntBASIC-1.71□□□□□ -2.68
UPF3BQ9BZI7 RNY4P7-201ENST00000364600 96 ntBASIC-1.72□□□□□ -2.68
UPF3BQ9BZI7 RNU6-54P-201ENST00000365563 107 ntBASIC-1.72□□□□□ -2.68
UPF3BQ9BZI7 MIR507-201ENST00000385234 94 ntBASIC-1.72□□□□□ -2.68
UPF3BQ9BZI7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.72□□□□□ -2.68
UPF3BQ9BZI7 RNU4-17P-201ENST00000365598 141 ntBASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 AL078595.1-201ENST00000404458 226 ntBASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 RPL35AP4-201ENST00000412007 102 ntBASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 AP002795.1-201ENST00000534879 84 ntBASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 AL365265.1-201ENST00000621045 234 ntBASIC-1.73□□□□□ -2.69
UPF3BQ9BZI7 RNU6-957P-201ENST00000363652 99 ntBASIC-1.74□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.74□□□□□ -2.69
UPF3BQ9BZI7 SNORD114-4-201ENST00000363962 75 ntBASIC-1.74□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.74□□□□□ -2.69
UPF3BQ9BZI7 SNORD38.2-201ENST00000384470 69 ntBASIC-1.74□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 SNORD115-19-201ENST00000363098 82 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 SNORD115-18-201ENST00000363293 82 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 RNU6-164P-201ENST00000364604 103 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 SNORD115-17-201ENST00000364612 82 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 SNORD75.2-201ENST00000408784 58 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 SNORD42B-201ENST00000458893 67 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 AC073869.6-201ENST00000640656 341 ntBASIC-1.75□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.76□□□□□ -2.69
UPF3BQ9BZI7 SNORD101-201ENST00000384027 73 ntBASIC-1.76□□□□□ -2.69
UPF3BQ9BZI7 MIR1252-201ENST00000408861 65 ntBASIC-1.76□□□□□ -2.69
UPF3BQ9BZI7 RNU6-651P-201ENST00000411040 105 ntBASIC-1.76□□□□□ -2.69
UPF3BQ9BZI7 MIR4756-201ENST00000577874 78 ntBASIC-1.76□□□□□ -2.69
UPF3BQ9BZI7 MIR4696-201ENST00000581431 70 ntBASIC-1.76□□□□□ -2.69
UPF3BQ9BZI7 MIR4744-201ENST00000581563 82 ntBASIC-1.76□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.77□□□□□ -2.69
UPF3BQ9BZI7 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.77□□□□□ -2.69
UPF3BQ9BZI7 SNORA26.4-201ENST00000391188 123 ntBASIC-1.77□□□□□ -2.69
UPF3BQ9BZI7 AC113618.1-201ENST00000416747 285 ntBASIC-1.77□□□□□ -2.69
UPF3BQ9BZI7 RNU6-732P-201ENST00000516033 103 ntBASIC-1.77□□□□□ -2.69
UPF3BQ9BZI7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.77□□□□□ -2.69
UPF3BQ9BZI7 RNU6-664P-201ENST00000362381 107 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 RNU6-235P-201ENST00000362644 107 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 SNORD116-2-201ENST00000384274 95 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 MT-TL1-201ENST00000386347 75 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 RNU6-823P-201ENST00000391042 103 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 FGF7P6-202ENST00000451282 293 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 SNORA40.15-201ENST00000516884 107 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 AC080013.6-201ENST00000606185 215 ntBASIC-1.78□□□□□ -2.69
UPF3BQ9BZI7 MIR335-201ENST00000362173 94 ntBASIC-1.79□□□□□ -2.7
UPF3BQ9BZI7 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.79□□□□□ -2.7
UPF3BQ9BZI7 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.79□□□□□ -2.7
UPF3BQ9BZI7 SNORD19B-201ENST00000459623 84 ntBASIC-1.79□□□□□ -2.7
UPF3BQ9BZI7 AC108019.1-201ENST00000512540 175 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms