Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MIR501-201ENST00000390204 84 ntBASIC-0.05□□□□□ -2.42
RTN3O95197 SNORA7.5-201ENST00000410672 110 ntBASIC-0.05□□□□□ -2.42
RTN3O95197 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.05□□□□□ -2.42
RTN3O95197 AC141557.1-201ENST00000540982 400 ntBASIC-0.05□□□□□ -2.42
RTN3O95197 uc_338.28-201ENST00000612082 187 ntBASIC-0.05□□□□□ -2.42
RTN3O95197 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.06□□□□□ -2.42
RTN3O95197 SNORD114-15-201ENST00000364687 72 ntBASIC-0.06□□□□□ -2.42
RTN3O95197 MIR145-201ENST00000384967 88 ntBASIC-0.06□□□□□ -2.42
RTN3O95197 RNU7-106P-201ENST00000459514 67 ntBASIC-0.06□□□□□ -2.42
RTN3O95197 MIR3920-201ENST00000581751 86 ntBASIC-0.06□□□□□ -2.42
RTN3O95197 MIR548AD-201ENST00000584780 82 ntBASIC-0.06□□□□□ -2.42
RTN3O95197 AL512310.12-203ENST00000640543 90 ntBASIC-0.06□□□□□ -2.42
RTN3O95197 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.07□□□□□ -2.42
RTN3O95197 RNU6-363P-201ENST00000362895 105 ntBASIC-0.07□□□□□ -2.42
RTN3O95197 RNY4P6-201ENST00000363667 96 ntBASIC-0.07□□□□□ -2.42
RTN3O95197 RNU6-302P-201ENST00000365249 107 ntBASIC-0.07□□□□□ -2.42
RTN3O95197 MIR604-201ENST00000384880 94 ntBASIC-0.07□□□□□ -2.42
RTN3O95197 RNA5SP272-201ENST00000516095 111 ntBASIC-0.07□□□□□ -2.42
RTN3O95197 RNU7-200P-201ENST00000516105 62 ntBASIC-0.07□□□□□ -2.42
RTN3O95197 AC025166.1-201ENST00000612411 163 ntBASIC-0.07□□□□□ -2.42
RTN3O95197 RNU6-235P-201ENST00000362644 107 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 RNA5SP331-201ENST00000364986 107 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 SNORD58C-201ENST00000365223 64 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 MIR516A2-201ENST00000384888 90 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 MIR516A1-201ENST00000385033 90 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
RTN3O95197 AC006210.1-201ENST00000424882 111 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 AC108676.2-201ENST00000605225 163 ntBASIC-0.08□□□□□ -2.42
RTN3O95197 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
RTN3O95197 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.09□□□□□ -2.42
RTN3O95197 MIR214-201ENST00000385214 110 ntBASIC-0.09□□□□□ -2.42
RTN3O95197 SNORD110-201ENST00000408189 75 ntBASIC-0.09□□□□□ -2.42
RTN3O95197 MTND4LP9-201ENST00000427694 174 ntBASIC-0.09□□□□□ -2.42
RTN3O95197 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.09□□□□□ -2.42
RTN3O95197 RNU6-161P-201ENST00000363051 106 ntBASIC-0.1□□□□□ -2.43
RTN3O95197 SNORD95.1-201ENST00000364099 68 ntBASIC-0.1□□□□□ -2.43
RTN3O95197 RNU6-409P-201ENST00000384114 104 ntBASIC-0.1□□□□□ -2.43
RTN3O95197 SNORA40-201ENST00000388090 126 ntBASIC-0.1□□□□□ -2.43
RTN3O95197 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.1□□□□□ -2.43
RTN3O95197 MIR101-1-201ENST00000362265 75 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 SNORD38.1-201ENST00000363863 68 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 SNORD115-44-201ENST00000365391 82 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 MIR106A-201ENST00000384870 81 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 SPINT5P-201ENST00000448174 155 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 RNA5SP484-201ENST00000458857 111 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 NAMPTP3-201ENST00000569273 224 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 MIR3925-201ENST00000584674 77 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.11□□□□□ -2.43
RTN3O95197 MTND5P18-201ENST00000445624 1801 ntBASIC-0.12□□□□□ -2.43
RTN3O95197 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.12□□□□□ -2.43
RTN3O95197 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.12□□□□□ -2.43
RTN3O95197 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.12□□□□□ -2.43
RTN3O95197 MIR4677-201ENST00000584153 80 ntBASIC-0.12□□□□□ -2.43
RTN3O95197 RNU6-90P-201ENST00000606352 106 ntBASIC-0.12□□□□□ -2.43
RTN3O95197 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.13□□□□□ -2.43
RTN3O95197 MIR548G-201ENST00000408442 89 ntBASIC-0.13□□□□□ -2.43
RTN3O95197 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.14□□□□□ -2.43
RTN3O95197 RNY1P5-201ENST00000383890 115 ntBASIC-0.14□□□□□ -2.43
RTN3O95197 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.14□□□□□ -2.43
RTN3O95197 RNU6-243P-201ENST00000391140 107 ntBASIC-0.14□□□□□ -2.43
RTN3O95197 HMGN2P22-201ENST00000427588 175 ntBASIC-0.14□□□□□ -2.43
RTN3O95197 MIR4645-201ENST00000583158 77 ntBASIC-0.14□□□□□ -2.43
RTN3O95197 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.14□□□□□ -2.43
RTN3O95197 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.14□□□□□ -2.43
RTN3O95197 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.14□□□□□ -2.43
RTN3O95197 MIR409-201ENST00000362237 79 ntBASIC-0.15□□□□□ -2.43
RTN3O95197 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.15□□□□□ -2.43
RTN3O95197 RNA5SP163-201ENST00000410304 99 ntBASIC-0.15□□□□□ -2.43
RTN3O95197 AL353813.1-201ENST00000440700 253 ntBASIC-0.15□□□□□ -2.43
RTN3O95197 RNU7-159P-201ENST00000459284 62 ntBASIC-0.15□□□□□ -2.43
RTN3O95197 AC104692.1-201ENST00000472406 90 ntBASIC-0.15□□□□□ -2.43
RTN3O95197 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.15□□□□□ -2.43
RTN3O95197 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 MIR539-201ENST00000365690 78 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 MIR617-201ENST00000385030 97 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 RNU6-816P-201ENST00000390914 107 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 SNORA75.1-201ENST00000391130 148 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 RNU6-257P-201ENST00000410238 98 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 RNU6-772P-201ENST00000516042 105 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 AL162726.3-218ENST00000636401 95 ntBASIC-0.16□□□□□ -2.44
RTN3O95197 RNU1-141P-201ENST00000364623 158 ntBASIC-0.17□□□□□ -2.44
RTN3O95197 RNU7-165P-201ENST00000458864 60 ntBASIC-0.17□□□□□ -2.44
RTN3O95197 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.17□□□□□ -2.44
RTN3O95197 AL670379.3-201ENST00000605040 251 ntBASIC-0.17□□□□□ -2.44
RTN3O95197 SNORD36A-201ENST00000362874 73 ntBASIC-0.18□□□□□ -2.44
RTN3O95197 SNORD114-28-201ENST00000363610 72 ntBASIC-0.18□□□□□ -2.44
RTN3O95197 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.18□□□□□ -2.44
RTN3O95197 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.18□□□□□ -2.44
RTN3O95197 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.18□□□□□ -2.44
RTN3O95197 SNORA25.13-201ENST00000516395 103 ntBASIC-0.18□□□□□ -2.44
RTN3O95197 RNU6-255P-201ENST00000516957 105 ntBASIC-0.18□□□□□ -2.44
RTN3O95197 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.18□□□□□ -2.44
RTN3O95197 AL442128.1-201ENST00000615151 90 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 438.3 ms