Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.16□□□□□ -2.6
NKX2-5P52952 MIR5591-201ENST00000578248 65 ntBASIC-1.16□□□□□ -2.6
NKX2-5P52952 MIR4744-201ENST00000581563 82 ntBASIC-1.16□□□□□ -2.6
NKX2-5P52952 AC108081.1-201ENST00000604358 221 ntBASIC-1.16□□□□□ -2.6
NKX2-5P52952 RNU6-90P-201ENST00000606352 106 ntBASIC-1.16□□□□□ -2.6
NKX2-5P52952 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.16□□□□□ -2.6
NKX2-5P52952 RNA5SP26-201ENST00000362406 119 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 RNU6-643P-201ENST00000384018 107 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 MIR507-201ENST00000385234 94 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 RNU6-578P-201ENST00000390980 103 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 MIR1302-11-201ENST00000408051 138 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 MIR1302-9-201ENST00000408365 138 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 MIR1302-10-201ENST00000408734 138 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 MIR548H3-201ENST00000408771 118 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 SNORD2.1-201ENST00000458762 69 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 RNU6-75P-201ENST00000515944 104 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 RNU6-412P-201ENST00000516434 106 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 MIR1302-2-201ENST00000607096 138 ntBASIC-1.17□□□□□ -2.6
NKX2-5P52952 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 SNORA26.4-201ENST00000391188 123 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 MIR1255B2-201ENST00000408618 67 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.18□□□□□ -2.6
NKX2-5P52952 FGF7P4-201ENST00000509595 295 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 SNORA40.15-201ENST00000516884 107 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 AC021753.1-201ENST00000635724 168 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 AL512310.12-203ENST00000640543 90 ntBASIC-1.18□□□□□ -2.6
NKX2-5P52952 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 SNORA2.1-201ENST00000363089 137 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 RNY1P11-201ENST00000363759 113 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 RNU6-309P-201ENST00000364573 106 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 SNORA33.1-201ENST00000364957 130 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 RNU6-768P-201ENST00000384683 107 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 RPL35AP4-201ENST00000412007 102 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.19□□□□□ -2.6
NKX2-5P52952 RNU6-277P-201ENST00000516272 106 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 MIR4770-201ENST00000579149 58 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.19□□□□□ -2.6
NKX2-5P52952 RNU6-495P-201ENST00000362995 107 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 RNU6-103P-201ENST00000363686 107 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 MIR203A-201ENST00000384836 110 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 MIR29B1-201ENST00000385015 81 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 RNU6-823P-201ENST00000391042 103 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 AP002795.1-201ENST00000534879 84 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.2□□□□□ -2.6
NKX2-5P52952 MIR1302-1-201ENST00000637932 143 ntBASIC-1.2□□□□□ -2.6
NKX2-5P52952 RNU6-924P-201ENST00000362926 108 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 SNORD115-33-201ENST00000363723 82 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 MIR759-201ENST00000390224 91 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 U3.27-201ENST00000391237 200 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 RNU6-876P-201ENST00000391295 104 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 RNU6-493P-201ENST00000391321 108 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
NKX2-5P52952 AL137067.1-201ENST00000615933 120 ntBASIC-1.21□□□□□ -2.6
NKX2-5P52952 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.21□□□□□ -2.6
NKX2-5P52952 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 RNU6-818P-201ENST00000364837 108 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 RNU6-132P-201ENST00000383863 107 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
NKX2-5P52952 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 AL589823.1-201ENST00000429577 183 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 RNU7-152P-201ENST00000458982 64 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.22□□□□□ -2.6
NKX2-5P52952 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 338.2 ms