Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 RNU6-35P-201ENST00000384530 107 ntBASIC2.21□□□□□ -2.06
H3BM21 MIR630-201ENST00000384957 97 ntBASIC2.21□□□□□ -2.06
H3BM21 SNORD83.1-201ENST00000411362 77 ntBASIC2.21□□□□□ -2.06
H3BM21 AL161935.2-201ENST00000414627 60 ntBASIC2.21□□□□□ -2.06
H3BM21 RNU7-13P-201ENST00000516413 62 ntBASIC2.21□□□□□ -2.06
H3BM21 RNU6-980P-201ENST00000516925 103 ntBASIC2.21□□□□□ -2.06
H3BM21 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
H3BM21 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
H3BM21 SNORA2.1-201ENST00000363089 137 ntBASIC2.2□□□□□ -2.06
H3BM21 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
H3BM21 MIR216B-201ENST00000390186 82 ntBASIC2.2□□□□□ -2.06
H3BM21 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.2□□□□□ -2.06
H3BM21 AL133373.1-201ENST00000497098 94 ntBASIC2.2□□□□□ -2.06
H3BM21 RNA5SP147-201ENST00000516493 109 ntBASIC2.2□□□□□ -2.06
H3BM21 MIR548AG2-201ENST00000581228 64 ntBASIC2.2□□□□□ -2.06
H3BM21 GHRLOS.1-201ENST00000610995 70 ntBASIC2.2□□□□□ -2.06
H3BM21 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.2□□□□□ -2.06
H3BM21 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
H3BM21 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
H3BM21 SNORD114-1-201ENST00000362705 72 ntBASIC2.19□□□□□ -2.06
H3BM21 RNA5SP264-201ENST00000363115 107 ntBASIC2.19□□□□□ -2.06
H3BM21 RNU6-1126P-201ENST00000384002 107 ntBASIC2.19□□□□□ -2.06
H3BM21 RNU6-930P-201ENST00000390938 100 ntBASIC2.19□□□□□ -2.06
H3BM21 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.19□□□□□ -2.06
H3BM21 AC244505.6-201ENST00000452829 130 ntBASIC2.19□□□□□ -2.06
H3BM21 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
H3BM21 MIR548C-201ENST00000384815 97 ntBASIC2.18□□□□□ -2.06
H3BM21 MIR125B2-201ENST00000385128 89 ntBASIC2.18□□□□□ -2.06
H3BM21 RNA5SP247-201ENST00000411181 105 ntBASIC2.18□□□□□ -2.06
H3BM21 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
H3BM21 RNU6-250P-201ENST00000516958 103 ntBASIC2.18□□□□□ -2.06
H3BM21 AC008608.1-201ENST00000603910 127 ntBASIC2.18□□□□□ -2.06
H3BM21 AL645939.4-201ENST00000604495 135 ntBASIC2.18□□□□□ -2.06
H3BM21 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
H3BM21 MIR548O2-201ENST00000616090 70 ntBASIC2.18□□□□□ -2.06
H3BM21 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
H3BM21 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
H3BM21 MIR6739-201ENST00000622461 75 ntBASIC2.17□□□□□ -2.06
H3BM21 MIR219B-201ENST00000637023 88 ntBASIC2.17□□□□□ -2.06
H3BM21 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.17□□□□□ -2.06
H3BM21 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
H3BM21 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
H3BM21 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
H3BM21 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
H3BM21 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
H3BM21 SNORD42B-201ENST00000458893 67 ntBASIC2.16□□□□□ -2.06
H3BM21 SNORA40.17-201ENST00000517256 115 ntBASIC2.16□□□□□ -2.06
H3BM21 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.07
H3BM21 RNA5SP276-201ENST00000362580 94 ntBASIC2.15□□□□□ -2.07
H3BM21 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
H3BM21 RNA5SP458-201ENST00000516188 119 ntBASIC2.15□□□□□ -2.07
H3BM21 AL353997.5-201ENST00000618886 171 ntBASIC2.15□□□□□ -2.07
H3BM21 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
H3BM21 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.14□□□□□ -2.07
H3BM21 RNU6-990P-201ENST00000364385 104 ntBASIC2.14□□□□□ -2.07
H3BM21 RNU6-934P-201ENST00000365154 107 ntBASIC2.14□□□□□ -2.07
H3BM21 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
H3BM21 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
H3BM21 SNORD113-2-201ENST00000391082 72 ntBASIC2.14□□□□□ -2.07
H3BM21 AL157398.1-201ENST00000452981 186 ntBASIC2.14□□□□□ -2.07
H3BM21 MIR4771-2-201ENST00000577758 74 ntBASIC2.14□□□□□ -2.07
H3BM21 MIR4771-1-201ENST00000582617 74 ntBASIC2.14□□□□□ -2.07
H3BM21 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.14□□□□□ -2.07
H3BM21 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
H3BM21 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
H3BM21 JTBP1-201ENST00000441314 247 ntBASIC2.13□□□□□ -2.07
H3BM21 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.13□□□□□ -2.07
H3BM21 MIR617-201ENST00000385030 97 ntBASIC2.12□□□□□ -2.07
H3BM21 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
H3BM21 AC067940.1-201ENST00000458411 300 ntBASIC2.12□□□□□ -2.07
H3BM21 RNU7-119P-201ENST00000459279 63 ntBASIC2.12□□□□□ -2.07
H3BM21 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
H3BM21 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
H3BM21 RNU4-33P-201ENST00000364316 85 ntBASIC2.11□□□□□ -2.07
H3BM21 RNU6V-201ENST00000384105 107 ntBASIC2.11□□□□□ -2.07
H3BM21 MIR548F3-201ENST00000408509 87 ntBASIC2.11□□□□□ -2.07
H3BM21 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
H3BM21 HMGN2P23-201ENST00000456759 269 ntBASIC2.11□□□□□ -2.07
H3BM21 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
H3BM21 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
H3BM21 RNU6-698P-201ENST00000363523 107 ntBASIC2.1□□□□□ -2.07
H3BM21 RNU6-34P-201ENST00000364874 107 ntBASIC2.1□□□□□ -2.07
H3BM21 Y_RNA.330-201ENST00000365230 109 ntBASIC2.1□□□□□ -2.07
H3BM21 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
H3BM21 MIR517B-201ENST00000385102 67 ntBASIC2.1□□□□□ -2.07
H3BM21 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
H3BM21 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
H3BM21 RNA5SP403-201ENST00000363598 108 ntBASIC2.09□□□□□ -2.07
H3BM21 RNU6-1162P-201ENST00000384443 104 ntBASIC2.09□□□□□ -2.07
H3BM21 MIR519E-201ENST00000385075 84 ntBASIC2.09□□□□□ -2.07
H3BM21 U4.4-201ENST00000620626 117 ntBASIC2.09□□□□□ -2.07
H3BM21 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
H3BM21 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
H3BM21 SNORD115-24-201ENST00000363528 82 ntBASIC2.08□□□□□ -2.08
H3BM21 RNU6-439P-201ENST00000384188 106 ntBASIC2.08□□□□□ -2.08
H3BM21 SNORA67.3-201ENST00000384366 140 ntBASIC2.08□□□□□ -2.08
H3BM21 RNU6-364P-201ENST00000384387 107 ntBASIC2.08□□□□□ -2.08
H3BM21 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
H3BM21 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.08□□□□□ -2.08
H3BM21 AC018659.1-201ENST00000551083 169 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 238.5 ms