Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PHOX2BQ99453 RNU6-977P-201ENST00000516411 103 ntBASIC2.21□□□□□ -2.06
PHOX2BQ99453 AC023827.1-201ENST00000569247 97 ntBASIC2.21□□□□□ -2.06
PHOX2BQ99453 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
PHOX2BQ99453 MIR6504-201ENST00000613520 61 ntBASIC2.21□□□□□ -2.06
PHOX2BQ99453 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PHOX2BQ99453 Y_RNA.371-201ENST00000365591 113 ntBASIC2.2□□□□□ -2.06
PHOX2BQ99453 RNU6-649P-201ENST00000384463 107 ntBASIC2.2□□□□□ -2.06
PHOX2BQ99453 MIR154-201ENST00000385243 84 ntBASIC2.2□□□□□ -2.06
PHOX2BQ99453 RNU1-119P-201ENST00000391122 165 ntBASIC2.2□□□□□ -2.06
PHOX2BQ99453 AC067940.1-201ENST00000458411 300 ntBASIC2.2□□□□□ -2.06
PHOX2BQ99453 RNU7-102P-201ENST00000458948 62 ntBASIC2.2□□□□□ -2.06
PHOX2BQ99453 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PHOX2BQ99453 MIR1-1-201ENST00000362147 71 ntBASIC2.19□□□□□ -2.06
PHOX2BQ99453 Y_RNA.174-201ENST00000363781 105 ntBASIC2.19□□□□□ -2.06
PHOX2BQ99453 RNA5SP190-201ENST00000365222 118 ntBASIC2.19□□□□□ -2.06
PHOX2BQ99453 SNORA24B-201ENST00000384176 131 ntBASIC2.19□□□□□ -2.06
PHOX2BQ99453 MIR216B-201ENST00000390186 82 ntBASIC2.19□□□□□ -2.06
PHOX2BQ99453 AC125388.1-201ENST00000459631 156 ntBASIC2.19□□□□□ -2.06
PHOX2BQ99453 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
PHOX2BQ99453 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.19□□□□□ -2.06
PHOX2BQ99453 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
PHOX2BQ99453 MIR451A-201ENST00000385059 72 ntBASIC2.18□□□□□ -2.06
PHOX2BQ99453 SNORD12-201ENST00000391002 90 ntBASIC2.18□□□□□ -2.06
PHOX2BQ99453 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.18□□□□□ -2.06
PHOX2BQ99453 MIR4804-201ENST00000581683 73 ntBASIC2.18□□□□□ -2.06
PHOX2BQ99453 MIR6734-201ENST00000621166 68 ntBASIC2.18□□□□□ -2.06
PHOX2BQ99453 Y_RNA.363-201ENST00000365529 113 ntBASIC2.17□□□□□ -2.06
PHOX2BQ99453 MIR100-201ENST00000385259 80 ntBASIC2.17□□□□□ -2.06
PHOX2BQ99453 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PHOX2BQ99453 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
PHOX2BQ99453 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.17□□□□□ -2.06
PHOX2BQ99453 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
PHOX2BQ99453 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PHOX2BQ99453 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.16□□□□□ -2.06
PHOX2BQ99453 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PHOX2BQ99453 RNU6-154P-201ENST00000384306 106 ntBASIC2.16□□□□□ -2.06
PHOX2BQ99453 RNU6-1241P-201ENST00000384536 107 ntBASIC2.16□□□□□ -2.06
PHOX2BQ99453 RNU6-910P-201ENST00000390844 107 ntBASIC2.16□□□□□ -2.06
PHOX2BQ99453 SNORD79.1-201ENST00000516069 84 ntBASIC2.16□□□□□ -2.06
PHOX2BQ99453 MIR3675-201ENST00000583661 73 ntBASIC2.16□□□□□ -2.06
PHOX2BQ99453 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.16□□□□□ -2.06
PHOX2BQ99453 Y_RNA.178-201ENST00000363832 102 ntBASIC2.15□□□□□ -2.07
PHOX2BQ99453 RNU7-56P-201ENST00000458744 62 ntBASIC2.15□□□□□ -2.07
PHOX2BQ99453 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
PHOX2BQ99453 MIR5089-201ENST00000580047 84 ntBASIC2.15□□□□□ -2.07
PHOX2BQ99453 MIR3140-201ENST00000583685 90 ntBASIC2.15□□□□□ -2.07
PHOX2BQ99453 AL078603.1-201ENST00000603824 313 ntBASIC2.15□□□□□ -2.07
PHOX2BQ99453 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PHOX2BQ99453 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
PHOX2BQ99453 SNORA70.22-201ENST00000517160 124 ntBASIC2.14□□□□□ -2.07
PHOX2BQ99453 MIR4303-201ENST00000581299 66 ntBASIC2.14□□□□□ -2.07
PHOX2BQ99453 MIR4452-201ENST00000583004 71 ntBASIC2.14□□□□□ -2.07
PHOX2BQ99453 U6.81-201ENST00000612550 106 ntBASIC2.14□□□□□ -2.07
PHOX2BQ99453 RNU7-13P-201ENST00000516413 62 ntBASIC2.13□□□□□ -2.07
PHOX2BQ99453 MIR8053-201ENST00000613344 75 ntBASIC2.13□□□□□ -2.07
PHOX2BQ99453 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PHOX2BQ99453 RNA5SP245-201ENST00000364239 121 ntBASIC2.12□□□□□ -2.07
PHOX2BQ99453 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
PHOX2BQ99453 SNORD30.1-201ENST00000391309 70 ntBASIC2.12□□□□□ -2.07
PHOX2BQ99453 RNU6-752P-201ENST00000516376 102 ntBASIC2.12□□□□□ -2.07
PHOX2BQ99453 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.12□□□□□ -2.07
PHOX2BQ99453 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PHOX2BQ99453 RNU6-287P-201ENST00000516230 98 ntBASIC2.11□□□□□ -2.07
PHOX2BQ99453 RNA5SP220-201ENST00000516298 104 ntBASIC2.11□□□□□ -2.07
PHOX2BQ99453 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
PHOX2BQ99453 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.11□□□□□ -2.07
PHOX2BQ99453 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
PHOX2BQ99453 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PHOX2BQ99453 RNU4-52P-201ENST00000384209 138 ntBASIC2.1□□□□□ -2.07
PHOX2BQ99453 RNU6-1177P-201ENST00000391058 104 ntBASIC2.1□□□□□ -2.07
PHOX2BQ99453 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
PHOX2BQ99453 RNU6-135P-201ENST00000516769 101 ntBASIC2.1□□□□□ -2.07
PHOX2BQ99453 AL136317.1-201ENST00000612653 226 ntBASIC2.1□□□□□ -2.07
PHOX2BQ99453 MIR664A-201ENST00000626086 82 ntBASIC2.1□□□□□ -2.07
PHOX2BQ99453 RNU6-369P-201ENST00000362515 102 ntBASIC2.09□□□□□ -2.07
PHOX2BQ99453 MIR520F-201ENST00000384824 87 ntBASIC2.09□□□□□ -2.07
PHOX2BQ99453 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.09□□□□□ -2.07
PHOX2BQ99453 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.09□□□□□ -2.07
PHOX2BQ99453 RNU6-274P-201ENST00000459566 107 ntBASIC2.09□□□□□ -2.07
PHOX2BQ99453 MIR6766-201ENST00000622641 72 ntBASIC2.09□□□□□ -2.07
PHOX2BQ99453 ZNF209P-201ENST00000593450 2304 ntBASIC2.09□□□□□ -2.07
PHOX2BQ99453 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PHOX2BQ99453 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PHOX2BQ99453 Y_RNA.340-201ENST00000365330 92 ntBASIC2.08□□□□□ -2.08
PHOX2BQ99453 RNU6-540P-201ENST00000384622 101 ntBASIC2.08□□□□□ -2.08
PHOX2BQ99453 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.08□□□□□ -2.08
PHOX2BQ99453 MIR1827-201ENST00000408549 66 ntBASIC2.08□□□□□ -2.08
PHOX2BQ99453 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
PHOX2BQ99453 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.08□□□□□ -2.08
PHOX2BQ99453 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PHOX2BQ99453 PVT1_3.1-201ENST00000620853 95 ntBASIC2.08□□□□□ -2.08
PHOX2BQ99453 Y_RNA.205-201ENST00000364128 113 ntBASIC2.07□□□□□ -2.08
PHOX2BQ99453 Y_RNA.327-201ENST00000365201 102 ntBASIC2.07□□□□□ -2.08
PHOX2BQ99453 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
PHOX2BQ99453 RNU7-95P-201ENST00000459222 64 ntBASIC2.07□□□□□ -2.08
PHOX2BQ99453 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
PHOX2BQ99453 SNORA25.15-201ENST00000516487 89 ntBASIC2.07□□□□□ -2.08
PHOX2BQ99453 MIR8081-201ENST00000611533 95 ntBASIC2.07□□□□□ -2.08
PHOX2BQ99453 uc_338.16-201ENST00000621804 95 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms