Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 RNU6-508P-201ENST00000363231 103 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 RNU6-818P-201ENST00000364837 108 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 RNY4P20-201ENST00000516678 93 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 MIR4696-201ENST00000581431 70 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.3□□□□□ -2.62
CCDC112Q8NEF3 RNU6-235P-201ENST00000362644 107 ntBASIC-1.31□□□□□ -2.62
CCDC112Q8NEF3 RNU6-493P-201ENST00000391321 108 ntBASIC-1.31□□□□□ -2.62
CCDC112Q8NEF3 AL500527.2-201ENST00000454105 95 ntBASIC-1.31□□□□□ -2.62
CCDC112Q8NEF3 RNU6-664P-201ENST00000362381 107 ntBASIC-1.32□□□□□ -2.62
CCDC112Q8NEF3 SNORD115-19-201ENST00000363098 82 ntBASIC-1.32□□□□□ -2.62
CCDC112Q8NEF3 SNORD115-18-201ENST00000363293 82 ntBASIC-1.32□□□□□ -2.62
CCDC112Q8NEF3 SNORD115-17-201ENST00000364612 82 ntBASIC-1.32□□□□□ -2.62
CCDC112Q8NEF3 SNORD101-201ENST00000384027 73 ntBASIC-1.32□□□□□ -2.62
CCDC112Q8NEF3 MIR1468-201ENST00000410600 86 ntBASIC-1.32□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.33□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.33□□□□□ -2.62
CCDC112Q8NEF3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.33□□□□□ -2.62
CCDC112Q8NEF3 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.33□□□□□ -2.62
CCDC112Q8NEF3 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.33□□□□□ -2.62
CCDC112Q8NEF3 MIR4680-201ENST00000580906 66 ntBASIC-1.33□□□□□ -2.62
CCDC112Q8NEF3 MIR4324-201ENST00000584846 72 ntBASIC-1.33□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 RNU6-54P-201ENST00000365563 107 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 MTND1P19-201ENST00000511780 315 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 RNU7-6P-201ENST00000516845 62 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 RNU6-762P-201ENST00000517107 102 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 MIR4308-201ENST00000580634 81 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 AL137067.1-201ENST00000615933 120 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 U6.106-201ENST00000636360 105 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 MIR4320-201ENST00000636981 65 ntBASIC-1.34□□□□□ -2.62
CCDC112Q8NEF3 RNU6-309P-201ENST00000364573 106 ntBASIC-1.35□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.35□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 SNORD114-4-201ENST00000363962 75 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 RNY4P28-201ENST00000365281 93 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 RNU6-905P-201ENST00000384434 107 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 MT-TI-201ENST00000387365 69 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 SNORA75.5-201ENST00000391291 81 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 AP002392.1-201ENST00000537692 208 ntBASIC-1.36□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.37□□□□□ -2.63
CCDC112Q8NEF3 MIR147A-201ENST00000385079 72 ntBASIC-1.37□□□□□ -2.63
CCDC112Q8NEF3 RNU6-935P-201ENST00000410371 100 ntBASIC-1.37□□□□□ -2.63
CCDC112Q8NEF3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.37□□□□□ -2.63
CCDC112Q8NEF3 AL353813.1-201ENST00000440700 253 ntBASIC-1.37□□□□□ -2.63
CCDC112Q8NEF3 RNA5SP470-201ENST00000516463 106 ntBASIC-1.37□□□□□ -2.63
CCDC112Q8NEF3 AC108081.1-201ENST00000604358 221 ntBASIC-1.37□□□□□ -2.63
CCDC112Q8NEF3 MTND4P29-201ENST00000503122 1372 ntBASIC-1.37□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.38□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.38□□□□□ -2.63
CCDC112Q8NEF3 SNORD64-201ENST00000386683 67 ntBASIC-1.38□□□□□ -2.63
CCDC112Q8NEF3 MT-TW-201ENST00000387382 68 ntBASIC-1.38□□□□□ -2.63
CCDC112Q8NEF3 SNORD42B-201ENST00000458893 67 ntBASIC-1.38□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.38□□□□□ -2.63
CCDC112Q8NEF3 RNU6-90P-201ENST00000606352 106 ntBASIC-1.38□□□□□ -2.63
CCDC112Q8NEF3 uc_338.19-201ENST00000616808 99 ntBASIC-1.38□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 RNU6-466P-201ENST00000391224 103 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 MIR548G-201ENST00000408442 89 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 RNU6-588P-201ENST00000410281 105 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 MTND5P20-201ENST00000448677 143 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 MIR378F-201ENST00000578143 78 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 MIR4499-201ENST00000584834 69 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 MIR6773-201ENST00000612812 74 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 MIR1255B1-201ENST00000636325 63 ntBASIC-1.39□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 SNORD115-23-201ENST00000364461 82 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 SNORD18B-201ENST00000365659 72 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 snoR1.1-201ENST00000628177 80 ntBASIC-1.4□□□□□ -2.63
CCDC112Q8NEF3 RNY1P11-201ENST00000363759 113 ntBASIC-1.41□□□□□ -2.64
CCDC112Q8NEF3 U3.27-201ENST00000391237 200 ntBASIC-1.41□□□□□ -2.64
CCDC112Q8NEF3 RNU6-337P-201ENST00000391243 106 ntBASIC-1.41□□□□□ -2.64
CCDC112Q8NEF3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.41□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.41□□□□□ -2.64
CCDC112Q8NEF3 MIR6844-201ENST00000637122 62 ntBASIC-1.41□□□□□ -2.64
CCDC112Q8NEF3 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 SNORD38.1-201ENST00000363863 68 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 MIR451A-201ENST00000385059 72 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 MIRLET7B-201ENST00000385140 83 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 MIR601-201ENST00000385256 79 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 RNU6-985P-201ENST00000410182 104 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 AC140658.3-201ENST00000567603 271 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 MIR3163-201ENST00000581592 73 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 AC134503.1-201ENST00000633048 54 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms