Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 RNU6-1065P-201ENST00000384513 106 ntBASIC2.3□□□□□ -2.04
LAPTM4BQ86VI4 MIR630-201ENST00000384957 97 ntBASIC2.3□□□□□ -2.04
LAPTM4BQ86VI4 RNU6-994P-201ENST00000410507 111 ntBASIC2.3□□□□□ -2.04
LAPTM4BQ86VI4 MIR4446-201ENST00000578505 67 ntBASIC2.3□□□□□ -2.04
LAPTM4BQ86VI4 MIR4804-201ENST00000581683 73 ntBASIC2.3□□□□□ -2.04
LAPTM4BQ86VI4 AC046143.2-201ENST00000609789 160 ntBASIC2.3□□□□□ -2.04
LAPTM4BQ86VI4 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
LAPTM4BQ86VI4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LAPTM4BQ86VI4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LAPTM4BQ86VI4 RNU4-88P-201ENST00000411220 86 ntBASIC2.29□□□□□ -2.04
LAPTM4BQ86VI4 HMGN2P23-201ENST00000456759 269 ntBASIC2.29□□□□□ -2.04
LAPTM4BQ86VI4 SNORD53-201ENST00000579969 78 ntBASIC2.29□□□□□ -2.04
LAPTM4BQ86VI4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LAPTM4BQ86VI4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LAPTM4BQ86VI4 AC025033.1-201ENST00000463883 194 ntBASIC2.28□□□□□ -2.04
LAPTM4BQ86VI4 MIR4287-201ENST00000579398 78 ntBASIC2.28□□□□□ -2.04
LAPTM4BQ86VI4 MIR4713-201ENST00000582691 75 ntBASIC2.28□□□□□ -2.04
LAPTM4BQ86VI4 uc_338.16-201ENST00000621804 95 ntBASIC2.28□□□□□ -2.04
LAPTM4BQ86VI4 FO624990.1-201ENST00000636373 85 ntBASIC2.28□□□□□ -2.04
LAPTM4BQ86VI4 RNU7-56P-201ENST00000458744 62 ntBASIC2.27□□□□□ -2.05
LAPTM4BQ86VI4 AC026436.1-201ENST00000510537 270 ntBASIC2.27□□□□□ -2.05
LAPTM4BQ86VI4 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
LAPTM4BQ86VI4 AC067863.3-201ENST00000624172 122 ntBASIC2.27□□□□□ -2.05
LAPTM4BQ86VI4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.27□□□□□ -2.05
LAPTM4BQ86VI4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
LAPTM4BQ86VI4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LAPTM4BQ86VI4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LAPTM4BQ86VI4 MIR302D-201ENST00000362275 68 ntBASIC2.26□□□□□ -2.05
LAPTM4BQ86VI4 RNA5SP393-201ENST00000363423 117 ntBASIC2.26□□□□□ -2.05
LAPTM4BQ86VI4 Y_RNA.174-201ENST00000363781 105 ntBASIC2.26□□□□□ -2.05
LAPTM4BQ86VI4 MIR100-201ENST00000385259 80 ntBASIC2.26□□□□□ -2.05
LAPTM4BQ86VI4 RNU1-123P-201ENST00000458950 160 ntBASIC2.26□□□□□ -2.05
LAPTM4BQ86VI4 SNORA40.17-201ENST00000517256 115 ntBASIC2.26□□□□□ -2.05
LAPTM4BQ86VI4 MIR6739-201ENST00000622461 75 ntBASIC2.26□□□□□ -2.05
LAPTM4BQ86VI4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.25□□□□□ -2.05
LAPTM4BQ86VI4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LAPTM4BQ86VI4 RNU4-53P-201ENST00000410828 140 ntBASIC2.25□□□□□ -2.05
LAPTM4BQ86VI4 AL049779.4-201ENST00000604500 156 ntBASIC2.25□□□□□ -2.05
LAPTM4BQ86VI4 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
LAPTM4BQ86VI4 SNORA3.2-201ENST00000408221 125 ntBASIC2.24□□□□□ -2.05
LAPTM4BQ86VI4 AL157398.1-201ENST00000452981 186 ntBASIC2.24□□□□□ -2.05
LAPTM4BQ86VI4 SNORA31.2-201ENST00000516019 134 ntBASIC2.24□□□□□ -2.05
LAPTM4BQ86VI4 AL512310.8-201ENST00000550183 120 ntBASIC2.24□□□□□ -2.05
LAPTM4BQ86VI4 MIR3945-201ENST00000581853 98 ntBASIC2.24□□□□□ -2.05
LAPTM4BQ86VI4 MIR5194-201ENST00000582634 120 ntBASIC2.24□□□□□ -2.05
LAPTM4BQ86VI4 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
LAPTM4BQ86VI4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LAPTM4BQ86VI4 SNORD33-201ENST00000362761 85 ntBASIC2.23□□□□□ -2.05
LAPTM4BQ86VI4 MIR520F-201ENST00000384824 87 ntBASIC2.23□□□□□ -2.05
LAPTM4BQ86VI4 MIR934-201ENST00000401241 83 ntBASIC2.23□□□□□ -2.05
LAPTM4BQ86VI4 SUMO1P4-201ENST00000429430 302 ntBASIC2.23□□□□□ -2.05
LAPTM4BQ86VI4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LAPTM4BQ86VI4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LAPTM4BQ86VI4 Y_RNA.363-201ENST00000365529 113 ntBASIC2.22□□□□□ -2.05
LAPTM4BQ86VI4 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
LAPTM4BQ86VI4 MIR548AD-201ENST00000584780 82 ntBASIC2.22□□□□□ -2.05
LAPTM4BQ86VI4 AL136317.1-201ENST00000612653 226 ntBASIC2.22□□□□□ -2.05
LAPTM4BQ86VI4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LAPTM4BQ86VI4 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
LAPTM4BQ86VI4 Y_RNA.379-201ENST00000365653 102 ntBASIC2.21□□□□□ -2.06
LAPTM4BQ86VI4 RNU6-1162P-201ENST00000384443 104 ntBASIC2.21□□□□□ -2.06
LAPTM4BQ86VI4 AL591704.2-201ENST00000421658 181 ntBASIC2.21□□□□□ -2.06
LAPTM4BQ86VI4 RNU6-902P-201ENST00000517212 91 ntBASIC2.21□□□□□ -2.06
LAPTM4BQ86VI4 AC104984.5-201ENST00000586878 94 ntBASIC2.21□□□□□ -2.06
LAPTM4BQ86VI4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LAPTM4BQ86VI4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
LAPTM4BQ86VI4 MIR1-1-201ENST00000362147 71 ntBASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 snoU13.13-201ENST00000458842 104 ntBASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 RN7SKP88-201ENST00000516847 250 ntBASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 AC018659.1-201ENST00000551083 169 ntBASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 AL359821.1-201ENST00000605519 182 ntBASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 7SK.8-201ENST00000612110 250 ntBASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 7SK.11-201ENST00000615477 250 ntBASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 7SK.13-201ENST00000622040 250 ntBASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LAPTM4BQ86VI4 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
LAPTM4BQ86VI4 SNORD113-2-201ENST00000391082 72 ntBASIC2.19□□□□□ -2.06
LAPTM4BQ86VI4 AC108210.2-201ENST00000503681 201 ntBASIC2.19□□□□□ -2.06
LAPTM4BQ86VI4 MIR4460-201ENST00000577862 86 ntBASIC2.19□□□□□ -2.06
LAPTM4BQ86VI4 MIR4299-201ENST00000577899 72 ntBASIC2.19□□□□□ -2.06
LAPTM4BQ86VI4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.18□□□□□ -2.06
LAPTM4BQ86VI4 RNU7-74P-201ENST00000459104 62 ntBASIC2.18□□□□□ -2.06
LAPTM4BQ86VI4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LAPTM4BQ86VI4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
LAPTM4BQ86VI4 RNU6-753P-201ENST00000363926 107 ntBASIC2.17□□□□□ -2.06
LAPTM4BQ86VI4 MIR30A-201ENST00000385092 71 ntBASIC2.17□□□□□ -2.06
LAPTM4BQ86VI4 MIR548L-201ENST00000408303 86 ntBASIC2.17□□□□□ -2.06
LAPTM4BQ86VI4 RNU7-21P-201ENST00000459430 62 ntBASIC2.17□□□□□ -2.06
LAPTM4BQ86VI4 SNORA70B-201ENST00000384210 135 ntBASIC2.16□□□□□ -2.06
LAPTM4BQ86VI4 MIR517B-201ENST00000385102 67 ntBASIC2.16□□□□□ -2.06
LAPTM4BQ86VI4 MIR644A-201ENST00000385262 94 ntBASIC2.16□□□□□ -2.06
LAPTM4BQ86VI4 MT-TY-201ENST00000387409 66 ntBASIC2.16□□□□□ -2.06
LAPTM4BQ86VI4 RNU1-40P-201ENST00000516816 164 ntBASIC2.16□□□□□ -2.06
LAPTM4BQ86VI4 RNU1-97P-201ENST00000516872 164 ntBASIC2.16□□□□□ -2.06
LAPTM4BQ86VI4 MIR5007-201ENST00000583098 95 ntBASIC2.16□□□□□ -2.06
LAPTM4BQ86VI4 MIR521-2-201ENST00000384818 87 ntBASIC2.15□□□□□ -2.07
LAPTM4BQ86VI4 MIR144-201ENST00000384886 86 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms