Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MIR9-1-201ENST00000385198 89 ntBASIC2.65□□□□□ -1.99
PCDHGA4Q9Y5G9 RNA5SP212-201ENST00000391223 107 ntBASIC2.65□□□□□ -1.99
PCDHGA4Q9Y5G9 AC008413.1-201ENST00000511864 177 ntBASIC2.65□□□□□ -1.99
PCDHGA4Q9Y5G9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PCDHGA4Q9Y5G9 SNORD113.3-201ENST00000364630 78 ntBASIC2.64□□□□□ -1.99
PCDHGA4Q9Y5G9 RNA5SP299-201ENST00000391203 116 ntBASIC2.64□□□□□ -1.99
PCDHGA4Q9Y5G9 AL138827.1-201ENST00000402666 306 ntBASIC2.64□□□□□ -1.99
PCDHGA4Q9Y5G9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDHGA4Q9Y5G9 RNU6-1184P-201ENST00000384588 108 ntBASIC2.63□□□□□ -1.99
PCDHGA4Q9Y5G9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PCDHGA4Q9Y5G9 RNU1-41P-201ENST00000516161 162 ntBASIC2.63□□□□□ -1.99
PCDHGA4Q9Y5G9 RNU1-48P-201ENST00000516400 162 ntBASIC2.63□□□□□ -1.99
PCDHGA4Q9Y5G9 MIR3664-201ENST00000579074 99 ntBASIC2.63□□□□□ -1.99
PCDHGA4Q9Y5G9 MIR3938-201ENST00000582157 103 ntBASIC2.63□□□□□ -1.99
PCDHGA4Q9Y5G9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDHGA4Q9Y5G9 RNA5SP215-201ENST00000363440 122 ntBASIC2.62□□□□□ -1.99
PCDHGA4Q9Y5G9 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
PCDHGA4Q9Y5G9 RNA5SP21-201ENST00000410917 96 ntBASIC2.62□□□□□ -1.99
PCDHGA4Q9Y5G9 RNU6-122P-201ENST00000516818 107 ntBASIC2.62□□□□□ -1.99
PCDHGA4Q9Y5G9 MIR6817-201ENST00000615588 66 ntBASIC2.62□□□□□ -1.99
PCDHGA4Q9Y5G9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHGA4Q9Y5G9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 RNU6-1126P-201ENST00000384002 107 ntBASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 SNORA67.3-201ENST00000384366 140 ntBASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 RNA5SP24-201ENST00000516478 95 ntBASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 MIR3657-201ENST00000584818 117 ntBASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 AC245884.12-201ENST00000615364 59 ntBASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PCDHGA4Q9Y5G9 RNA5SP68-201ENST00000363885 119 ntBASIC2.6□□□□□ -1.99
PCDHGA4Q9Y5G9 SNORD113-4-201ENST00000364802 75 ntBASIC2.6□□□□□ -1.99
PCDHGA4Q9Y5G9 RNU6-364P-201ENST00000384387 107 ntBASIC2.6□□□□□ -1.99
PCDHGA4Q9Y5G9 MIR7-2-201ENST00000384970 110 ntBASIC2.6□□□□□ -1.99
PCDHGA4Q9Y5G9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PCDHGA4Q9Y5G9 RNU6-237P-201ENST00000515985 71 ntBASIC2.6□□□□□ -1.99
PCDHGA4Q9Y5G9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHGA4Q9Y5G9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PCDHGA4Q9Y5G9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGA4Q9Y5G9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGA4Q9Y5G9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGA4Q9Y5G9 MIR7843-201ENST00000622274 79 ntBASIC2.59□□□□□ -1.99
PCDHGA4Q9Y5G9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 RNA5SP276-201ENST00000362580 94 ntBASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 RNA5SP148-201ENST00000516527 94 ntBASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 AC036111.3-201ENST00000526389 112 ntBASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 MIR548AG2-201ENST00000581228 64 ntBASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 MIR4676-201ENST00000583078 72 ntBASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 MIR8074-201ENST00000615081 81 ntBASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
PCDHGA4Q9Y5G9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 Y_RNA.330-201ENST00000365230 109 ntBASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 RNU6-260P-201ENST00000384092 107 ntBASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 RPS26P5-201ENST00000418544 335 ntBASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 SNORD53-201ENST00000579969 78 ntBASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 RNU6-92P-201ENST00000605893 104 ntBASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 MIR548O2-201ENST00000616090 70 ntBASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PCDHGA4Q9Y5G9 RNU6-302P-201ENST00000365249 107 ntBASIC2.56□□□□□ -2
PCDHGA4Q9Y5G9 MIR938-201ENST00000401216 83 ntBASIC2.56□□□□□ -2
PCDHGA4Q9Y5G9 SUMO2P12-201ENST00000405924 140 ntBASIC2.56□□□□□ -2
PCDHGA4Q9Y5G9 snoU13.26-201ENST00000459452 105 ntBASIC2.56□□□□□ -2
PCDHGA4Q9Y5G9 AC055731.1-201ENST00000474387 401 ntBASIC2.56□□□□□ -2
PCDHGA4Q9Y5G9 MIR8063-201ENST00000621930 81 ntBASIC2.56□□□□□ -2
PCDHGA4Q9Y5G9 AC027335.2-201ENST00000624030 375 ntBASIC2.56□□□□□ -2
PCDHGA4Q9Y5G9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA4Q9Y5G9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA4Q9Y5G9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA4Q9Y5G9 MIR504-201ENST00000385065 83 ntBASIC2.55□□□□□ -2
PCDHGA4Q9Y5G9 MIR4635-201ENST00000583759 79 ntBASIC2.55□□□□□ -2
PCDHGA4Q9Y5G9 RNA5SP403-201ENST00000363598 108 ntBASIC2.54□□□□□ -2
PCDHGA4Q9Y5G9 MIR617-201ENST00000385030 97 ntBASIC2.54□□□□□ -2
PCDHGA4Q9Y5G9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
PCDHGA4Q9Y5G9 HMGN2P38-201ENST00000423806 265 ntBASIC2.54□□□□□ -2
PCDHGA4Q9Y5G9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCDHGA4Q9Y5G9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PCDHGA4Q9Y5G9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
PCDHGA4Q9Y5G9 RNU6-54P-201ENST00000365563 107 ntBASIC2.53□□□□□ -2
PCDHGA4Q9Y5G9 SNORA3.2-201ENST00000408221 125 ntBASIC2.53□□□□□ -2
PCDHGA4Q9Y5G9 RNU7-102P-201ENST00000458948 62 ntBASIC2.53□□□□□ -2
PCDHGA4Q9Y5G9 RNU6-1089P-201ENST00000516473 104 ntBASIC2.53□□□□□ -2
PCDHGA4Q9Y5G9 MIR4524B-201ENST00000581569 115 ntBASIC2.53□□□□□ -2
PCDHGA4Q9Y5G9 MIR4769-201ENST00000584126 77 ntBASIC2.53□□□□□ -2
PCDHGA4Q9Y5G9 SNORA2.1-201ENST00000363089 137 ntBASIC2.52□□□□□ -2.01
PCDHGA4Q9Y5G9 SNORD115-24-201ENST00000363528 82 ntBASIC2.52□□□□□ -2.01
PCDHGA4Q9Y5G9 SNORD111-201ENST00000408139 94 ntBASIC2.52□□□□□ -2.01
PCDHGA4Q9Y5G9 AC067940.1-201ENST00000458411 300 ntBASIC2.52□□□□□ -2.01
PCDHGA4Q9Y5G9 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
PCDHGA4Q9Y5G9 RNU7-40P-201ENST00000516397 64 ntBASIC2.52□□□□□ -2.01
PCDHGA4Q9Y5G9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHGA4Q9Y5G9 RNU6-656P-201ENST00000516785 107 ntBASIC2.51□□□□□ -2.01
PCDHGA4Q9Y5G9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.51□□□□□ -2.01
PCDHGA4Q9Y5G9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.5□□□□□ -2.01
PCDHGA4Q9Y5G9 AL773524.1-201ENST00000614065 229 ntBASIC2.5□□□□□ -2.01
PCDHGA4Q9Y5G9 AC106800.4-201ENST00000614905 153 ntBASIC2.5□□□□□ -2.01
PCDHGA4Q9Y5G9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA4Q9Y5G9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms