Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNY1P8-201ENST00000383970 114 ntBASIC1.11□□□□□ -2.23
ERCC3P19447 MIR598-201ENST00000384868 97 ntBASIC1.11□□□□□ -2.23
ERCC3P19447 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
ERCC3P19447 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.11□□□□□ -2.23
ERCC3P19447 RNU6-162P-201ENST00000516228 103 ntBASIC1.11□□□□□ -2.23
ERCC3P19447 Y_RNA.677-201ENST00000516401 85 ntBASIC1.11□□□□□ -2.23
ERCC3P19447 RNU6-135P-201ENST00000516769 101 ntBASIC1.11□□□□□ -2.23
ERCC3P19447 AC025521.1-201ENST00000621624 286 ntBASIC1.11□□□□□ -2.23
ERCC3P19447 RNU6-524P-201ENST00000384270 107 ntBASIC1.1□□□□□ -2.23
ERCC3P19447 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.1□□□□□ -2.23
ERCC3P19447 RPL39P28-201ENST00000465655 155 ntBASIC1.1□□□□□ -2.23
ERCC3P19447 RNU6-168P-201ENST00000516189 101 ntBASIC1.1□□□□□ -2.23
ERCC3P19447 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
ERCC3P19447 AP001318.4-201ENST00000616637 121 ntBASIC1.1□□□□□ -2.23
ERCC3P19447 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.1□□□□□ -2.23
ERCC3P19447 RNU6-972P-201ENST00000391208 107 ntBASIC1.09□□□□□ -2.23
ERCC3P19447 MIR548L-201ENST00000408303 86 ntBASIC1.09□□□□□ -2.23
ERCC3P19447 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
ERCC3P19447 MIR2052-201ENST00000636055 55 ntBASIC1.09□□□□□ -2.23
ERCC3P19447 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.09□□□□□ -2.23
ERCC3P19447 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.08□□□□□ -2.24
ERCC3P19447 RNU6-887P-201ENST00000410660 100 ntBASIC1.08□□□□□ -2.24
ERCC3P19447 AC244505.6-201ENST00000452829 130 ntBASIC1.08□□□□□ -2.24
ERCC3P19447 CYP3A137P-201ENST00000562436 69 ntBASIC1.08□□□□□ -2.24
ERCC3P19447 RNU6-110P-201ENST00000384508 104 ntBASIC1.07□□□□□ -2.24
ERCC3P19447 RNA5SP89-201ENST00000410300 108 ntBASIC1.07□□□□□ -2.24
ERCC3P19447 MTATP8P2-201ENST00000435212 202 ntBASIC1.07□□□□□ -2.24
ERCC3P19447 RNU7-104P-201ENST00000459398 79 ntBASIC1.07□□□□□ -2.24
ERCC3P19447 AL513043.2-201ENST00000573941 143 ntBASIC1.07□□□□□ -2.24
ERCC3P19447 AC244669.1-204ENST00000621564 178 ntBASIC1.07□□□□□ -2.24
ERCC3P19447 SNORD36A-201ENST00000362874 73 ntBASIC1.06□□□□□ -2.24
ERCC3P19447 SNORD18A-201ENST00000363753 72 ntBASIC1.06□□□□□ -2.24
ERCC3P19447 MIR140-201ENST00000385282 100 ntBASIC1.06□□□□□ -2.24
ERCC3P19447 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
ERCC3P19447 Y_RNA.36-201ENST00000362602 112 ntBASIC1.05□□□□□ -2.24
ERCC3P19447 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
ERCC3P19447 MIR4639-201ENST00000584938 69 ntBASIC1.05□□□□□ -2.24
ERCC3P19447 U7.3-201ENST00000616123 62 ntBASIC1.05□□□□□ -2.24
ERCC3P19447 RNU6-1260P-201ENST00000362944 107 ntBASIC1.04□□□□□ -2.24
ERCC3P19447 SNORD28-201ENST00000384706 75 ntBASIC1.04□□□□□ -2.24
ERCC3P19447 RNU6-466P-201ENST00000391224 103 ntBASIC1.04□□□□□ -2.24
ERCC3P19447 RNA5SP94-201ENST00000516917 108 ntBASIC1.04□□□□□ -2.24
ERCC3P19447 MIR519A1-201ENST00000385257 85 ntBASIC1.03□□□□□ -2.24
ERCC3P19447 AL161932.1-201ENST00000437408 146 ntBASIC1.03□□□□□ -2.24
ERCC3P19447 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ERCC3P19447 AC092634.7-201ENST00000621022 103 ntBASIC1.02□□□□□ -2.25
ERCC3P19447 Y_RNA.348-201ENST00000365403 103 ntBASIC1.01□□□□□ -2.25
ERCC3P19447 RNU6-716P-201ENST00000365621 103 ntBASIC1.01□□□□□ -2.25
ERCC3P19447 AL606490.4-201ENST00000423117 127 ntBASIC1.01□□□□□ -2.25
ERCC3P19447 snoU13.11-201ENST00000459219 104 ntBASIC1.01□□□□□ -2.25
ERCC3P19447 RNA5SP227-201ENST00000516184 113 ntBASIC1.01□□□□□ -2.25
ERCC3P19447 MIR4653-201ENST00000585107 83 ntBASIC1.01□□□□□ -2.25
ERCC3P19447 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.01□□□□□ -2.25
ERCC3P19447 SNORD58A-201ENST00000383875 65 ntBASIC1□□□□□ -2.25
ERCC3P19447 MIR6779-201ENST00000617283 64 ntBASIC1□□□□□ -2.25
ERCC3P19447 AC067863.3-201ENST00000624172 122 ntBASIC1□□□□□ -2.25
ERCC3P19447 RNU6-957P-201ENST00000363652 99 ntBASIC0.99□□□□□ -2.25
ERCC3P19447 RNU7-161P-201ENST00000517289 62 ntBASIC0.99□□□□□ -2.25
ERCC3P19447 TRDV1-202ENST00000621643 102 ntBASIC0.99□□□□□ -2.25
ERCC3P19447 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
ERCC3P19447 SNORD116-10-201ENST00000363791 102 ntBASIC0.98□□□□□ -2.25
ERCC3P19447 RNY4P30-201ENST00000410216 95 ntBASIC0.98□□□□□ -2.25
ERCC3P19447 RNU6-65P-201ENST00000516332 98 ntBASIC0.98□□□□□ -2.25
ERCC3P19447 RNU7-13P-201ENST00000516413 62 ntBASIC0.98□□□□□ -2.25
ERCC3P19447 RNU6-158P-201ENST00000517104 100 ntBASIC0.98□□□□□ -2.25
ERCC3P19447 RNA5SP47-201ENST00000517230 109 ntBASIC0.98□□□□□ -2.25
ERCC3P19447 AL590095.2-201ENST00000604136 117 ntBASIC0.98□□□□□ -2.25
ERCC3P19447 RNU6-519P-201ENST00000410590 108 ntBASIC0.97□□□□□ -2.25
ERCC3P19447 SCARNA16.5-201ENST00000517114 183 ntBASIC0.97□□□□□ -2.25
ERCC3P19447 MIR4714-201ENST00000580728 77 ntBASIC0.97□□□□□ -2.25
ERCC3P19447 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.96□□□□□ -2.26
ERCC3P19447 MTATP6P29-201ENST00000415057 132 ntBASIC0.96□□□□□ -2.26
ERCC3P19447 Y_RNA.648-201ENST00000459455 110 ntBASIC0.96□□□□□ -2.26
ERCC3P19447 RNA5SP268-201ENST00000516828 124 ntBASIC0.96□□□□□ -2.26
ERCC3P19447 MIR4536-1-201ENST00000583537 88 ntBASIC0.96□□□□□ -2.26
ERCC3P19447 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
ERCC3P19447 RNU6-905P-201ENST00000384434 107 ntBASIC0.95□□□□□ -2.26
ERCC3P19447 MIR146A-201ENST00000385201 99 ntBASIC0.95□□□□□ -2.26
ERCC3P19447 SNORD71-201ENST00000411292 86 ntBASIC0.95□□□□□ -2.26
ERCC3P19447 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.95□□□□□ -2.26
ERCC3P19447 Y_RNA.190-201ENST00000363964 101 ntBASIC0.94□□□□□ -2.26
ERCC3P19447 RNA5SP517-201ENST00000364724 117 ntBASIC0.94□□□□□ -2.26
ERCC3P19447 Y_RNA.283-201ENST00000364798 112 ntBASIC0.94□□□□□ -2.26
ERCC3P19447 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.94□□□□□ -2.26
ERCC3P19447 SNORA25.18-201ENST00000607153 114 ntBASIC0.94□□□□□ -2.26
ERCC3P19447 MALAT1.1-201ENST00000618249 95 ntBASIC0.94□□□□□ -2.26
ERCC3P19447 SNORA36.1-201ENST00000363424 132 ntBASIC0.93□□□□□ -2.26
ERCC3P19447 RNA5SP403-201ENST00000363598 108 ntBASIC0.93□□□□□ -2.26
ERCC3P19447 RNU6-640P-201ENST00000363693 105 ntBASIC0.93□□□□□ -2.26
ERCC3P19447 Y_RNA.290-201ENST00000364879 114 ntBASIC0.93□□□□□ -2.26
ERCC3P19447 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
ERCC3P19447 Y_RNA.220-201ENST00000364244 109 ntBASIC0.92□□□□□ -2.26
ERCC3P19447 Y_RNA.609-201ENST00000410669 89 ntBASIC0.92□□□□□ -2.26
ERCC3P19447 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
ERCC3P19447 RNU6-945P-201ENST00000383947 107 ntBASIC0.91□□□□□ -2.26
ERCC3P19447 SNORA8.2-201ENST00000384372 139 ntBASIC0.91□□□□□ -2.26
ERCC3P19447 RN7SL793P-201ENST00000583259 296 ntBASIC0.91□□□□□ -2.26
ERCC3P19447 RNA5SP325-201ENST00000363756 130 ntBASIC0.9□□□□□ -2.27
ERCC3P19447 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
ERCC3P19447 U6.100-201ENST00000636230 99 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms