Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIR29C-201ENST00000385231 88 ntBASIC2.71□□□□□ -1.98
PDZRN3Q9UPQ7 RNA5SP182-201ENST00000516064 82 ntBASIC2.71□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6-645P-201ENST00000364649 106 ntBASIC2.7□□□□□ -1.98
PDZRN3Q9UPQ7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.7□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6-1265P-201ENST00000516342 103 ntBASIC2.7□□□□□ -1.98
PDZRN3Q9UPQ7 MIR4264-201ENST00000583520 66 ntBASIC2.7□□□□□ -1.98
PDZRN3Q9UPQ7 AC013244.2-201ENST00000603396 103 ntBASIC2.7□□□□□ -1.98
PDZRN3Q9UPQ7 AP000553.5-201ENST00000641933 54 ntBASIC2.7□□□□□ -1.98
PDZRN3Q9UPQ7 MIR101-2-201ENST00000362195 79 ntBASIC2.69□□□□□ -1.98
PDZRN3Q9UPQ7 Y_RNA.56-201ENST00000362798 112 ntBASIC2.69□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6-35P-201ENST00000384530 107 ntBASIC2.69□□□□□ -1.98
PDZRN3Q9UPQ7 MIR144-201ENST00000384886 86 ntBASIC2.69□□□□□ -1.98
PDZRN3Q9UPQ7 U3.27-201ENST00000391237 200 ntBASIC2.69□□□□□ -1.98
PDZRN3Q9UPQ7 RNU7-62P-201ENST00000458856 62 ntBASIC2.69□□□□□ -1.98
PDZRN3Q9UPQ7 RNU7-193P-201ENST00000516723 65 ntBASIC2.69□□□□□ -1.98
PDZRN3Q9UPQ7 uc_338.10-201ENST00000621872 182 ntBASIC2.69□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6-112P-201ENST00000363599 104 ntBASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 RNA5SP48-201ENST00000363969 126 ntBASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6-396P-201ENST00000365369 105 ntBASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6-1039P-201ENST00000383931 107 ntBASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 SNORD75.2-201ENST00000408784 58 ntBASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 Y_RNA.697-201ENST00000516776 113 ntBASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6-980P-201ENST00000516925 103 ntBASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 AC103810.8-201ENST00000607347 118 ntBASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDZRN3Q9UPQ7 RNA5SP215-201ENST00000363440 122 ntBASIC2.67□□□□□ -1.98
PDZRN3Q9UPQ7 RNA5SP160-201ENST00000364866 120 ntBASIC2.67□□□□□ -1.98
PDZRN3Q9UPQ7 MIR653-201ENST00000385279 96 ntBASIC2.67□□□□□ -1.98
PDZRN3Q9UPQ7 SNORD93-201ENST00000408813 74 ntBASIC2.67□□□□□ -1.98
PDZRN3Q9UPQ7 AC097635.1-201ENST00000450678 155 ntBASIC2.67□□□□□ -1.98
PDZRN3Q9UPQ7 MIR4498-201ENST00000577599 66 ntBASIC2.67□□□□□ -1.98
PDZRN3Q9UPQ7 MIR4529-201ENST00000578110 78 ntBASIC2.67□□□□□ -1.98
PDZRN3Q9UPQ7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6-403P-201ENST00000363163 104 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 RNU1-36P-201ENST00000365130 165 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 RNU11-3P-201ENST00000391111 133 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 MIR1283-2-201ENST00000408621 87 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 RNA5SP338-201ENST00000410495 85 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 RNU7-24P-201ENST00000458867 62 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 RNA5SP481-201ENST00000516814 122 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 AC015688.6-201ENST00000577737 104 ntBASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PDZRN3Q9UPQ7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PDZRN3Q9UPQ7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 MIR203A-201ENST00000384836 110 ntBASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 MIR583-201ENST00000384846 75 ntBASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-717P-201ENST00000459076 104 ntBASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 RPL30P7-201ENST00000479312 323 ntBASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 MIR3192-201ENST00000584920 77 ntBASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 MIR6845-201ENST00000613182 61 ntBASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 MIR6509-201ENST00000614603 85 ntBASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PDZRN3Q9UPQ7 SUMO2P12-201ENST00000405924 140 ntBASIC2.64□□□□□ -1.99
PDZRN3Q9UPQ7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-495P-201ENST00000362995 107 ntBASIC2.63□□□□□ -1.99
PDZRN3Q9UPQ7 RNU1-17P-201ENST00000363022 152 ntBASIC2.63□□□□□ -1.99
PDZRN3Q9UPQ7 MIR599-201ENST00000385069 95 ntBASIC2.63□□□□□ -1.99
PDZRN3Q9UPQ7 MT-TN-201ENST00000387400 73 ntBASIC2.63□□□□□ -1.99
PDZRN3Q9UPQ7 SNORA48.1-201ENST00000390879 135 ntBASIC2.63□□□□□ -1.99
PDZRN3Q9UPQ7 MIR514B-201ENST00000516774 80 ntBASIC2.63□□□□□ -1.99
PDZRN3Q9UPQ7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PDZRN3Q9UPQ7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
PDZRN3Q9UPQ7 SNORD111.1-201ENST00000516421 86 ntBASIC2.62□□□□□ -1.99
PDZRN3Q9UPQ7 NAMPTP3-201ENST00000569273 224 ntBASIC2.62□□□□□ -1.99
PDZRN3Q9UPQ7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDZRN3Q9UPQ7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.62□□□□□ -1.99
PDZRN3Q9UPQ7 MIR17-201ENST00000385012 84 ntBASIC2.61□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-930P-201ENST00000390938 100 ntBASIC2.61□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-287P-201ENST00000516230 98 ntBASIC2.61□□□□□ -1.99
PDZRN3Q9UPQ7 SNORA31.25-201ENST00000517242 134 ntBASIC2.61□□□□□ -1.99
PDZRN3Q9UPQ7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.61□□□□□ -1.99
PDZRN3Q9UPQ7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.61□□□□□ -1.99
PDZRN3Q9UPQ7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-520P-201ENST00000384717 104 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 MIR548F3-201ENST00000408509 87 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 RNA5SP233-201ENST00000459153 113 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-1053P-201ENST00000515930 101 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-322P-201ENST00000516010 103 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-1089P-201ENST00000516473 104 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 RNU6-656P-201ENST00000516785 107 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 MIR3657-201ENST00000584818 117 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDZRN3Q9UPQ7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.59□□□□□ -1.99
PDZRN3Q9UPQ7 AC025033.1-201ENST00000463883 194 ntBASIC2.59□□□□□ -1.99
PDZRN3Q9UPQ7 AC055731.1-201ENST00000474387 401 ntBASIC2.59□□□□□ -1.99
PDZRN3Q9UPQ7 MIR2115-201ENST00000516657 100 ntBASIC2.59□□□□□ -1.99
PDZRN3Q9UPQ7 MIR6082-201ENST00000613604 109 ntBASIC2.59□□□□□ -1.99
PDZRN3Q9UPQ7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDZRN3Q9UPQ7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PDZRN3Q9UPQ7 RNU6-1123P-201ENST00000362347 106 ntBASIC2.58□□□□□ -2
PDZRN3Q9UPQ7 Y_RNA.13-201ENST00000362403 112 ntBASIC2.58□□□□□ -2
PDZRN3Q9UPQ7 RNU6-302P-201ENST00000365249 107 ntBASIC2.58□□□□□ -2
PDZRN3Q9UPQ7 RNU6-902P-201ENST00000517212 91 ntBASIC2.58□□□□□ -2
PDZRN3Q9UPQ7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PDZRN3Q9UPQ7 Y_RNA.164-201ENST00000363709 102 ntBASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 RNA5SP37-201ENST00000365420 130 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 234.8 ms