Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SNORA44-201ENST00000384584 132 ntBASIC2.56□□□□□ -2
MS4A3Q96HJ5 RNU6-246P-201ENST00000384702 107 ntBASIC2.56□□□□□ -2
MS4A3Q96HJ5 RNU6-172P-201ENST00000411000 93 ntBASIC2.56□□□□□ -2
MS4A3Q96HJ5 AC108938.1-201ENST00000451204 136 ntBASIC2.56□□□□□ -2
MS4A3Q96HJ5 SCARNA17.3-201ENST00000516381 125 ntBASIC2.56□□□□□ -2
MS4A3Q96HJ5 CYP3A54P-201ENST00000566950 75 ntBASIC2.56□□□□□ -2
MS4A3Q96HJ5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MS4A3Q96HJ5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
MS4A3Q96HJ5 RNA5SP492-201ENST00000411330 114 ntBASIC2.55□□□□□ -2
MS4A3Q96HJ5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.55□□□□□ -2
MS4A3Q96HJ5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.54□□□□□ -2
MS4A3Q96HJ5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MS4A3Q96HJ5 RNU6-726P-201ENST00000364680 107 ntBASIC2.54□□□□□ -2
MS4A3Q96HJ5 EEF1A1P41-201ENST00000414667 207 ntBASIC2.54□□□□□ -2
MS4A3Q96HJ5 snoU13.9-201ENST00000458927 103 ntBASIC2.54□□□□□ -2
MS4A3Q96HJ5 MIR3937-201ENST00000580135 106 ntBASIC2.54□□□□□ -2
MS4A3Q96HJ5 MIR4490-201ENST00000582647 84 ntBASIC2.54□□□□□ -2
MS4A3Q96HJ5 MIR4713-201ENST00000582691 75 ntBASIC2.54□□□□□ -2
MS4A3Q96HJ5 RNU6-986P-201ENST00000363133 102 ntBASIC2.53□□□□□ -2
MS4A3Q96HJ5 SNORA8.2-201ENST00000384372 139 ntBASIC2.53□□□□□ -2
MS4A3Q96HJ5 MIR644A-201ENST00000385262 94 ntBASIC2.53□□□□□ -2
MS4A3Q96HJ5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.53□□□□□ -2
MS4A3Q96HJ5 HMGN2P23-201ENST00000456759 269 ntBASIC2.53□□□□□ -2
MS4A3Q96HJ5 RNU7-21P-201ENST00000459430 62 ntBASIC2.53□□□□□ -2
MS4A3Q96HJ5 RNU6-518P-201ENST00000516056 96 ntBASIC2.53□□□□□ -2
MS4A3Q96HJ5 SCARNA13-201ENST00000516672 275 ntBASIC2.53□□□□□ -2
MS4A3Q96HJ5 AL512310.8-201ENST00000550183 120 ntBASIC2.53□□□□□ -2
MS4A3Q96HJ5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
MS4A3Q96HJ5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MS4A3Q96HJ5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MS4A3Q96HJ5 SNORD1B-201ENST00000363091 84 ntBASIC2.52□□□□□ -2.01
MS4A3Q96HJ5 SNORA9.2-201ENST00000365361 133 ntBASIC2.52□□□□□ -2.01
MS4A3Q96HJ5 7SK.11-201ENST00000615477 250 ntBASIC2.52□□□□□ -2.01
MS4A3Q96HJ5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
MS4A3Q96HJ5 Y_RNA.363-201ENST00000365529 113 ntBASIC2.51□□□□□ -2.01
MS4A3Q96HJ5 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
MS4A3Q96HJ5 RNU6-469P-201ENST00000516253 101 ntBASIC2.51□□□□□ -2.01
MS4A3Q96HJ5 SNORA44.1-201ENST00000517031 108 ntBASIC2.51□□□□□ -2.01
MS4A3Q96HJ5 AC107016.2-201ENST00000547968 190 ntBASIC2.51□□□□□ -2.01
MS4A3Q96HJ5 AC015712.3-201ENST00000559380 164 ntBASIC2.51□□□□□ -2.01
MS4A3Q96HJ5 MIR548AL-201ENST00000578416 97 ntBASIC2.51□□□□□ -2.01
MS4A3Q96HJ5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.5□□□□□ -2.01
MS4A3Q96HJ5 RNU6-269P-201ENST00000391077 97 ntBASIC2.5□□□□□ -2.01
MS4A3Q96HJ5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.5□□□□□ -2.01
MS4A3Q96HJ5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.5□□□□□ -2.01
MS4A3Q96HJ5 AC006386.2-201ENST00000624491 75 ntBASIC2.5□□□□□ -2.01
MS4A3Q96HJ5 AC012005.1-201ENST00000624575 75 ntBASIC2.5□□□□□ -2.01
MS4A3Q96HJ5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
MS4A3Q96HJ5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
MS4A3Q96HJ5 RNU7-90P-201ENST00000459216 62 ntBASIC2.49□□□□□ -2.01
MS4A3Q96HJ5 AC002350.1-201ENST00000490759 375 ntBASIC2.49□□□□□ -2.01
MS4A3Q96HJ5 RMST_2.1-201ENST00000617263 136 ntBASIC2.49□□□□□ -2.01
MS4A3Q96HJ5 U6.96-201ENST00000636425 70 ntBASIC2.49□□□□□ -2.01
MS4A3Q96HJ5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.49□□□□□ -2.01
MS4A3Q96HJ5 Y_RNA.407-201ENST00000383986 113 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 SNORA80D-201ENST00000384488 135 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 MIR548E-201ENST00000408287 88 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 MIR1827-201ENST00000408549 66 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 RNA5SP484-201ENST00000458857 111 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 MIR4287-201ENST00000579398 78 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
MS4A3Q96HJ5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.47□□□□□ -2.01
MS4A3Q96HJ5 RNU6-851P-201ENST00000384565 107 ntBASIC2.47□□□□□ -2.01
MS4A3Q96HJ5 MIR652-201ENST00000385278 98 ntBASIC2.47□□□□□ -2.01
MS4A3Q96HJ5 COTL1P1-201ENST00000422309 375 ntBASIC2.47□□□□□ -2.01
MS4A3Q96HJ5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.47□□□□□ -2.01
MS4A3Q96HJ5 RNA5SP402-201ENST00000517148 110 ntBASIC2.47□□□□□ -2.01
MS4A3Q96HJ5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MS4A3Q96HJ5 MIR582-201ENST00000365731 98 ntBASIC2.46□□□□□ -2.02
MS4A3Q96HJ5 MIR512-1-201ENST00000384913 84 ntBASIC2.46□□□□□ -2.02
MS4A3Q96HJ5 AL033523.1-201ENST00000605153 153 ntBASIC2.46□□□□□ -2.02
MS4A3Q96HJ5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.45□□□□□ -2.02
MS4A3Q96HJ5 RNU6-924P-201ENST00000362926 108 ntBASIC2.45□□□□□ -2.02
MS4A3Q96HJ5 RNU6-716P-201ENST00000365621 103 ntBASIC2.45□□□□□ -2.02
MS4A3Q96HJ5 MIR934-201ENST00000401241 83 ntBASIC2.45□□□□□ -2.02
MS4A3Q96HJ5 SNORD23.1-201ENST00000408212 104 ntBASIC2.45□□□□□ -2.02
MS4A3Q96HJ5 FO624990.1-201ENST00000636373 85 ntBASIC2.45□□□□□ -2.02
MS4A3Q96HJ5 U6.103-201ENST00000637085 61 ntBASIC2.45□□□□□ -2.02
MS4A3Q96HJ5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MS4A3Q96HJ5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 MIR429-201ENST00000362106 83 ntBASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 AC087499.2-201ENST00000432861 149 ntBASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 RN7SKP88-201ENST00000516847 250 ntBASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 RNA5SP47-201ENST00000517230 109 ntBASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 AC079600.2-201ENST00000550076 130 ntBASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 7SK.8-201ENST00000612110 250 ntBASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 AC245884.12-201ENST00000615364 59 ntBASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 7SK.13-201ENST00000622040 250 ntBASIC2.44□□□□□ -2.02
MS4A3Q96HJ5 SNORA80A-201ENST00000363922 136 ntBASIC2.43□□□□□ -2.02
MS4A3Q96HJ5 MIR7106-201ENST00000612419 65 ntBASIC2.43□□□□□ -2.02
MS4A3Q96HJ5 AC010297.1-201ENST00000623948 149 ntBASIC2.43□□□□□ -2.02
MS4A3Q96HJ5 MIR519A2-201ENST00000384990 87 ntBASIC2.42□□□□□ -2.02
MS4A3Q96HJ5 HMGN2P38-201ENST00000423806 265 ntBASIC2.42□□□□□ -2.02
MS4A3Q96HJ5 RNU7-160P-201ENST00000516660 62 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 1085.2 ms