Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-448P-201ENST00000517052 107 ntBASIC0.55□□□□□ -2.32
NHLRC1Q6VVB1 RNU7-156P-201ENST00000517214 74 ntBASIC0.55□□□□□ -2.32
NHLRC1Q6VVB1 AC103810.7-201ENST00000607821 91 ntBASIC0.55□□□□□ -2.32
NHLRC1Q6VVB1 U7.3-201ENST00000616123 62 ntBASIC0.55□□□□□ -2.32
NHLRC1Q6VVB1 MALAT1.1-201ENST00000618249 95 ntBASIC0.55□□□□□ -2.32
NHLRC1Q6VVB1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 RNA5SP457-201ENST00000363657 124 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 RNU4-36P-201ENST00000364294 144 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 Y_RNA.544-201ENST00000384650 113 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 MIR516A2-201ENST00000384888 90 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 MIR181B2-201ENST00000385004 89 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 MIR516A1-201ENST00000385033 90 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 MIR520H-201ENST00000385126 88 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 MIR938-201ENST00000401216 83 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 SNORD100-201ENST00000408573 76 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 SPINT5P-201ENST00000448174 155 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 RNA5SP170-201ENST00000517150 101 ntBASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
NHLRC1Q6VVB1 SNORD36A-201ENST00000362874 73 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 SNORD45B-201ENST00000364617 72 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 MIR573-201ENST00000384964 99 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 RNY4P30-201ENST00000410216 95 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 SNORA40.13-201ENST00000516379 120 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 RNU6-765P-201ENST00000516916 99 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 AL513043.2-201ENST00000573941 143 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 RNU6-90P-201ENST00000606352 106 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 uc_338.16-201ENST00000621804 95 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 MIR4679-1-201ENST00000637619 75 ntBASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
NHLRC1Q6VVB1 RNU4-58P-201ENST00000363192 141 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-1255P-201ENST00000363434 112 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 SNORD58A-201ENST00000383875 65 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-571P-201ENST00000384128 107 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-1113P-201ENST00000384348 107 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-813P-201ENST00000384691 107 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 SNORD63B-201ENST00000411005 70 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 AC092628.1-201ENST00000436250 252 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 AL161932.1-201ENST00000437408 146 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 RNU7-195P-201ENST00000458793 62 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 RNU7-85P-201ENST00000458851 63 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 SNORA31.14-201ENST00000516728 116 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 MTND5P40-201ENST00000559945 246 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.10-201ENST00000362371 110 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 RNY1P8-201ENST00000383970 114 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-364P-201ENST00000384387 107 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-887P-201ENST00000410660 100 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 snoU13.11-201ENST00000459219 104 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 AC002350.1-201ENST00000490759 375 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-75P-201ENST00000515944 104 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.43-201ENST00000362670 111 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.57-201ENST00000362806 113 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 SNORD115-27-201ENST00000364430 82 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-497P-201ENST00000365316 104 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-535P-201ENST00000384722 107 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 MIR644A-201ENST00000385262 94 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 MIR140-201ENST00000385282 100 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.593-201ENST00000410292 98 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-267P-201ENST00000516714 103 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.705-201ENST00000516862 110 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-762P-201ENST00000517107 102 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-844P-201ENST00000517175 102 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 AC026421.1-201ENST00000519101 163 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 MIR4439-201ENST00000583746 80 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 AC096720.1-201ENST00000604441 183 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-957P-201ENST00000363652 99 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-219P-201ENST00000364728 107 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.369-201ENST00000365568 117 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.694-201ENST00000516677 117 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 AP003327.1-201ENST00000529684 127 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 AC243829.3-201ENST00000622177 108 ntBASIC0.49□□□□□ -2.33
NHLRC1Q6VVB1 Y_RNA.30-201ENST00000362572 97 ntBASIC0.48□□□□□ -2.33
NHLRC1Q6VVB1 MIR519A1-201ENST00000385257 85 ntBASIC0.48□□□□□ -2.33
NHLRC1Q6VVB1 AC244505.6-201ENST00000452829 130 ntBASIC0.48□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-1265P-201ENST00000516342 103 ntBASIC0.48□□□□□ -2.33
NHLRC1Q6VVB1 RNU7-161P-201ENST00000517289 62 ntBASIC0.48□□□□□ -2.33
NHLRC1Q6VVB1 MIR3612-201ENST00000579753 87 ntBASIC0.48□□□□□ -2.33
NHLRC1Q6VVB1 U6.100-201ENST00000636230 99 ntBASIC0.48□□□□□ -2.33
NHLRC1Q6VVB1 MIR101-2-201ENST00000362195 79 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-1260P-201ENST00000362944 107 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-132P-201ENST00000383863 107 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 SNORD38.2-201ENST00000384470 69 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms