Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.84□□□□□ -2.54
SLC6A1P30531 RNU6-901P-201ENST00000384593 106 ntBASIC-0.84□□□□□ -2.54
SLC6A1P30531 MT-TI-201ENST00000387365 69 ntBASIC-0.84□□□□□ -2.54
SLC6A1P30531 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.84□□□□□ -2.54
SLC6A1P30531 AP001328.1-201ENST00000528550 176 ntBASIC-0.84□□□□□ -2.54
SLC6A1P30531 AC145423.2-201ENST00000610631 239 ntBASIC-0.84□□□□□ -2.54
SLC6A1P30531 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.85□□□□□ -2.55
SLC6A1P30531 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.85□□□□□ -2.55
SLC6A1P30531 snoU13.13-201ENST00000458842 104 ntBASIC-0.85□□□□□ -2.55
SLC6A1P30531 RNU6-138P-201ENST00000515952 107 ntBASIC-0.85□□□□□ -2.55
SLC6A1P30531 MIR4280-201ENST00000582178 76 ntBASIC-0.85□□□□□ -2.55
SLC6A1P30531 MIR3658-201ENST00000636291 56 ntBASIC-0.85□□□□□ -2.55
SLC6A1P30531 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 RNU6-957P-201ENST00000363652 99 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 RNU6-312P-201ENST00000364629 107 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 MIR548AX-201ENST00000580117 73 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 AC044792.1-201ENST00000593294 196 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 MIR1255B1-201ENST00000636325 63 ntBASIC-0.86□□□□□ -2.55
SLC6A1P30531 SNORD115-25-201ENST00000362619 82 ntBASIC-0.87□□□□□ -2.55
SLC6A1P30531 MIR204-201ENST00000385200 110 ntBASIC-0.87□□□□□ -2.55
SLC6A1P30531 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.87□□□□□ -2.55
SLC6A1P30531 MIR6851-201ENST00000617060 67 ntBASIC-0.87□□□□□ -2.55
SLC6A1P30531 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.88□□□□□ -2.55
SLC6A1P30531 RNU7-55P-201ENST00000459426 62 ntBASIC-0.88□□□□□ -2.55
SLC6A1P30531 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.88□□□□□ -2.55
SLC6A1P30531 SNORD38.3-201ENST00000516599 73 ntBASIC-0.88□□□□□ -2.55
SLC6A1P30531 IGKV1-22-201ENST00000524313 326 ntBASIC-0.88□□□□□ -2.55
SLC6A1P30531 MIR3163-201ENST00000581592 73 ntBASIC-0.88□□□□□ -2.55
SLC6A1P30531 RNU6-86P-201ENST00000606534 107 ntBASIC-0.88□□□□□ -2.55
SLC6A1P30531 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.89□□□□□ -2.55
SLC6A1P30531 SNORD37.2-201ENST00000391075 66 ntBASIC-0.89□□□□□ -2.55
SLC6A1P30531 SPINT5P-201ENST00000448174 155 ntBASIC-0.89□□□□□ -2.55
SLC6A1P30531 AC021146.6-201ENST00000514659 117 ntBASIC-0.89□□□□□ -2.55
SLC6A1P30531 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.89□□□□□ -2.55
SLC6A1P30531 AL117187.1-201ENST00000555482 181 ntBASIC-0.89□□□□□ -2.55
SLC6A1P30531 MIR548O2-201ENST00000616090 70 ntBASIC-0.89□□□□□ -2.55
SLC6A1P30531 AC021753.1-201ENST00000635724 168 ntBASIC-0.89□□□□□ -2.55
SLC6A1P30531 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.9□□□□□ -2.55
SLC6A1P30531 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.9□□□□□ -2.55
SLC6A1P30531 SNORD101-201ENST00000384027 73 ntBASIC-0.9□□□□□ -2.55
SLC6A1P30531 RNU6-239P-201ENST00000390990 99 ntBASIC-0.9□□□□□ -2.55
SLC6A1P30531 RNU4-71P-201ENST00000516258 113 ntBASIC-0.9□□□□□ -2.55
SLC6A1P30531 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.9□□□□□ -2.55
SLC6A1P30531 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 MIR548G-201ENST00000408442 89 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 SNORA7.5-201ENST00000410672 110 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 RNU7-121P-201ENST00000516604 62 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 SNORA40.17-201ENST00000517256 115 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 MIR4696-201ENST00000581431 70 ntBASIC-0.91□□□□□ -2.56
SLC6A1P30531 RNU6-664P-201ENST00000362381 107 ntBASIC-0.92□□□□□ -2.56
SLC6A1P30531 RNU6-867P-201ENST00000364956 107 ntBASIC-0.92□□□□□ -2.56
SLC6A1P30531 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.92□□□□□ -2.56
SLC6A1P30531 MIR216B-201ENST00000390186 82 ntBASIC-0.92□□□□□ -2.56
SLC6A1P30531 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.92□□□□□ -2.56
SLC6A1P30531 RNU6-235P-201ENST00000362644 107 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 MIR582-201ENST00000365731 98 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 RNU6-466P-201ENST00000391224 103 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 AL353813.1-201ENST00000440700 253 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 RNU6-90P-201ENST00000606352 106 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 AL512310.12-203ENST00000640543 90 ntBASIC-0.93□□□□□ -2.56
SLC6A1P30531 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 SNORD38.1-201ENST00000363863 68 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 MIR196A1-201ENST00000388006 70 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 MIR548E-201ENST00000408287 88 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 RNU6-935P-201ENST00000410371 100 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 SNORD57-201ENST00000448188 72 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 AC097510.1-201ENST00000510945 133 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 AC022559.1-201ENST00000520905 205 ntBASIC-0.94□□□□□ -2.56
SLC6A1P30531 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 RNU6-973P-201ENST00000364690 107 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 RNU6-54P-201ENST00000365563 107 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 SNORA13-201ENST00000458790 133 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.95□□□□□ -2.56
SLC6A1P30531 AL117351.2-201ENST00000513571 157 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 RNU6-762P-201ENST00000517107 102 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.95□□□□□ -2.56
SLC6A1P30531 AP002392.1-201ENST00000537692 208 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 MIR3128-201ENST00000581957 66 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 AL627230.5-201ENST00000619807 58 ntBASIC-0.95□□□□□ -2.56
SLC6A1P30531 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.96□□□□□ -2.56
SLC6A1P30531 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.96□□□□□ -2.56
SLC6A1P30531 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms