Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIRLET7F1-201ENST00000362202 87 ntBASIC1.58□□□□□ -2.16
PDGFAP04085 RNA5SP245-201ENST00000364239 121 ntBASIC1.58□□□□□ -2.16
PDGFAP04085 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
PDGFAP04085 RNU6-24P-201ENST00000384440 107 ntBASIC1.58□□□□□ -2.16
PDGFAP04085 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.58□□□□□ -2.16
PDGFAP04085 AC244505.6-201ENST00000452829 130 ntBASIC1.58□□□□□ -2.16
PDGFAP04085 RNU6-1110P-201ENST00000516462 101 ntBASIC1.58□□□□□ -2.16
PDGFAP04085 SNORD48-201ENST00000364953 64 ntBASIC1.57□□□□□ -2.16
PDGFAP04085 MIR489-201ENST00000384923 84 ntBASIC1.57□□□□□ -2.16
PDGFAP04085 RNU6-129P-201ENST00000391022 107 ntBASIC1.57□□□□□ -2.16
PDGFAP04085 Y_RNA.239-201ENST00000364444 113 ntBASIC1.56□□□□□ -2.16
PDGFAP04085 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
PDGFAP04085 MIR19B1-201ENST00000384829 87 ntBASIC1.56□□□□□ -2.16
PDGFAP04085 MIR520H-201ENST00000385126 88 ntBASIC1.56□□□□□ -2.16
PDGFAP04085 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PDGFAP04085 AL606490.4-201ENST00000423117 127 ntBASIC1.56□□□□□ -2.16
PDGFAP04085 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PDGFAP04085 RNU6-624P-201ENST00000363411 107 ntBASIC1.55□□□□□ -2.16
PDGFAP04085 SNORD101-201ENST00000384027 73 ntBASIC1.55□□□□□ -2.16
PDGFAP04085 MIR200A-201ENST00000384875 90 ntBASIC1.55□□□□□ -2.16
PDGFAP04085 SNORD89-201ENST00000390981 114 ntBASIC1.55□□□□□ -2.16
PDGFAP04085 U7.7-201ENST00000459276 60 ntBASIC1.55□□□□□ -2.16
PDGFAP04085 MIR4712-201ENST00000583750 82 ntBASIC1.55□□□□□ -2.16
PDGFAP04085 RNU6-315P-201ENST00000362666 107 ntBASIC1.54□□□□□ -2.16
PDGFAP04085 Y_RNA.596-201ENST00000410462 109 ntBASIC1.54□□□□□ -2.16
PDGFAP04085 RNU6-1265P-201ENST00000516342 103 ntBASIC1.54□□□□□ -2.16
PDGFAP04085 SNORA31.14-201ENST00000516728 116 ntBASIC1.54□□□□□ -2.16
PDGFAP04085 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
PDGFAP04085 uc_338.16-201ENST00000621804 95 ntBASIC1.54□□□□□ -2.16
PDGFAP04085 U6.100-201ENST00000636230 99 ntBASIC1.54□□□□□ -2.16
PDGFAP04085 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PDGFAP04085 RNU6-664P-201ENST00000362381 107 ntBASIC1.53□□□□□ -2.16
PDGFAP04085 Y_RNA.32-201ENST00000362589 110 ntBASIC1.53□□□□□ -2.16
PDGFAP04085 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
PDGFAP04085 Y_RNA.244-201ENST00000364484 109 ntBASIC1.53□□□□□ -2.16
PDGFAP04085 FGF7P7-201ENST00000514120 227 ntBASIC1.53□□□□□ -2.16
PDGFAP04085 AC019288.1-201ENST00000557918 224 ntBASIC1.53□□□□□ -2.16
PDGFAP04085 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.52□□□□□ -2.17
PDGFAP04085 Y_RNA.94-201ENST00000363068 106 ntBASIC1.52□□□□□ -2.17
PDGFAP04085 Y_RNA.221-201ENST00000364248 96 ntBASIC1.52□□□□□ -2.17
PDGFAP04085 MIR942-201ENST00000401111 86 ntBASIC1.52□□□□□ -2.17
PDGFAP04085 Y_RNA.660-201ENST00000516002 120 ntBASIC1.52□□□□□ -2.17
PDGFAP04085 MIR4696-201ENST00000581431 70 ntBASIC1.52□□□□□ -2.17
PDGFAP04085 SNORA25.8-201ENST00000364831 128 ntBASIC1.51□□□□□ -2.17
PDGFAP04085 Y_RNA.327-201ENST00000365201 102 ntBASIC1.51□□□□□ -2.17
PDGFAP04085 RNA5SP117-201ENST00000365294 118 ntBASIC1.51□□□□□ -2.17
PDGFAP04085 SNORD105-201ENST00000386910 85 ntBASIC1.51□□□□□ -2.17
PDGFAP04085 AL450471.1-201ENST00000447509 127 ntBASIC1.51□□□□□ -2.17
PDGFAP04085 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.51□□□□□ -2.17
PDGFAP04085 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
PDGFAP04085 RNU6-557P-201ENST00000516842 110 ntBASIC1.51□□□□□ -2.17
PDGFAP04085 MTRNR2L2-201ENST00000604882 87 ntBASIC1.51□□□□□ -2.17
PDGFAP04085 SNORA63.2-201ENST00000362603 126 ntBASIC1.5□□□□□ -2.17
PDGFAP04085 RNU6-380P-201ENST00000410207 107 ntBASIC1.5□□□□□ -2.17
PDGFAP04085 MIR6504-201ENST00000613520 61 ntBASIC1.5□□□□□ -2.17
PDGFAP04085 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PDGFAP04085 MIR1276-201ENST00000408707 83 ntBASIC1.49□□□□□ -2.17
PDGFAP04085 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.49□□□□□ -2.17
PDGFAP04085 AC002350.1-201ENST00000490759 375 ntBASIC1.49□□□□□ -2.17
PDGFAP04085 RNU6-135P-201ENST00000516769 101 ntBASIC1.49□□□□□ -2.17
PDGFAP04085 SNORD115-24-201ENST00000363528 82 ntBASIC1.48□□□□□ -2.17
PDGFAP04085 Y_RNA.224-201ENST00000364308 111 ntBASIC1.48□□□□□ -2.17
PDGFAP04085 RNU6-392P-201ENST00000364926 101 ntBASIC1.48□□□□□ -2.17
PDGFAP04085 RNY4P3-201ENST00000365254 95 ntBASIC1.48□□□□□ -2.17
PDGFAP04085 SNORD115-44-201ENST00000365391 82 ntBASIC1.48□□□□□ -2.17
PDGFAP04085 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
PDGFAP04085 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
PDGFAP04085 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
PDGFAP04085 RNU6-478P-201ENST00000363904 110 ntBASIC1.47□□□□□ -2.17
PDGFAP04085 RNU6-686P-201ENST00000364839 107 ntBASIC1.47□□□□□ -2.17
PDGFAP04085 RNU6-935P-201ENST00000410371 100 ntBASIC1.47□□□□□ -2.17
PDGFAP04085 SNORD124-201ENST00000459577 104 ntBASIC1.47□□□□□ -2.17
PDGFAP04085 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
PDGFAP04085 RNU6-1094P-201ENST00000362416 104 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 RNU5F-1-201ENST00000362507 117 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 Y_RNA.264-201ENST00000364665 102 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 SNORD114-24-201ENST00000365029 72 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 RNU6-1051P-201ENST00000365471 102 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 SNORD77.2-201ENST00000391045 68 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 RNU6-469P-201ENST00000516253 101 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 RNU7-13P-201ENST00000516413 62 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 AC025627.3-201ENST00000582078 182 ntBASIC1.46□□□□□ -2.18
PDGFAP04085 MIR26B-201ENST00000362251 77 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 RNU6-161P-201ENST00000363051 106 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 RNU1-124P-201ENST00000363861 145 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 RNU6-42P-201ENST00000384165 107 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 MIR7-2-201ENST00000384970 110 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 RNU6-1108P-201ENST00000516308 104 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 RNA5SP404-201ENST00000517118 132 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 RNU6-1057P-201ENST00000517162 102 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 MIR4662A-201ENST00000637499 67 ntBASIC1.45□□□□□ -2.18
PDGFAP04085 SNORA7.1-201ENST00000363750 139 ntBASIC1.44□□□□□ -2.18
PDGFAP04085 SNORA67.6-201ENST00000391093 99 ntBASIC1.44□□□□□ -2.18
PDGFAP04085 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
PDGFAP04085 RNU6-208P-201ENST00000362431 107 ntBASIC1.43□□□□□ -2.18
PDGFAP04085 RNA5SP403-201ENST00000363598 108 ntBASIC1.43□□□□□ -2.18
PDGFAP04085 Y_RNA.207-201ENST00000364142 106 ntBASIC1.43□□□□□ -2.18
PDGFAP04085 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 301.2 ms