Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 uc_338.28-201ENST00000612082 187 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 AC012531.4-201ENST00000616509 177 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 MIR409-201ENST00000362237 79 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU6-1313P-201ENST00000362622 102 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 Y_RNA.98-201ENST00000363109 102 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNY4P6-201ENST00000363667 96 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU6-865P-201ENST00000364772 107 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU4-45P-201ENST00000365469 141 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU6-1014P-201ENST00000383940 103 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 Y_RNA.467-201ENST00000384297 102 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU6-1064P-201ENST00000410626 104 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU2-51P-201ENST00000410708 197 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RPL39P34-201ENST00000477141 156 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU6-479P-201ENST00000516348 105 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU6-537P-201ENST00000517277 103 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 RNU7-161P-201ENST00000517289 62 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 MIR5009-201ENST00000578736 100 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 MIR4777-201ENST00000583710 86 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 AL670379.3-201ENST00000605040 251 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 AP001362.1-201ENST00000625165 124 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 AL512310.12-203ENST00000640543 90 ntBASIC0.27□□□□□ -2.37
CDX2Q99626 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 MIR450A1-201ENST00000362262 91 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU4-58P-201ENST00000363192 141 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-832P-201ENST00000363319 107 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNA5SP368-201ENST00000364298 116 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 Y_RNA.281-201ENST00000364774 94 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-1107P-201ENST00000364817 104 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-1325P-201ENST00000364905 105 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-44P-201ENST00000384045 107 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-409P-201ENST00000384114 104 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-106P-201ENST00000384405 107 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 SNORD28-201ENST00000384706 75 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 MIR590-201ENST00000385008 97 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 SNORD63B-201ENST00000411005 70 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 AC069271.1-201ENST00000445577 156 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 SPINT5P-201ENST00000448174 155 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-313P-201ENST00000516317 112 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-765P-201ENST00000516916 99 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 IGLVI-20-201ENST00000519296 130 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 MIR4679-2-201ENST00000578358 77 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 MIR548AG2-201ENST00000581228 64 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU6-86P-201ENST00000606534 107 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 RNU1-29P-201ENST00000606574 126 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 AL442128.1-201ENST00000615151 90 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 AC244669.1-204ENST00000621564 178 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 AC025521.1-201ENST00000621624 286 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 U6.95-201ENST00000636931 70 ntBASIC0.26□□□□□ -2.37
CDX2Q99626 SNORD115-24-201ENST00000363528 82 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 Y_RNA.173-201ENST00000363776 113 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 Y_RNA.291-201ENST00000364886 113 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 Y_RNA.323-201ENST00000365157 109 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 RNA5SP117-201ENST00000365294 118 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 Y_RNA.567-201ENST00000384736 106 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 MIR181B2-201ENST00000385004 89 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 MIR548I2-201ENST00000408348 149 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 MIR548G-201ENST00000408442 89 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 snoU13.11-201ENST00000459219 104 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 RNU6-62P-201ENST00000516526 102 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 RNA5SP47-201ENST00000517230 109 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 AC141557.1-201ENST00000540982 400 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 MIR4493-201ENST00000584016 73 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 MIR7107-201ENST00000611489 80 ntBASIC0.25□□□□□ -2.37
CDX2Q99626 Y_RNA.56-201ENST00000362798 112 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 SNORD36A-201ENST00000362874 73 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 RNU6-957P-201ENST00000363652 99 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 RNU6-215P-201ENST00000365169 102 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 RNU6-524P-201ENST00000384270 107 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 SNORA8.2-201ENST00000384372 139 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 RNU6-880P-201ENST00000384526 107 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 Y_RNA.709-201ENST00000516952 92 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 RNU6-789P-201ENST00000517105 102 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 MTND5P40-201ENST00000559945 246 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
CDX2Q99626 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CDX2Q99626 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 MIR101-2-201ENST00000362195 79 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNU6-170P-201ENST00000362832 104 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNY3P2-201ENST00000362918 102 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNA5SP403-201ENST00000363598 108 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNU6-1244P-201ENST00000363614 108 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 Y_RNA.163-201ENST00000363702 113 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 Y_RNA.507-201ENST00000384500 99 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 MIR599-201ENST00000385069 95 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNU6-644P-201ENST00000391155 98 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 AC244505.6-201ENST00000452829 130 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNU7-104P-201ENST00000459398 79 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNU6-863P-201ENST00000515989 104 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 Y_RNA.659-201ENST00000515994 113 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNU6-904P-201ENST00000516206 101 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNU6-162P-201ENST00000516228 103 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 RNA5SP268-201ENST00000516828 124 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 SNORA70.25-201ENST00000612741 95 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 U6.100-201ENST00000636230 99 ntBASIC0.23□□□□□ -2.37
CDX2Q99626 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 730.3 ms