Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.41□□□□□ -2.64
HLA-DMBP28068 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.41□□□□□ -2.64
HLA-DMBP28068 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.41□□□□□ -2.64
HLA-DMBP28068 RNU6-706P-201ENST00000517229 104 ntBASIC-1.41□□□□□ -2.64
HLA-DMBP28068 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.41□□□□□ -2.64
HLA-DMBP28068 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.41□□□□□ -2.64
HLA-DMBP28068 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.41□□□□□ -2.64
HLA-DMBP28068 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.42□□□□□ -2.64
HLA-DMBP28068 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.42□□□□□ -2.64
HLA-DMBP28068 SNORD115-23-201ENST00000364461 82 ntBASIC-1.42□□□□□ -2.64
HLA-DMBP28068 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.42□□□□□ -2.64
HLA-DMBP28068 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.42□□□□□ -2.64
HLA-DMBP28068 RNA5SP461-201ENST00000516451 104 ntBASIC-1.42□□□□□ -2.64
HLA-DMBP28068 snoR1.1-201ENST00000628177 80 ntBASIC-1.42□□□□□ -2.64
HLA-DMBP28068 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.43□□□□□ -2.64
HLA-DMBP28068 RNU6-54P-201ENST00000365563 107 ntBASIC-1.43□□□□□ -2.64
HLA-DMBP28068 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.43□□□□□ -2.64
HLA-DMBP28068 RNU6-935P-201ENST00000410371 100 ntBASIC-1.43□□□□□ -2.64
HLA-DMBP28068 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.43□□□□□ -2.64
HLA-DMBP28068 RNU6-521P-201ENST00000516663 105 ntBASIC-1.43□□□□□ -2.64
HLA-DMBP28068 MIR6773-201ENST00000612812 74 ntBASIC-1.43□□□□□ -2.64
HLA-DMBP28068 U4.2-201ENST00000618561 85 ntBASIC-1.43□□□□□ -2.64
HLA-DMBP28068 SNORD115-19-201ENST00000363098 82 ntBASIC-1.44□□□□□ -2.64
HLA-DMBP28068 SNORD115-18-201ENST00000363293 82 ntBASIC-1.44□□□□□ -2.64
HLA-DMBP28068 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.44□□□□□ -2.64
HLA-DMBP28068 SNORD115-17-201ENST00000364612 82 ntBASIC-1.44□□□□□ -2.64
HLA-DMBP28068 RNU6-762P-201ENST00000517107 102 ntBASIC-1.44□□□□□ -2.64
HLA-DMBP28068 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 RNU6-818P-201ENST00000364837 108 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 SNORD18.2-201ENST00000459604 70 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 RNA5SP180-201ENST00000516181 101 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 RNY4P20-201ENST00000516678 93 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.45□□□□□ -2.64
HLA-DMBP28068 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 RNY3P1-201ENST00000365085 102 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 MIRLET7B-201ENST00000385140 83 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 RNU6-466P-201ENST00000391224 103 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 U3.27-201ENST00000391237 200 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.46□□□□□ -2.64
HLA-DMBP28068 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 AC113195.1-201ENST00000579952 141 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 AC132825.6-201ENST00000638861 357 ntBASIC-1.46□□□□□ -2.64
HLA-DMBP28068 MIR335-201ENST00000362173 94 ntBASIC-1.47□□□□□ -2.64
HLA-DMBP28068 MIR365A-201ENST00000362260 87 ntBASIC-1.47□□□□□ -2.64
HLA-DMBP28068 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.47□□□□□ -2.64
HLA-DMBP28068 SNORD42.2-201ENST00000365570 69 ntBASIC-1.47□□□□□ -2.64
HLA-DMBP28068 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.47□□□□□ -2.64
HLA-DMBP28068 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.47□□□□□ -2.64
HLA-DMBP28068 MIR3149-201ENST00000584629 83 ntBASIC-1.47□□□□□ -2.64
HLA-DMBP28068 U6atac.1-201ENST00000616025 117 ntBASIC-1.47□□□□□ -2.64
HLA-DMBP28068 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 SNORD114-17-201ENST00000364699 75 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 RNU6-275P-201ENST00000364910 107 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 RNU6-768P-201ENST00000384683 107 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 MIR1285-2-201ENST00000408311 88 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 RNU6-588P-201ENST00000410281 105 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 SNORD42B-201ENST00000458893 67 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.48□□□□□ -2.65
HLA-DMBP28068 RNU6-337P-201ENST00000391243 106 ntBASIC-1.49□□□□□ -2.65
HLA-DMBP28068 AC138207.3-201ENST00000585289 166 ntBASIC-1.49□□□□□ -2.65
HLA-DMBP28068 AC139792.2-201ENST00000624218 587 ntBASIC-1.49□□□□□ -2.65
HLA-DMBP28068 MIR369-201ENST00000362155 70 ntBASIC-1.5□□□□□ -2.65
HLA-DMBP28068 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.5□□□□□ -2.65
HLA-DMBP28068 SNORA62.4-201ENST00000365504 151 ntBASIC-1.5□□□□□ -2.65
HLA-DMBP28068 MIR451A-201ENST00000385059 72 ntBASIC-1.5□□□□□ -2.65
HLA-DMBP28068 RNU7-6P-201ENST00000516845 62 ntBASIC-1.5□□□□□ -2.65
HLA-DMBP28068 AP002392.1-201ENST00000537692 208 ntBASIC-1.5□□□□□ -2.65
HLA-DMBP28068 MIR4441-201ENST00000582623 100 ntBASIC-1.5□□□□□ -2.65
HLA-DMBP28068 RNU6-90P-201ENST00000606352 106 ntBASIC-1.5□□□□□ -2.65
HLA-DMBP28068 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.51□□□□□ -2.65
HLA-DMBP28068 SNORD114-3-201ENST00000364969 75 ntBASIC-1.51□□□□□ -2.65
HLA-DMBP28068 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.51□□□□□ -2.65
HLA-DMBP28068 MIR548G-201ENST00000408442 89 ntBASIC-1.51□□□□□ -2.65
HLA-DMBP28068 RNU6-479P-201ENST00000516348 105 ntBASIC-1.51□□□□□ -2.65
HLA-DMBP28068 AL137067.1-201ENST00000615933 120 ntBASIC-1.51□□□□□ -2.65
HLA-DMBP28068 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 SNORD38.1-201ENST00000363863 68 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 SNORA63.6-201ENST00000364921 119 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 SNORA75.5-201ENST00000391291 81 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 HLA-S-202ENST00000425174 53 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 RNY3P16-201ENST00000516338 101 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 MIR4643-201ENST00000577473 78 ntBASIC-1.52□□□□□ -2.65
HLA-DMBP28068 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.53□□□□□ -2.65
HLA-DMBP28068 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.53□□□□□ -2.65
HLA-DMBP28068 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.53□□□□□ -2.65
HLA-DMBP28068 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.53□□□□□ -2.65
HLA-DMBP28068 MTND1P19-201ENST00000511780 315 ntBASIC-1.53□□□□□ -2.65
HLA-DMBP28068 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.54□□□□□ -2.66
HLA-DMBP28068 RNU6-508P-201ENST00000363231 103 ntBASIC-1.54□□□□□ -2.66
HLA-DMBP28068 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms