Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
COL11A1P12107 Y_RNA.215-201ENST00000364204 112 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-865P-201ENST00000364772 107 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-571P-201ENST00000384128 107 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-291P-201ENST00000384720 107 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU7-159P-201ENST00000459284 62 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-1212P-201ENST00000517023 104 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 AL162726.3-218ENST00000636401 95 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-1229P-201ENST00000364295 107 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-302P-201ENST00000365249 107 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6V-201ENST00000384105 107 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 Y_RNA.495-201ENST00000384435 112 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 MIR516B1-201ENST00000385211 90 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-269P-201ENST00000391077 97 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-243P-201ENST00000391140 107 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 RNU6-1254P-201ENST00000391266 104 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 SNORD110-201ENST00000408189 75 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 MIR1263-201ENST00000408324 86 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 MTND4LP9-201ENST00000427694 174 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 AP001328.1-201ENST00000528550 176 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 AC090425.1-201ENST00000610007 140 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 AC025166.1-201ENST00000612411 163 ntBASIC0.01□□□□□ -2.41
COL11A1P12107 SNORD115-24-201ENST00000363528 82 ntBASIC0□□□□□ -2.41
COL11A1P12107 Y_RNA.155-201ENST00000363632 101 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNY1P11-201ENST00000363759 113 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNA5SP128-201ENST00000365305 116 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNU6-652P-201ENST00000365488 107 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNU6-409P-201ENST00000384114 104 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNU6-616P-201ENST00000384353 107 ntBASIC0□□□□□ -2.41
COL11A1P12107 Y_RNA.506-201ENST00000384494 102 ntBASIC0□□□□□ -2.41
COL11A1P12107 Y_RNA.568-201ENST00000384742 113 ntBASIC0□□□□□ -2.41
COL11A1P12107 MIR145-201ENST00000384967 88 ntBASIC0□□□□□ -2.41
COL11A1P12107 MIR599-201ENST00000385069 95 ntBASIC0□□□□□ -2.41
COL11A1P12107 MT-TQ-201ENST00000387372 72 ntBASIC0□□□□□ -2.41
COL11A1P12107 MIR501-201ENST00000390204 84 ntBASIC0□□□□□ -2.41
COL11A1P12107 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0□□□□□ -2.41
COL11A1P12107 RNU7-195P-201ENST00000458793 62 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNU7-74P-201ENST00000459104 62 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNU5E-3P-201ENST00000515913 68 ntBASIC0□□□□□ -2.41
COL11A1P12107 RN7SKP12-201ENST00000516275 143 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNU6-1232P-201ENST00000516299 86 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0□□□□□ -2.41
COL11A1P12107 RNU7-6P-201ENST00000516845 62 ntBASIC0□□□□□ -2.41
COL11A1P12107 MIR3925-201ENST00000584674 77 ntBASIC0□□□□□ -2.41
COL11A1P12107 MIR499B-201ENST00000636498 73 ntBASIC0□□□□□ -2.41
COL11A1P12107 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 SNORD49B-201ENST00000365172 72 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 SNORD114-12-201ENST00000365400 75 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU6-187P-201ENST00000384139 106 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU7-106P-201ENST00000459514 67 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU7-200P-201ENST00000516105 62 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU6-850P-201ENST00000516934 103 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 MIR4677-201ENST00000584153 80 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 AL670379.3-201ENST00000605040 251 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 AC069503.3-201ENST00000618674 145 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU6-832P-201ENST00000363319 107 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 SNORD50.2-201ENST00000365465 70 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU6-756P-201ENST00000383997 107 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU6-804P-201ENST00000384286 107 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU6-886P-201ENST00000384319 105 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 SNORA40-201ENST00000388090 126 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 MIR3920-201ENST00000581751 86 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 MIR1295B-201ENST00000636144 60 ntBASIC-0.01□□□□□ -2.41
COL11A1P12107 RNU6-235P-201ENST00000362644 107 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 RNU6-170P-201ENST00000362832 104 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 MIR539-201ENST00000365690 78 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 MIR519A1-201ENST00000385257 85 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 RNU6-907P-201ENST00000390924 102 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL11A1P12107 AC007012.1-201ENST00000567192 175 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 MTND5P18-201ENST00000445624 1801 ntBASIC-0.02□□□□□ -2.41
COL11A1P12107 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 SNORD114-28-201ENST00000363610 72 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 MIR548D2-201ENST00000384955 97 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 MIR216B-201ENST00000390186 82 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 MIR548I1-201ENST00000408810 149 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 RNU6-257P-201ENST00000410238 98 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 RNU4-63P-201ENST00000411313 118 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 RNU7-104P-201ENST00000459398 79 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 RNU6-772P-201ENST00000516042 105 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 MIR4679-2-201ENST00000578358 77 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 SNORA70.25-201ENST00000612741 95 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
COL11A1P12107 SNORD58C-201ENST00000365223 64 ntBASIC-0.03□□□□□ -2.42
COL11A1P12107 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.03□□□□□ -2.42
COL11A1P12107 AC093423.1-201ENST00000440817 142 ntBASIC-0.03□□□□□ -2.42
COL11A1P12107 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.03□□□□□ -2.42
COL11A1P12107 RNU7-129P-201ENST00000516128 62 ntBASIC-0.03□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms