Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 RNA5SP403-201ENST00000363598 108 ntBASIC2.57□□□□□ -2
MS4A4AQ96JQ5 Y_RNA.164-201ENST00000363709 102 ntBASIC2.57□□□□□ -2
MS4A4AQ96JQ5 RNU6-994P-201ENST00000410507 111 ntBASIC2.57□□□□□ -2
MS4A4AQ96JQ5 AL591704.2-201ENST00000421658 181 ntBASIC2.57□□□□□ -2
MS4A4AQ96JQ5 AL512310.8-201ENST00000550183 120 ntBASIC2.57□□□□□ -2
MS4A4AQ96JQ5 MIR548O2-201ENST00000616090 70 ntBASIC2.57□□□□□ -2
MS4A4AQ96JQ5 SNORA75.2-201ENST00000391138 150 ntBASIC2.56□□□□□ -2
MS4A4AQ96JQ5 SNORA75.3-201ENST00000391231 150 ntBASIC2.56□□□□□ -2
MS4A4AQ96JQ5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.56□□□□□ -2
MS4A4AQ96JQ5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
MS4A4AQ96JQ5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.55□□□□□ -2
MS4A4AQ96JQ5 RNA5SP215-201ENST00000363440 122 ntBASIC2.55□□□□□ -2
MS4A4AQ96JQ5 SNORA67.1-201ENST00000364749 141 ntBASIC2.55□□□□□ -2
MS4A4AQ96JQ5 RNU7-74P-201ENST00000459104 62 ntBASIC2.55□□□□□ -2
MS4A4AQ96JQ5 AC048334.1-201ENST00000477975 159 ntBASIC2.55□□□□□ -2
MS4A4AQ96JQ5 SCARNA21.1-201ENST00000515996 128 ntBASIC2.55□□□□□ -2
MS4A4AQ96JQ5 RNA5SP200-201ENST00000516360 103 ntBASIC2.55□□□□□ -2
MS4A4AQ96JQ5 NAMPTP3-201ENST00000569273 224 ntBASIC2.55□□□□□ -2
MS4A4AQ96JQ5 MIR4804-201ENST00000581683 73 ntBASIC2.55□□□□□ -2
MS4A4AQ96JQ5 RNU6-1079P-201ENST00000362861 110 ntBASIC2.54□□□□□ -2
MS4A4AQ96JQ5 RNU1-17P-201ENST00000363022 152 ntBASIC2.54□□□□□ -2
MS4A4AQ96JQ5 RNU6-645P-201ENST00000364649 106 ntBASIC2.54□□□□□ -2
MS4A4AQ96JQ5 AC067940.1-201ENST00000458411 300 ntBASIC2.54□□□□□ -2
MS4A4AQ96JQ5 MIR4299-201ENST00000577899 72 ntBASIC2.54□□□□□ -2
MS4A4AQ96JQ5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
MS4A4AQ96JQ5 RNU6-302P-201ENST00000365249 107 ntBASIC2.53□□□□□ -2
MS4A4AQ96JQ5 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
MS4A4AQ96JQ5 MIR3657-201ENST00000584818 117 ntBASIC2.53□□□□□ -2
MS4A4AQ96JQ5 MIR6845-201ENST00000613182 61 ntBASIC2.53□□□□□ -2
MS4A4AQ96JQ5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 RNA5SP192-201ENST00000364404 120 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 U8.9-201ENST00000365667 134 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 SNORA31.2-201ENST00000516019 134 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 RN7SKP88-201ENST00000516847 250 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 AC023827.1-201ENST00000569247 97 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 MIR4498-201ENST00000577599 66 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 MIR548AG2-201ENST00000581228 64 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 7SK.8-201ENST00000612110 250 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 7SK.11-201ENST00000615477 250 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 7SK.13-201ENST00000622040 250 ntBASIC2.52□□□□□ -2.01
MS4A4AQ96JQ5 ZNF355P-201ENST00000427301 3216 ntBASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 RNU6-260P-201ENST00000384092 107 ntBASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 MIR203A-201ENST00000384836 110 ntBASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 RNU6-808P-201ENST00000391233 108 ntBASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 RNU7-56P-201ENST00000458744 62 ntBASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 SNORA31.14-201ENST00000516728 116 ntBASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 Y_RNA.722-201ENST00000517279 114 ntBASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 uc_338.16-201ENST00000621804 95 ntBASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.51□□□□□ -2.01
MS4A4AQ96JQ5 Y_RNA.226-201ENST00000364337 114 ntBASIC2.5□□□□□ -2.01
MS4A4AQ96JQ5 SNORA80D-201ENST00000384488 135 ntBASIC2.5□□□□□ -2.01
MS4A4AQ96JQ5 MIR100-201ENST00000385259 80 ntBASIC2.5□□□□□ -2.01
MS4A4AQ96JQ5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
MS4A4AQ96JQ5 AC067863.3-201ENST00000624172 122 ntBASIC2.5□□□□□ -2.01
MS4A4AQ96JQ5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.49□□□□□ -2.01
MS4A4AQ96JQ5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
MS4A4AQ96JQ5 MIR1-1-201ENST00000362147 71 ntBASIC2.49□□□□□ -2.01
MS4A4AQ96JQ5 Y_RNA.32-201ENST00000362589 110 ntBASIC2.49□□□□□ -2.01
MS4A4AQ96JQ5 SNORA2.1-201ENST00000363089 137 ntBASIC2.49□□□□□ -2.01
MS4A4AQ96JQ5 RNU7-90P-201ENST00000459216 62 ntBASIC2.49□□□□□ -2.01
MS4A4AQ96JQ5 RNU7-104P-201ENST00000459398 79 ntBASIC2.49□□□□□ -2.01
MS4A4AQ96JQ5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
MS4A4AQ96JQ5 RNA5SP299-201ENST00000391203 116 ntBASIC2.48□□□□□ -2.01
MS4A4AQ96JQ5 RNU7-21P-201ENST00000459430 62 ntBASIC2.48□□□□□ -2.01
MS4A4AQ96JQ5 RNU6-135P-201ENST00000516769 101 ntBASIC2.48□□□□□ -2.01
MS4A4AQ96JQ5 RNU7-161P-201ENST00000517289 62 ntBASIC2.48□□□□□ -2.01
MS4A4AQ96JQ5 MIR3198-2-201ENST00000577868 80 ntBASIC2.48□□□□□ -2.01
MS4A4AQ96JQ5 MIR6132-201ENST00000622083 109 ntBASIC2.48□□□□□ -2.01
MS4A4AQ96JQ5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.47□□□□□ -2.01
MS4A4AQ96JQ5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MS4A4AQ96JQ5 MIR519E-201ENST00000385075 84 ntBASIC2.46□□□□□ -2.02
MS4A4AQ96JQ5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.46□□□□□ -2.02
MS4A4AQ96JQ5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 RNU6-54P-201ENST00000365563 107 ntBASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 SNORA48.3-201ENST00000391081 134 ntBASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 SNORA17.3-201ENST00000391159 129 ntBASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 SUMO2P12-201ENST00000405924 140 ntBASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 RNU6-1053P-201ENST00000515930 101 ntBASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 AL157834.3-201ENST00000615543 103 ntBASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 MIR7111-201ENST00000619751 72 ntBASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
MS4A4AQ96JQ5 MIR520F-201ENST00000384824 87 ntBASIC2.44□□□□□ -2.02
MS4A4AQ96JQ5 AC108667.1-201ENST00000428618 249 ntBASIC2.44□□□□□ -2.02
MS4A4AQ96JQ5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
MS4A4AQ96JQ5 RNU6-369P-201ENST00000362515 102 ntBASIC2.43□□□□□ -2.02
MS4A4AQ96JQ5 RNA5SP182-201ENST00000516064 82 ntBASIC2.43□□□□□ -2.02
MS4A4AQ96JQ5 RNU6-122P-201ENST00000516818 107 ntBASIC2.43□□□□□ -2.02
MS4A4AQ96JQ5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MS4A4AQ96JQ5 Y_RNA.250-201ENST00000364542 110 ntBASIC2.42□□□□□ -2.02
MS4A4AQ96JQ5 RNU6V-201ENST00000384105 107 ntBASIC2.42□□□□□ -2.02
MS4A4AQ96JQ5 MIR583-201ENST00000384846 75 ntBASIC2.42□□□□□ -2.02
MS4A4AQ96JQ5 MIR4422-201ENST00000581938 83 ntBASIC2.42□□□□□ -2.02
MS4A4AQ96JQ5 MIR3938-201ENST00000582157 103 ntBASIC2.42□□□□□ -2.02
MS4A4AQ96JQ5 MIR4781-201ENST00000585250 76 ntBASIC2.42□□□□□ -2.02
MS4A4AQ96JQ5 RNU6-92P-201ENST00000605893 104 ntBASIC2.42□□□□□ -2.02
MS4A4AQ96JQ5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
MS4A4AQ96JQ5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
MS4A4AQ96JQ5 MIR17-201ENST00000385012 84 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 247.4 ms