Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
THBS1P07996 MIR9-2-201ENST00000384838 87 ntBASIC1.92□□□□□ -2.1
THBS1P07996 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
THBS1P07996 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
THBS1P07996 HMGN2P23-201ENST00000456759 269 ntBASIC1.92□□□□□ -2.1
THBS1P07996 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
THBS1P07996 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
THBS1P07996 RNU7-13P-201ENST00000516413 62 ntBASIC1.92□□□□□ -2.1
THBS1P07996 RNU6-165P-201ENST00000517170 99 ntBASIC1.92□□□□□ -2.1
THBS1P07996 AL512310.8-201ENST00000550183 120 ntBASIC1.92□□□□□ -2.1
THBS1P07996 MIR6873-201ENST00000622788 63 ntBASIC1.92□□□□□ -2.1
THBS1P07996 AC027335.2-201ENST00000624030 375 ntBASIC1.92□□□□□ -2.1
THBS1P07996 MIR337-201ENST00000362281 93 ntBASIC1.91□□□□□ -2.1
THBS1P07996 AL591806.2-201ENST00000433122 173 ntBASIC1.91□□□□□ -2.1
THBS1P07996 AL603825.1-201ENST00000438481 80 ntBASIC1.91□□□□□ -2.1
THBS1P07996 RNU7-24P-201ENST00000458867 62 ntBASIC1.91□□□□□ -2.1
THBS1P07996 MIR3198-2-201ENST00000577868 80 ntBASIC1.91□□□□□ -2.1
THBS1P07996 AL359821.1-201ENST00000605519 182 ntBASIC1.91□□□□□ -2.1
THBS1P07996 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
THBS1P07996 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
THBS1P07996 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
THBS1P07996 Y_RNA.174-201ENST00000363781 105 ntBASIC1.9□□□□□ -2.11
THBS1P07996 RNU6-382P-201ENST00000365181 106 ntBASIC1.9□□□□□ -2.11
THBS1P07996 SNORD116-24-201ENST00000384549 92 ntBASIC1.9□□□□□ -2.11
THBS1P07996 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
THBS1P07996 RNU6-482P-201ENST00000391068 107 ntBASIC1.9□□□□□ -2.11
THBS1P07996 SNORD75.2-201ENST00000408784 58 ntBASIC1.9□□□□□ -2.11
THBS1P07996 AL591704.2-201ENST00000421658 181 ntBASIC1.9□□□□□ -2.11
THBS1P07996 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
THBS1P07996 MTND4LP1-201ENST00000446263 157 ntBASIC1.9□□□□□ -2.11
THBS1P07996 AL691482.2-201ENST00000457453 84 ntBASIC1.9□□□□□ -2.11
THBS1P07996 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
THBS1P07996 AL078603.1-201ENST00000603824 313 ntBASIC1.9□□□□□ -2.11
THBS1P07996 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
THBS1P07996 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
THBS1P07996 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
THBS1P07996 SNORA64-201ENST00000384674 134 ntBASIC1.89□□□□□ -2.11
THBS1P07996 MIR2113-201ENST00000459007 91 ntBASIC1.89□□□□□ -2.11
THBS1P07996 RNA5SP245-201ENST00000364239 121 ntBASIC1.88□□□□□ -2.11
THBS1P07996 RNU6-994P-201ENST00000410507 111 ntBASIC1.88□□□□□ -2.11
THBS1P07996 AC110620.1-201ENST00000416042 228 ntBASIC1.88□□□□□ -2.11
THBS1P07996 RNU7-102P-201ENST00000458948 62 ntBASIC1.88□□□□□ -2.11
THBS1P07996 RNU7-40P-201ENST00000516397 64 ntBASIC1.88□□□□□ -2.11
THBS1P07996 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
THBS1P07996 RNU6-548P-201ENST00000517083 115 ntBASIC1.88□□□□□ -2.11
THBS1P07996 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
THBS1P07996 RNU1-119P-201ENST00000391122 165 ntBASIC1.87□□□□□ -2.11
THBS1P07996 SNORA75.2-201ENST00000391138 150 ntBASIC1.87□□□□□ -2.11
THBS1P07996 SNORA75.3-201ENST00000391231 150 ntBASIC1.87□□□□□ -2.11
THBS1P07996 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
THBS1P07996 AC048334.1-201ENST00000477975 159 ntBASIC1.87□□□□□ -2.11
THBS1P07996 RN7SKP88-201ENST00000516847 250 ntBASIC1.87□□□□□ -2.11
THBS1P07996 7SK.8-201ENST00000612110 250 ntBASIC1.87□□□□□ -2.11
THBS1P07996 7SK.11-201ENST00000615477 250 ntBASIC1.87□□□□□ -2.11
THBS1P07996 7SK.13-201ENST00000622040 250 ntBASIC1.87□□□□□ -2.11
THBS1P07996 SNORA80D-201ENST00000384488 135 ntBASIC1.86□□□□□ -2.11
THBS1P07996 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
THBS1P07996 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
THBS1P07996 RNU6-977P-201ENST00000516411 103 ntBASIC1.86□□□□□ -2.11
THBS1P07996 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
THBS1P07996 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
THBS1P07996 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
THBS1P07996 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.85□□□□□ -2.11
THBS1P07996 SNORA31.2-201ENST00000516019 134 ntBASIC1.85□□□□□ -2.11
THBS1P07996 MIR4804-201ENST00000581683 73 ntBASIC1.85□□□□□ -2.11
THBS1P07996 MIR7111-201ENST00000619751 72 ntBASIC1.85□□□□□ -2.11
THBS1P07996 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
THBS1P07996 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.84□□□□□ -2.11
THBS1P07996 RNU6-1126P-201ENST00000384002 107 ntBASIC1.84□□□□□ -2.11
THBS1P07996 SNORA40.6-201ENST00000391153 128 ntBASIC1.84□□□□□ -2.11
THBS1P07996 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.84□□□□□ -2.11
THBS1P07996 RNU6-141P-201ENST00000410499 105 ntBASIC1.84□□□□□ -2.11
THBS1P07996 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.84□□□□□ -2.11
THBS1P07996 RNA5SP458-201ENST00000516188 119 ntBASIC1.84□□□□□ -2.11
THBS1P07996 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
THBS1P07996 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.83□□□□□ -2.12
THBS1P07996 RNU6-668P-201ENST00000364180 107 ntBASIC1.83□□□□□ -2.12
THBS1P07996 Y_RNA.258-201ENST00000364613 105 ntBASIC1.83□□□□□ -2.12
THBS1P07996 MIR617-201ENST00000385030 97 ntBASIC1.83□□□□□ -2.12
THBS1P07996 RNU7-90P-201ENST00000459216 62 ntBASIC1.83□□□□□ -2.12
THBS1P07996 RNU7-21P-201ENST00000459430 62 ntBASIC1.83□□□□□ -2.12
THBS1P07996 AC023827.1-201ENST00000569247 97 ntBASIC1.83□□□□□ -2.12
THBS1P07996 MIR1-1-201ENST00000362147 71 ntBASIC1.82□□□□□ -2.12
THBS1P07996 RNU6-495P-201ENST00000362995 107 ntBASIC1.82□□□□□ -2.12
THBS1P07996 SNORD115-24-201ENST00000363528 82 ntBASIC1.82□□□□□ -2.12
THBS1P07996 RNA5SP403-201ENST00000363598 108 ntBASIC1.82□□□□□ -2.12
THBS1P07996 RNA5SP99-201ENST00000364020 114 ntBASIC1.82□□□□□ -2.12
THBS1P07996 MIR100-201ENST00000385259 80 ntBASIC1.82□□□□□ -2.12
THBS1P07996 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
THBS1P07996 SNORA26.9-201ENST00000391322 122 ntBASIC1.82□□□□□ -2.12
THBS1P07996 AC067940.1-201ENST00000458411 300 ntBASIC1.82□□□□□ -2.12
THBS1P07996 RNU7-74P-201ENST00000459104 62 ntBASIC1.82□□□□□ -2.12
THBS1P07996 RNU6-542P-201ENST00000516405 103 ntBASIC1.82□□□□□ -2.12
THBS1P07996 RNU6-135P-201ENST00000516769 101 ntBASIC1.82□□□□□ -2.12
THBS1P07996 AC073869.9-201ENST00000641610 120 ntBASIC1.82□□□□□ -2.12
THBS1P07996 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
THBS1P07996 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
THBS1P07996 RNU6-1039P-201ENST00000383931 107 ntBASIC1.81□□□□□ -2.12
THBS1P07996 RNU7-56P-201ENST00000458744 62 ntBASIC1.81□□□□□ -2.12
THBS1P07996 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms