Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
TRIM13O60858 AC103706.3-201ENST00000636297 85 ntBASIC1.55□□□□□ -2.16
TRIM13O60858 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM13O60858 MIR125B2-201ENST00000385128 89 ntBASIC1.54□□□□□ -2.16
TRIM13O60858 RNU6-1177P-201ENST00000391058 104 ntBASIC1.54□□□□□ -2.16
TRIM13O60858 RNU6-752P-201ENST00000516376 102 ntBASIC1.54□□□□□ -2.16
TRIM13O60858 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
TRIM13O60858 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
TRIM13O60858 Y_RNA.258-201ENST00000364613 105 ntBASIC1.53□□□□□ -2.16
TRIM13O60858 RNU6-669P-201ENST00000365575 107 ntBASIC1.53□□□□□ -2.16
TRIM13O60858 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRIM13O60858 RNU6-165P-201ENST00000517170 99 ntBASIC1.53□□□□□ -2.16
TRIM13O60858 AL512310.8-201ENST00000550183 120 ntBASIC1.53□□□□□ -2.16
TRIM13O60858 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
TRIM13O60858 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.53□□□□□ -2.16
TRIM13O60858 SNORD114-1-201ENST00000362705 72 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 RNA5SP245-201ENST00000364239 121 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 SNORD113.3-201ENST00000364630 78 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 RNU6-934P-201ENST00000365154 107 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRIM13O60858 U3.27-201ENST00000391237 200 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 RNU6-274P-201ENST00000459566 107 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 MIR4771-2-201ENST00000577758 74 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 MIR4771-1-201ENST00000582617 74 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 MIR4773-1-201ENST00000637203 78 ntBASIC1.52□□□□□ -2.17
TRIM13O60858 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRIM13O60858 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRIM13O60858 RNU6-382P-201ENST00000365181 106 ntBASIC1.51□□□□□ -2.17
TRIM13O60858 AC110620.1-201ENST00000416042 228 ntBASIC1.51□□□□□ -2.17
TRIM13O60858 AC036111.3-201ENST00000526389 112 ntBASIC1.51□□□□□ -2.17
TRIM13O60858 MIR3945-201ENST00000581853 98 ntBASIC1.51□□□□□ -2.17
TRIM13O60858 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.51□□□□□ -2.17
TRIM13O60858 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
TRIM13O60858 RNU6-535P-201ENST00000384722 107 ntBASIC1.5□□□□□ -2.17
TRIM13O60858 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
TRIM13O60858 AC244505.6-201ENST00000452829 130 ntBASIC1.5□□□□□ -2.17
TRIM13O60858 RNU6-1057P-201ENST00000517162 102 ntBASIC1.5□□□□□ -2.17
TRIM13O60858 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.49□□□□□ -2.17
TRIM13O60858 AC244098.3-201ENST00000424803 96 ntBASIC1.49□□□□□ -2.17
TRIM13O60858 RNU6-287P-201ENST00000516230 98 ntBASIC1.49□□□□□ -2.17
TRIM13O60858 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
TRIM13O60858 AC008608.1-201ENST00000603910 127 ntBASIC1.49□□□□□ -2.17
TRIM13O60858 BX248123.2-201ENST00000606318 124 ntBASIC1.49□□□□□ -2.17
TRIM13O60858 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
TRIM13O60858 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
TRIM13O60858 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
TRIM13O60858 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM13O60858 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM13O60858 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 Y_RNA.330-201ENST00000365230 109 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 SNORD115-44-201ENST00000365391 82 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 RN7SL429P-201ENST00000479090 223 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 RN7SL489P-201ENST00000486185 223 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 RN7SL327P-201ENST00000488659 223 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 MIR4676-201ENST00000583078 72 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 MIR6845-201ENST00000613182 61 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 RN7SL853P-201ENST00000617250 223 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 AL109933.3-201ENST00000619095 188 ntBASIC1.48□□□□□ -2.17
TRIM13O60858 MIR504-201ENST00000385065 83 ntBASIC1.47□□□□□ -2.17
TRIM13O60858 SNORA75.2-201ENST00000391138 150 ntBASIC1.47□□□□□ -2.17
TRIM13O60858 SNORA75.3-201ENST00000391231 150 ntBASIC1.47□□□□□ -2.17
TRIM13O60858 RNU6-141P-201ENST00000410499 105 ntBASIC1.47□□□□□ -2.17
TRIM13O60858 RPS26P5-201ENST00000418544 335 ntBASIC1.47□□□□□ -2.17
TRIM13O60858 RNU7-40P-201ENST00000516397 64 ntBASIC1.47□□□□□ -2.17
TRIM13O60858 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.47□□□□□ -2.17
TRIM13O60858 AC069503.3-201ENST00000618674 145 ntBASIC1.47□□□□□ -2.17
TRIM13O60858 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TRIM13O60858 RNU6-1187P-201ENST00000364771 110 ntBASIC1.46□□□□□ -2.18
TRIM13O60858 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
TRIM13O60858 SNORD75.2-201ENST00000408784 58 ntBASIC1.46□□□□□ -2.18
TRIM13O60858 AC079150.2-201ENST00000443733 78 ntBASIC1.46□□□□□ -2.18
TRIM13O60858 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
TRIM13O60858 AL078603.1-201ENST00000603824 313 ntBASIC1.46□□□□□ -2.18
TRIM13O60858 AC106800.4-201ENST00000614905 153 ntBASIC1.46□□□□□ -2.18
TRIM13O60858 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM13O60858 RNU6-364P-201ENST00000384387 107 ntBASIC1.45□□□□□ -2.18
TRIM13O60858 MIR938-201ENST00000401216 83 ntBASIC1.45□□□□□ -2.18
TRIM13O60858 SNORD111-201ENST00000408139 94 ntBASIC1.45□□□□□ -2.18
TRIM13O60858 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
TRIM13O60858 RNU7-24P-201ENST00000458867 62 ntBASIC1.45□□□□□ -2.18
TRIM13O60858 AC048334.1-201ENST00000477975 159 ntBASIC1.45□□□□□ -2.18
TRIM13O60858 RNU6-982P-201ENST00000516216 102 ntBASIC1.45□□□□□ -2.18
TRIM13O60858 RNU6-369P-201ENST00000362515 102 ntBASIC1.44□□□□□ -2.18
TRIM13O60858 MIR633-201ENST00000384821 98 ntBASIC1.44□□□□□ -2.18
TRIM13O60858 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
TRIM13O60858 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.44□□□□□ -2.18
TRIM13O60858 AL691482.2-201ENST00000457453 84 ntBASIC1.44□□□□□ -2.18
TRIM13O60858 RNU7-102P-201ENST00000458948 62 ntBASIC1.44□□□□□ -2.18
TRIM13O60858 snoU13.15-201ENST00000459407 104 ntBASIC1.44□□□□□ -2.18
TRIM13O60858 RNU7-13P-201ENST00000516413 62 ntBASIC1.44□□□□□ -2.18
TRIM13O60858 AC027335.2-201ENST00000624030 375 ntBASIC1.44□□□□□ -2.18
TRIM13O60858 RNU6-495P-201ENST00000362995 107 ntBASIC1.43□□□□□ -2.18
TRIM13O60858 Y_RNA.363-201ENST00000365529 113 ntBASIC1.43□□□□□ -2.18
TRIM13O60858 RNU6-1126P-201ENST00000384002 107 ntBASIC1.43□□□□□ -2.18
TRIM13O60858 RNU6-977P-201ENST00000516411 103 ntBASIC1.43□□□□□ -2.18
TRIM13O60858 MIR548AG2-201ENST00000581228 64 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms