Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NKX2-3Q8TAU0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
NKX2-3Q8TAU0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 MIR378A-201ENST00000362177 66 ntBASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 RNA5SP215-201ENST00000363440 122 ntBASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 RNA5SP160-201ENST00000364866 120 ntBASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 AC244505.6-201ENST00000452829 130 ntBASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 RNU6-122P-201ENST00000516818 107 ntBASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 AL773524.1-201ENST00000614065 229 ntBASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 AL359851.1-201ENST00000569460 4997 ntBASIC2.46□□□□□ -2.02
NKX2-3Q8TAU0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.45□□□□□ -2.02
NKX2-3Q8TAU0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.45□□□□□ -2.02
NKX2-3Q8TAU0 RNA5SP338-201ENST00000410495 85 ntBASIC2.45□□□□□ -2.02
NKX2-3Q8TAU0 RNU6-321P-201ENST00000410912 106 ntBASIC2.45□□□□□ -2.02
NKX2-3Q8TAU0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.45□□□□□ -2.02
NKX2-3Q8TAU0 AC015688.6-201ENST00000577737 104 ntBASIC2.45□□□□□ -2.02
NKX2-3Q8TAU0 MIR6509-201ENST00000614603 85 ntBASIC2.45□□□□□ -2.02
NKX2-3Q8TAU0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NKX2-3Q8TAU0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
NKX2-3Q8TAU0 MIR125B2-201ENST00000385128 89 ntBASIC2.44□□□□□ -2.02
NKX2-3Q8TAU0 RNU6-947P-201ENST00000516264 106 ntBASIC2.44□□□□□ -2.02
NKX2-3Q8TAU0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NKX2-3Q8TAU0 SNORD113-4-201ENST00000364802 75 ntBASIC2.43□□□□□ -2.02
NKX2-3Q8TAU0 MIR8070-201ENST00000616510 88 ntBASIC2.43□□□□□ -2.02
NKX2-3Q8TAU0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 RNA5SP276-201ENST00000362580 94 ntBASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 RNU6-645P-201ENST00000364649 106 ntBASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 SNORA48.3-201ENST00000391081 134 ntBASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 MIR4713-201ENST00000582691 75 ntBASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 AL645939.4-201ENST00000604495 135 ntBASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-3Q8TAU0 RNA5SP245-201ENST00000364239 121 ntBASIC2.41□□□□□ -2.02
NKX2-3Q8TAU0 MIR7-2-201ENST00000384970 110 ntBASIC2.41□□□□□ -2.02
NKX2-3Q8TAU0 RNA5SP299-201ENST00000391203 116 ntBASIC2.41□□□□□ -2.02
NKX2-3Q8TAU0 AP000553.5-201ENST00000641933 54 ntBASIC2.41□□□□□ -2.02
NKX2-3Q8TAU0 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
NKX2-3Q8TAU0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NKX2-3Q8TAU0 RNU6-535P-201ENST00000384722 107 ntBASIC2.4□□□□□ -2.03
NKX2-3Q8TAU0 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
NKX2-3Q8TAU0 snoU13.21-201ENST00000459368 105 ntBASIC2.4□□□□□ -2.03
NKX2-3Q8TAU0 AC079804.2-201ENST00000490376 200 ntBASIC2.4□□□□□ -2.03
NKX2-3Q8TAU0 AC008608.1-201ENST00000603910 127 ntBASIC2.4□□□□□ -2.03
NKX2-3Q8TAU0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.39□□□□□ -2.03
NKX2-3Q8TAU0 RNU6-934P-201ENST00000365154 107 ntBASIC2.39□□□□□ -2.03
NKX2-3Q8TAU0 MIR4287-201ENST00000579398 78 ntBASIC2.39□□□□□ -2.03
NKX2-3Q8TAU0 RNU6-92P-201ENST00000605893 104 ntBASIC2.39□□□□□ -2.03
NKX2-3Q8TAU0 MIR489-201ENST00000384923 84 ntBASIC2.38□□□□□ -2.03
NKX2-3Q8TAU0 AC003989.2-201ENST00000440224 169 ntBASIC2.38□□□□□ -2.03
NKX2-3Q8TAU0 TRMT112P2-201ENST00000512910 132 ntBASIC2.38□□□□□ -2.03
NKX2-3Q8TAU0 SNORA77B-201ENST00000578179 125 ntBASIC2.38□□□□□ -2.03
NKX2-3Q8TAU0 MIR3657-201ENST00000584818 117 ntBASIC2.38□□□□□ -2.03
NKX2-3Q8TAU0 AL359821.1-201ENST00000605519 182 ntBASIC2.38□□□□□ -2.03
NKX2-3Q8TAU0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NKX2-3Q8TAU0 SNORD113.3-201ENST00000364630 78 ntBASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 RNU6-260P-201ENST00000384092 107 ntBASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 SUMO2P12-201ENST00000405924 140 ntBASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 SNORD83.1-201ENST00000411362 77 ntBASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 snoU13.18-201ENST00000459483 104 ntBASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 RNU7-13P-201ENST00000516413 62 ntBASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 NAMPTP3-201ENST00000569273 224 ntBASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-3Q8TAU0 RNU6-302P-201ENST00000365249 107 ntBASIC2.36□□□□□ -2.03
NKX2-3Q8TAU0 RNU6-1126P-201ENST00000384002 107 ntBASIC2.36□□□□□ -2.03
NKX2-3Q8TAU0 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
NKX2-3Q8TAU0 MIR548O2-201ENST00000616090 70 ntBASIC2.36□□□□□ -2.03
NKX2-3Q8TAU0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NKX2-3Q8TAU0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
NKX2-3Q8TAU0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
NKX2-3Q8TAU0 SNORA6-201ENST00000384033 151 ntBASIC2.35□□□□□ -2.03
NKX2-3Q8TAU0 RNU6-717P-201ENST00000459076 104 ntBASIC2.35□□□□□ -2.03
NKX2-3Q8TAU0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NKX2-3Q8TAU0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX2-3Q8TAU0 MIR203A-201ENST00000384836 110 ntBASIC2.34□□□□□ -2.03
NKX2-3Q8TAU0 MIR17-201ENST00000385012 84 ntBASIC2.34□□□□□ -2.03
NKX2-3Q8TAU0 SNORA17.3-201ENST00000391159 129 ntBASIC2.34□□□□□ -2.03
NKX2-3Q8TAU0 MIR4299-201ENST00000577899 72 ntBASIC2.34□□□□□ -2.03
NKX2-3Q8TAU0 MIR3664-201ENST00000579074 99 ntBASIC2.34□□□□□ -2.03
NKX2-3Q8TAU0 MIR548AG2-201ENST00000581228 64 ntBASIC2.34□□□□□ -2.03
NKX2-3Q8TAU0 MIR8074-201ENST00000615081 81 ntBASIC2.34□□□□□ -2.03
NKX2-3Q8TAU0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
NKX2-3Q8TAU0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NKX2-3Q8TAU0 MIR617-201ENST00000385030 97 ntBASIC2.33□□□□□ -2.04
NKX2-3Q8TAU0 RNU6-1089P-201ENST00000516473 104 ntBASIC2.33□□□□□ -2.04
NKX2-3Q8TAU0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX2-3Q8TAU0 SNORA2.1-201ENST00000363089 137 ntBASIC2.32□□□□□ -2.04
NKX2-3Q8TAU0 RNA5SP403-201ENST00000363598 108 ntBASIC2.32□□□□□ -2.04
NKX2-3Q8TAU0 RNA5SP233-201ENST00000459153 113 ntBASIC2.32□□□□□ -2.04
NKX2-3Q8TAU0 RNU6-656P-201ENST00000516785 107 ntBASIC2.32□□□□□ -2.04
NKX2-3Q8TAU0 MIR4771-2-201ENST00000577758 74 ntBASIC2.32□□□□□ -2.04
NKX2-3Q8TAU0 MIR4771-1-201ENST00000582617 74 ntBASIC2.32□□□□□ -2.04
NKX2-3Q8TAU0 MIR6739-201ENST00000622461 75 ntBASIC2.32□□□□□ -2.04
NKX2-3Q8TAU0 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
NKX2-3Q8TAU0 SNORD60.1-201ENST00000362451 73 ntBASIC2.31□□□□□ -2.04
NKX2-3Q8TAU0 RNU6-439P-201ENST00000384188 106 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms