| Q3C1V9 | MIR4498-201 | ENST00000577599 | 66 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Q3C1V9 | XIRP2-201 | ENST00000295237 | 5246 nt | TSL 2 BASIC | 2.24 | □□□□□ -2.05 | | |
| Q3C1V9 | MIR9-2-201 | ENST00000384838 | 87 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Q3C1V9 | MIR676-201 | ENST00000390702 | 67 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Q3C1V9 | SNORA44.1-201 | ENST00000517031 | 108 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Q3C1V9 | MIR4448-201 | ENST00000584360 | 86 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Q3C1V9 | AC008608.1-201 | ENST00000603910 | 127 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Q3C1V9 | AC068733.3-201 | ENST00000632757 | 269 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| Q3C1V9 | UBE3A-225 | ENST00000636667 | 5726 nt | TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| Q3C1V9 | SCN7A-201 | ENST00000409855 | 7183 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | Y_RNA.226-201 | ENST00000364337 | 114 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | SNORD115-22-201 | ENST00000364456 | 82 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | RNU6-604P-201 | ENST00000390917 | 100 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | RNU6-1177P-201 | ENST00000391058 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | SNORA31.2-201 | ENST00000516019 | 134 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | RNU6-287P-201 | ENST00000516230 | 98 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | MIR8053-201 | ENST00000613344 | 75 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | Evf-2_5p.1-201 | ENST00000614213 | 142 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | AC027335.2-201 | ENST00000624030 | 375 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Q3C1V9 | MIRLET7G-201 | ENST00000362280 | 84 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Q3C1V9 | MIR938-201 | ENST00000401216 | 83 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Q3C1V9 | SNORD111-201 | ENST00000408139 | 94 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU7-102P-201 | ENST00000458948 | 62 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Q3C1V9 | AC106800.4-201 | ENST00000614905 | 153 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Q3C1V9 | ZDBF2-202 | ENST00000611847 | 9890 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | Y_RNA.363-201 | ENST00000365529 | 113 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | Y_RNA.443-201 | ENST00000384135 | 111 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | MIR934-201 | ENST00000401241 | 83 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | RN7SKP88-201 | ENST00000516847 | 250 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | 7SK.8-201 | ENST00000612110 | 250 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | 7SK.11-201 | ENST00000615477 | 250 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | 7SK.13-201 | ENST00000622040 | 250 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | NPAT-201 | ENST00000278612 | 6117 nt | APPRIS P2 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| Q3C1V9 | Y_RNA.258-201 | ENST00000364613 | 105 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU6-382P-201 | ENST00000365181 | 106 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | RNA5SP37-201 | ENST00000365420 | 130 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | RNA5SP489-201 | ENST00000410986 | 109 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | AL135923.1-201 | ENST00000413066 | 196 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | SNORD13-201 | ENST00000459299 | 104 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU1-40P-201 | ENST00000516816 | 164 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU1-97P-201 | ENST00000516872 | 164 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | PTPRQ-209 | ENST00000616559 | 8165 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | KTN1-205 | ENST00000395314 | 4618 nt | APPRIS P4 TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| Q3C1V9 | SNORA25.4-201 | ENST00000363666 | 124 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Q3C1V9 | RNA5SP190-201 | ENST00000365222 | 118 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Q3C1V9 | MIR9-3-201 | ENST00000385084 | 90 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Q3C1V9 | AC244505.6-201 | ENST00000452829 | 130 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU6-274P-201 | ENST00000459566 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU6-1053P-201 | ENST00000515930 | 101 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Q3C1V9 | MIR8081-201 | ENST00000611533 | 95 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Q3C1V9 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| Q3C1V9 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| Q3C1V9 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| Q3C1V9 | SNORD113.1-201 | ENST00000363280 | 73 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| Q3C1V9 | RNA5SP160-201 | ENST00000364866 | 120 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU6-994P-201 | ENST00000410507 | 111 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| Q3C1V9 | SCN7A-206 | ENST00000619410 | 7186 nt | APPRIS P1 TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| Q3C1V9 | SCN7A-207 | ENST00000621965 | 7186 nt | APPRIS P1 TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| Q3C1V9 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| Q3C1V9 | RNU6-1216P-201 | ENST00000362590 | 107 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| Q3C1V9 | RNA5SP338-201 | ENST00000410495 | 85 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| Q3C1V9 | IGLVVI-22-1-201 | ENST00000521183 | 211 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| Q3C1V9 | MIR3198-2-201 | ENST00000577868 | 80 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| Q3C1V9 | MIR4781-201 | ENST00000585250 | 76 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| Q3C1V9 | AL078603.1-201 | ENST00000603824 | 313 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| Q3C1V9 | AL157834.3-201 | ENST00000615543 | 103 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| Q3C1V9 | SKIL-204 | ENST00000458537 | 7182 nt | APPRIS P1 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| Q3C1V9 | HFM1-201 | ENST00000370425 | 4931 nt | APPRIS P1 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.06 | | |
| Q3C1V9 | U3.27-201 | ENST00000391237 | 200 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | MIR1287-201 | ENST00000408492 | 90 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | AL591704.2-201 | ENST00000421658 | 181 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | AC244098.3-201 | ENST00000424803 | 96 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | RNU6-977P-201 | ENST00000516411 | 103 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | RNU7-13P-201 | ENST00000516413 | 62 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | SNORA25.15-201 | ENST00000516487 | 89 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | MIR4804-201 | ENST00000581683 | 73 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | AC084768.2-201 | ENST00000622736 | 221 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Q3C1V9 | RNU6-369P-201 | ENST00000362515 | 102 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Q3C1V9 | SNORD116-24-201 | ENST00000384549 | 92 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Q3C1V9 | MTND4LP19-201 | ENST00000403051 | 166 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Q3C1V9 | C16orf97-206 | ENST00000622950 | 415 nt | TSL 2 BASIC | 2.14 | □□□□□ -2.07 | | |
| Q3C1V9 | TDRD15-202 | ENST00000622654 | 5805 nt | APPRIS P1 BASIC | 2.13 | □□□□□ -2.07 | | |
| Q3C1V9 | CEP162-201 | ENST00000257766 | 5063 nt | TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| Q3C1V9 | SNORD115-44-201 | ENST00000365391 | 82 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Q3C1V9 | RNU7-21P-201 | ENST00000459430 | 62 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Q3C1V9 | PI15-201 | ENST00000260113 | 6732 nt | APPRIS P1 TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| Q3C1V9 | Y_RNA.32-201 | ENST00000362589 | 110 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Q3C1V9 | MIR100-201 | ENST00000385259 | 80 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Q3C1V9 | RNU1-119P-201 | ENST00000391122 | 165 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Q3C1V9 | RNU4-62P-201 | ENST00000410125 | 130 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Q3C1V9 | AC008834.1-201 | ENST00000511612 | 175 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Q3C1V9 | RNU6-752P-201 | ENST00000516376 | 102 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Q3C1V9 | SNORA31.14-201 | ENST00000516728 | 116 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Q3C1V9 | snoU13.31-201 | ENST00000607291 | 104 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Q3C1V9 | MIR378A-201 | ENST00000362177 | 66 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Q3C1V9 | SNORD115-24-201 | ENST00000363528 | 82 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Q3C1V9 | RNU6-910P-201 | ENST00000390844 | 107 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Q3C1V9 | AL691482.2-201 | ENST00000457453 | 84 nt | BASIC | 2.11 | □□□□□ -2.07 | | |