Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 MIR548H3-201ENST00000408771 118 ntBASIC-2.08□□□□□ -2.74
TFF1P04155 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.08□□□□□ -2.74
TFF1P04155 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.09□□□□□ -2.74
TFF1P04155 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.09□□□□□ -2.74
TFF1P04155 MTATP6P19-201ENST00000413797 659 ntBASIC-2.09□□□□□ -2.74
TFF1P04155 MIR3611-201ENST00000584484 83 ntBASIC-2.09□□□□□ -2.74
TFF1P04155 AC037487.3-201ENST00000606668 112 ntBASIC-2.09□□□□□ -2.74
TFF1P04155 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.09□□□□□ -2.74
TFF1P04155 RNU6-495P-201ENST00000362995 107 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 RNU6-103P-201ENST00000363686 107 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 MIR487B-201ENST00000385021 84 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 RNU6-506P-201ENST00000516553 94 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 SNORD116.3-201ENST00000517176 78 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 AC104985.2-201ENST00000620598 500 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 AL606534.2-204ENST00000635008 178 ntBASIC-2.1□□□□□ -2.75
TFF1P04155 SNORD115-19-201ENST00000363098 82 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 SNORD115-18-201ENST00000363293 82 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 SNORD115-17-201ENST00000364612 82 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 RNU7-24P-201ENST00000458867 62 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 AP002392.1-201ENST00000537692 208 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 AC108081.1-201ENST00000604358 221 ntBASIC-2.11□□□□□ -2.75
TFF1P04155 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.12□□□□□ -2.75
TFF1P04155 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.12□□□□□ -2.75
TFF1P04155 AL353691.2-201ENST00000443795 59 ntBASIC-2.12□□□□□ -2.75
TFF1P04155 SNORD2.1-201ENST00000458762 69 ntBASIC-2.12□□□□□ -2.75
TFF1P04155 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 Y_RNA.394-201ENST00000383942 103 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 Y_RNA.463-201ENST00000384271 102 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 RNU2-16P-201ENST00000410712 136 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.13□□□□□ -2.75
TFF1P04155 SNORD58B-201ENST00000607313 66 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 AC103591.3-201ENST00000608684 209 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 AC084782.3-201ENST00000612282 578 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 U6.96-201ENST00000636425 70 ntBASIC-2.13□□□□□ -2.75
TFF1P04155 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.14□□□□□ -2.75
TFF1P04155 RNA5SP405-201ENST00000363059 114 ntBASIC-2.14□□□□□ -2.75
TFF1P04155 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.14□□□□□ -2.75
TFF1P04155 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.14□□□□□ -2.75
TFF1P04155 RNU6-240P-201ENST00000516098 97 ntBASIC-2.14□□□□□ -2.75
TFF1P04155 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.14□□□□□ -2.75
TFF1P04155 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.15□□□□□ -2.75
TFF1P04155 SNORD81.2-201ENST00000365153 76 ntBASIC-2.15□□□□□ -2.75
TFF1P04155 SNORA63.7-201ENST00000365579 123 ntBASIC-2.15□□□□□ -2.75
TFF1P04155 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.15□□□□□ -2.75
TFF1P04155 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.15□□□□□ -2.75
TFF1P04155 AC090617.8-201ENST00000623339 167 ntBASIC-2.15□□□□□ -2.75
TFF1P04155 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.16□□□□□ -2.76
TFF1P04155 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.16□□□□□ -2.76
TFF1P04155 SNORD115-27-201ENST00000364430 82 ntBASIC-2.16□□□□□ -2.76
TFF1P04155 SNORD115-22-201ENST00000364456 82 ntBASIC-2.16□□□□□ -2.76
TFF1P04155 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.16□□□□□ -2.76
TFF1P04155 FGF7P6-202ENST00000451282 293 ntBASIC-2.16□□□□□ -2.76
TFF1P04155 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.16□□□□□ -2.76
TFF1P04155 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 RNU2-51P-201ENST00000410708 197 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 RNU6-75P-201ENST00000515944 104 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 RNU6-314P-201ENST00000516574 104 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 RNU6-521P-201ENST00000516663 105 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.17□□□□□ -2.76
TFF1P04155 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.18□□□□□ -2.76
TFF1P04155 RNU6-400P-201ENST00000391173 106 ntBASIC-2.18□□□□□ -2.76
TFF1P04155 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.18□□□□□ -2.76
TFF1P04155 MIR548G-201ENST00000408442 89 ntBASIC-2.18□□□□□ -2.76
TFF1P04155 SNORD75.2-201ENST00000408784 58 ntBASIC-2.18□□□□□ -2.76
TFF1P04155 MTATP6P21-201ENST00000440681 189 ntBASIC-2.18□□□□□ -2.76
TFF1P04155 RNU6-90P-201ENST00000606352 106 ntBASIC-2.18□□□□□ -2.76
TFF1P04155 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.18□□□□□ -2.76
TFF1P04155 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 SNORD38.1-201ENST00000363863 68 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 SNORD116-6-201ENST00000384711 96 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.19□□□□□ -2.76
TFF1P04155 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 RNU7-30P-201ENST00000516835 62 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 MIR6874-201ENST00000635894 71 ntBASIC-2.19□□□□□ -2.76
TFF1P04155 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
TFF1P04155 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.2□□□□□ -2.76
TFF1P04155 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.2□□□□□ -2.76
TFF1P04155 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.2□□□□□ -2.76
TFF1P04155 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.2□□□□□ -2.76
TFF1P04155 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.2□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms