Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LRCH3Q96II8 RNU6-645P-201ENST00000364649 106 ntBASIC2.44□□□□□ -2.02
LRCH3Q96II8 RNU6-936P-201ENST00000384005 107 ntBASIC2.44□□□□□ -2.02
LRCH3Q96II8 MIR583-201ENST00000384846 75 ntBASIC2.44□□□□□ -2.02
LRCH3Q96II8 MIR221-201ENST00000385135 110 ntBASIC2.44□□□□□ -2.02
LRCH3Q96II8 RNU6-808P-201ENST00000391233 108 ntBASIC2.44□□□□□ -2.02
LRCH3Q96II8 MIR548AG2-201ENST00000581228 64 ntBASIC2.44□□□□□ -2.02
LRCH3Q96II8 RNA5SP393-201ENST00000363423 117 ntBASIC2.43□□□□□ -2.02
LRCH3Q96II8 SNORD113-4-201ENST00000364802 75 ntBASIC2.43□□□□□ -2.02
LRCH3Q96II8 RNU6-1335P-201ENST00000365426 107 ntBASIC2.43□□□□□ -2.02
LRCH3Q96II8 RNU7-13P-201ENST00000516413 62 ntBASIC2.43□□□□□ -2.02
LRCH3Q96II8 SNORD113.3-201ENST00000364630 78 ntBASIC2.42□□□□□ -2.02
LRCH3Q96II8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
LRCH3Q96II8 RNA5SP299-201ENST00000391203 116 ntBASIC2.42□□□□□ -2.02
LRCH3Q96II8 MIR5194-201ENST00000582634 120 ntBASIC2.42□□□□□ -2.02
LRCH3Q96II8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LRCH3Q96II8 RNU6-1126P-201ENST00000384002 107 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 RNA5SP212-201ENST00000391223 107 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 AP1B1P2-201ENST00000416196 106 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 SUMO1P4-201ENST00000429430 302 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 AC055731.1-201ENST00000474387 401 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 AC036111.3-201ENST00000526389 112 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 MIR5007-201ENST00000583098 95 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 MIR3657-201ENST00000584818 117 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 AL359851.1-201ENST00000569460 4997 ntBASIC2.41□□□□□ -2.02
LRCH3Q96II8 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
LRCH3Q96II8 Y_RNA.330-201ENST00000365230 109 ntBASIC2.4□□□□□ -2.03
LRCH3Q96II8 Y_RNA.374-201ENST00000365606 101 ntBASIC2.4□□□□□ -2.03
LRCH3Q96II8 MIR3664-201ENST00000579074 99 ntBASIC2.4□□□□□ -2.03
LRCH3Q96II8 MIR4676-201ENST00000583078 72 ntBASIC2.4□□□□□ -2.03
LRCH3Q96II8 BX248123.2-201ENST00000606318 124 ntBASIC2.4□□□□□ -2.03
LRCH3Q96II8 MIR8063-201ENST00000621930 81 ntBASIC2.4□□□□□ -2.03
LRCH3Q96II8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LRCH3Q96II8 MIR21-201ENST00000362134 72 ntBASIC2.39□□□□□ -2.03
LRCH3Q96II8 RNU4-62P-201ENST00000410125 130 ntBASIC2.39□□□□□ -2.03
LRCH3Q96II8 RNA5SP402-201ENST00000517148 110 ntBASIC2.39□□□□□ -2.03
LRCH3Q96II8 MIR4446-201ENST00000578505 67 ntBASIC2.39□□□□□ -2.03
LRCH3Q96II8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LRCH3Q96II8 RNU6-54P-201ENST00000365563 107 ntBASIC2.38□□□□□ -2.03
LRCH3Q96II8 RNU6-364P-201ENST00000384387 107 ntBASIC2.38□□□□□ -2.03
LRCH3Q96II8 RNU6-1184P-201ENST00000384588 108 ntBASIC2.38□□□□□ -2.03
LRCH3Q96II8 MIR1276-201ENST00000408707 83 ntBASIC2.38□□□□□ -2.03
LRCH3Q96II8 SNORD13-201ENST00000459299 104 ntBASIC2.38□□□□□ -2.03
LRCH3Q96II8 RNU7-40P-201ENST00000516397 64 ntBASIC2.38□□□□□ -2.03
LRCH3Q96II8 AC245884.12-201ENST00000615364 59 ntBASIC2.38□□□□□ -2.03
LRCH3Q96II8 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
LRCH3Q96II8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.38□□□□□ -2.03
LRCH3Q96II8 MIR216B-201ENST00000390186 82 ntBASIC2.37□□□□□ -2.03
LRCH3Q96II8 SNORD23.1-201ENST00000408212 104 ntBASIC2.37□□□□□ -2.03
LRCH3Q96II8 RPS26P5-201ENST00000418544 335 ntBASIC2.37□□□□□ -2.03
LRCH3Q96II8 RNU6-122P-201ENST00000516818 107 ntBASIC2.37□□□□□ -2.03
LRCH3Q96II8 RNU6-165P-201ENST00000517170 99 ntBASIC2.37□□□□□ -2.03
LRCH3Q96II8 MIR3938-201ENST00000582157 103 ntBASIC2.37□□□□□ -2.03
LRCH3Q96II8 MIR8074-201ENST00000615081 81 ntBASIC2.37□□□□□ -2.03
LRCH3Q96II8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LRCH3Q96II8 RNU7-102P-201ENST00000458948 62 ntBASIC2.36□□□□□ -2.03
LRCH3Q96II8 MIR548O2-201ENST00000616090 70 ntBASIC2.36□□□□□ -2.03
LRCH3Q96II8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRCH3Q96II8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRCH3Q96II8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRCH3Q96II8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.35□□□□□ -2.03
LRCH3Q96II8 RNA5SP403-201ENST00000363598 108 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 RNA5SP190-201ENST00000365222 118 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 RNA5SP117-201ENST00000365294 118 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 RNU6-42P-201ENST00000384165 107 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 MIR938-201ENST00000401216 83 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 AC019176.1-201ENST00000518519 225 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 AL049779.4-201ENST00000604500 156 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 RMST_2.1-201ENST00000617263 136 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 AC027335.2-201ENST00000624030 375 ntBASIC2.35□□□□□ -2.03
LRCH3Q96II8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LRCH3Q96II8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
LRCH3Q96II8 RNA5SP215-201ENST00000363440 122 ntBASIC2.34□□□□□ -2.03
LRCH3Q96II8 SNORD114-26-201ENST00000363543 72 ntBASIC2.34□□□□□ -2.03
LRCH3Q96II8 MIR6504-201ENST00000613520 61 ntBASIC2.34□□□□□ -2.03
LRCH3Q96II8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
LRCH3Q96II8 MIR302D-201ENST00000362275 68 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 SNORD115-24-201ENST00000363528 82 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 SNORA67.1-201ENST00000364749 141 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 RNU6-260P-201ENST00000384092 107 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 MIR617-201ENST00000385030 97 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 SNORA75.1-201ENST00000391130 148 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 SNORA75.2-201ENST00000391138 150 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 SNORA75.3-201ENST00000391231 150 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 RNU6-656P-201ENST00000516785 107 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 RNU7-161P-201ENST00000517289 62 ntBASIC2.33□□□□□ -2.04
LRCH3Q96II8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LRCH3Q96II8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LRCH3Q96II8 Y_RNA.32-201ENST00000362589 110 ntBASIC2.32□□□□□ -2.04
LRCH3Q96II8 SUMO2P12-201ENST00000405924 140 ntBASIC2.32□□□□□ -2.04
LRCH3Q96II8 SNORD42B-201ENST00000458893 67 ntBASIC2.32□□□□□ -2.04
LRCH3Q96II8 RNU6-92P-201ENST00000605893 104 ntBASIC2.32□□□□□ -2.04
LRCH3Q96II8 AL773524.1-201ENST00000614065 229 ntBASIC2.32□□□□□ -2.04
LRCH3Q96II8 MIR519E-201ENST00000385075 84 ntBASIC2.31□□□□□ -2.04
LRCH3Q96II8 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
LRCH3Q96II8 SNORA31.14-201ENST00000516728 116 ntBASIC2.31□□□□□ -2.04
LRCH3Q96II8 SNORA40.17-201ENST00000517256 115 ntBASIC2.31□□□□□ -2.04
LRCH3Q96II8 AC023827.1-201ENST00000569247 97 ntBASIC2.31□□□□□ -2.04
LRCH3Q96II8 AC106800.4-201ENST00000614905 153 ntBASIC2.31□□□□□ -2.04
LRCH3Q96II8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 237.1 ms