Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MIR548O2-201ENST00000616090 70 ntBASIC2.98□□□□□ -1.93
TRIM35Q9UPQ4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM35Q9UPQ4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM35Q9UPQ4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM35Q9UPQ4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
TRIM35Q9UPQ4 SNORD83.1-201ENST00000411362 77 ntBASIC2.97□□□□□ -1.93
TRIM35Q9UPQ4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.97□□□□□ -1.93
TRIM35Q9UPQ4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM35Q9UPQ4 MIR548AG2-201ENST00000581228 64 ntBASIC2.97□□□□□ -1.93
TRIM35Q9UPQ4 AL137847.3-201ENST00000611521 109 ntBASIC2.97□□□□□ -1.93
TRIM35Q9UPQ4 MIR6739-201ENST00000622461 75 ntBASIC2.97□□□□□ -1.93
TRIM35Q9UPQ4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM35Q9UPQ4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
TRIM35Q9UPQ4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
TRIM35Q9UPQ4 RNA5SP181-201ENST00000410246 98 ntBASIC2.96□□□□□ -1.94
TRIM35Q9UPQ4 JTBP1-201ENST00000441314 247 ntBASIC2.96□□□□□ -1.94
TRIM35Q9UPQ4 RNA5SP24-201ENST00000516478 95 ntBASIC2.96□□□□□ -1.94
TRIM35Q9UPQ4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM35Q9UPQ4 RNU6-54P-201ENST00000365563 107 ntBASIC2.95□□□□□ -1.94
TRIM35Q9UPQ4 RNU6-301P-201ENST00000384277 107 ntBASIC2.95□□□□□ -1.94
TRIM35Q9UPQ4 RNA5SP450-201ENST00000411206 102 ntBASIC2.95□□□□□ -1.94
TRIM35Q9UPQ4 AC080100.1-201ENST00000624239 5356 ntBASIC2.95□□□□□ -1.94
TRIM35Q9UPQ4 MIR630-201ENST00000384957 97 ntBASIC2.94□□□□□ -1.94
TRIM35Q9UPQ4 MIR221-201ENST00000385135 110 ntBASIC2.94□□□□□ -1.94
TRIM35Q9UPQ4 Z96811.1-201ENST00000445880 108 ntBASIC2.94□□□□□ -1.94
TRIM35Q9UPQ4 RNU6-980P-201ENST00000516925 103 ntBASIC2.94□□□□□ -1.94
TRIM35Q9UPQ4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM35Q9UPQ4 RN7SKP223-201ENST00000410582 62 ntBASIC2.93□□□□□ -1.94
TRIM35Q9UPQ4 RNA5SP270-201ENST00000411361 118 ntBASIC2.93□□□□□ -1.94
TRIM35Q9UPQ4 AC055731.1-201ENST00000474387 401 ntBASIC2.93□□□□□ -1.94
TRIM35Q9UPQ4 RN7SL429P-201ENST00000479090 223 ntBASIC2.93□□□□□ -1.94
TRIM35Q9UPQ4 RN7SL489P-201ENST00000486185 223 ntBASIC2.93□□□□□ -1.94
TRIM35Q9UPQ4 RN7SL327P-201ENST00000488659 223 ntBASIC2.93□□□□□ -1.94
TRIM35Q9UPQ4 RN7SL853P-201ENST00000617250 223 ntBASIC2.93□□□□□ -1.94
TRIM35Q9UPQ4 RNU6-934P-201ENST00000365154 107 ntBASIC2.92□□□□□ -1.94
TRIM35Q9UPQ4 RNU6-35P-201ENST00000384530 107 ntBASIC2.92□□□□□ -1.94
TRIM35Q9UPQ4 RNA5SP508-201ENST00000411327 119 ntBASIC2.92□□□□□ -1.94
TRIM35Q9UPQ4 AC025033.1-201ENST00000463883 194 ntBASIC2.92□□□□□ -1.94
TRIM35Q9UPQ4 SNORA40.17-201ENST00000517256 115 ntBASIC2.92□□□□□ -1.94
TRIM35Q9UPQ4 MIR3945-201ENST00000581853 98 ntBASIC2.92□□□□□ -1.94
TRIM35Q9UPQ4 MIR4435-1-201ENST00000582552 80 ntBASIC2.92□□□□□ -1.94
TRIM35Q9UPQ4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM35Q9UPQ4 U8.2-201ENST00000363156 134 ntBASIC2.91□□□□□ -1.94
TRIM35Q9UPQ4 RNA5SP147-201ENST00000516493 109 ntBASIC2.91□□□□□ -1.94
TRIM35Q9UPQ4 MIR3124-201ENST00000582636 67 ntBASIC2.91□□□□□ -1.94
TRIM35Q9UPQ4 MIR617-201ENST00000385030 97 ntBASIC2.9□□□□□ -1.95
TRIM35Q9UPQ4 SNORD113-2-201ENST00000391082 72 ntBASIC2.9□□□□□ -1.95
TRIM35Q9UPQ4 SNORD42B-201ENST00000458893 67 ntBASIC2.9□□□□□ -1.95
TRIM35Q9UPQ4 MIR4771-2-201ENST00000577758 74 ntBASIC2.9□□□□□ -1.95
TRIM35Q9UPQ4 MIR4771-1-201ENST00000582617 74 ntBASIC2.9□□□□□ -1.95
TRIM35Q9UPQ4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.9□□□□□ -1.95
TRIM35Q9UPQ4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM35Q9UPQ4 RNU6-930P-201ENST00000390938 100 ntBASIC2.89□□□□□ -1.95
TRIM35Q9UPQ4 AC067940.1-201ENST00000458411 300 ntBASIC2.89□□□□□ -1.95
TRIM35Q9UPQ4 AL359851.1-201ENST00000569460 4997 ntBASIC2.89□□□□□ -1.95
TRIM35Q9UPQ4 RNA5SP403-201ENST00000363598 108 ntBASIC2.88□□□□□ -1.95
TRIM35Q9UPQ4 AL356320.1-201ENST00000429616 163 ntBASIC2.88□□□□□ -1.95
TRIM35Q9UPQ4 SNORA31.11-201ENST00000516528 139 ntBASIC2.88□□□□□ -1.95
TRIM35Q9UPQ4 MIR548C-201ENST00000384815 97 ntBASIC2.87□□□□□ -1.95
TRIM35Q9UPQ4 AL157398.1-201ENST00000452981 186 ntBASIC2.87□□□□□ -1.95
TRIM35Q9UPQ4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.87□□□□□ -1.95
TRIM35Q9UPQ4 MIR1273D-201ENST00000577266 86 ntBASIC2.87□□□□□ -1.95
TRIM35Q9UPQ4 MIR5002-201ENST00000584713 97 ntBASIC2.87□□□□□ -1.95
TRIM35Q9UPQ4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM35Q9UPQ4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM35Q9UPQ4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
TRIM35Q9UPQ4 RNU7-119P-201ENST00000459279 63 ntBASIC2.86□□□□□ -1.95
TRIM35Q9UPQ4 RNA5SP200-201ENST00000516360 103 ntBASIC2.86□□□□□ -1.95
TRIM35Q9UPQ4 RNA5SP402-201ENST00000517148 110 ntBASIC2.86□□□□□ -1.95
TRIM35Q9UPQ4 MIR4658-201ENST00000584344 65 ntBASIC2.86□□□□□ -1.95
TRIM35Q9UPQ4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM35Q9UPQ4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM35Q9UPQ4 RNU6-990P-201ENST00000364385 104 ntBASIC2.85□□□□□ -1.95
TRIM35Q9UPQ4 SNORD113.3-201ENST00000364630 78 ntBASIC2.85□□□□□ -1.95
TRIM35Q9UPQ4 RNU6-364P-201ENST00000384387 107 ntBASIC2.85□□□□□ -1.95
TRIM35Q9UPQ4 SNORA64-201ENST00000384674 134 ntBASIC2.85□□□□□ -1.95
TRIM35Q9UPQ4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 RNU6-698P-201ENST00000363523 107 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 RNU6-34P-201ENST00000364874 107 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 Y_RNA.330-201ENST00000365230 109 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 RNU6V-201ENST00000384105 107 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 SNORA67.3-201ENST00000384366 140 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 RNU6-1162P-201ENST00000384443 104 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 MIR519E-201ENST00000385075 84 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 RNA5SP425-201ENST00000410336 112 ntBASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM35Q9UPQ4 Y_RNA.250-201ENST00000364542 110 ntBASIC2.83□□□□□ -1.96
TRIM35Q9UPQ4 MIR517B-201ENST00000385102 67 ntBASIC2.83□□□□□ -1.96
TRIM35Q9UPQ4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
TRIM35Q9UPQ4 SNORD115-24-201ENST00000363528 82 ntBASIC2.82□□□□□ -1.96
TRIM35Q9UPQ4 AC104435.1-201ENST00000483483 166 ntBASIC2.82□□□□□ -1.96
TRIM35Q9UPQ4 AC018659.1-201ENST00000551083 169 ntBASIC2.82□□□□□ -1.96
TRIM35Q9UPQ4 MIR4529-201ENST00000578110 78 ntBASIC2.82□□□□□ -1.96
TRIM35Q9UPQ4 MIR4676-201ENST00000583078 72 ntBASIC2.82□□□□□ -1.96
TRIM35Q9UPQ4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM35Q9UPQ4 RNU4-33P-201ENST00000364316 85 ntBASIC2.81□□□□□ -1.96
TRIM35Q9UPQ4 RNU6-439P-201ENST00000384188 106 ntBASIC2.81□□□□□ -1.96
TRIM35Q9UPQ4 SNORA70B-201ENST00000384210 135 ntBASIC2.81□□□□□ -1.96
TRIM35Q9UPQ4 MIR521-2-201ENST00000384818 87 ntBASIC2.81□□□□□ -1.96
TRIM35Q9UPQ4 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 208.1 ms