Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 Y_RNA.371-201ENST00000365591 113 ntBASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 SNORA80D-201ENST00000384488 135 ntBASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 MIR154-201ENST00000385243 84 ntBASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 AC097510.1-201ENST00000510945 133 ntBASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 RNU6-1265P-201ENST00000516342 103 ntBASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 AC027335.2-201ENST00000624030 375 ntBASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 ZNF355P-201ENST00000427301 3216 ntBASIC2.17□□□□□ -2.06
PCDHGC3Q9UN70 RNU6-291P-201ENST00000384720 107 ntBASIC2.17□□□□□ -2.06
PCDHGC3Q9UN70 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
PCDHGC3Q9UN70 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.17□□□□□ -2.06
PCDHGC3Q9UN70 AC008834.1-201ENST00000511612 175 ntBASIC2.17□□□□□ -2.06
PCDHGC3Q9UN70 AC008608.1-201ENST00000603910 127 ntBASIC2.17□□□□□ -2.06
PCDHGC3Q9UN70 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
PCDHGC3Q9UN70 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHGC3Q9UN70 RNA5SP160-201ENST00000364866 120 ntBASIC2.16□□□□□ -2.06
PCDHGC3Q9UN70 RNU6-301P-201ENST00000384277 107 ntBASIC2.16□□□□□ -2.06
PCDHGC3Q9UN70 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PCDHGC3Q9UN70 RNU7-40P-201ENST00000516397 64 ntBASIC2.16□□□□□ -2.06
PCDHGC3Q9UN70 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.16□□□□□ -2.06
PCDHGC3Q9UN70 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHGC3Q9UN70 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHGC3Q9UN70 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PCDHGC3Q9UN70 SNORD115-44-201ENST00000365391 82 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU6-154P-201ENST00000384306 106 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU6-1241P-201ENST00000384536 107 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 U3.27-201ENST00000391237 200 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU6-994P-201ENST00000410507 111 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 AL356379.1-201ENST00000414105 126 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 AC244505.6-201ENST00000452829 130 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU7-90P-201ENST00000459216 62 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU7-21P-201ENST00000459430 62 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RPL23AP42-201ENST00000471152 471 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHGC3Q9UN70 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PCDHGC3Q9UN70 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PCDHGC3Q9UN70 RPL23AP94-201ENST00000512518 302 ntBASIC2.14□□□□□ -2.07
PCDHGC3Q9UN70 AC023827.1-201ENST00000569247 97 ntBASIC2.14□□□□□ -2.07
PCDHGC3Q9UN70 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.14□□□□□ -2.07
PCDHGC3Q9UN70 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 SNORA24B-201ENST00000384176 131 ntBASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 MIR451A-201ENST00000385059 72 ntBASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 SNORD30.1-201ENST00000391309 70 ntBASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 MIR3140-201ENST00000583685 90 ntBASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 AL096840.1-201ENST00000603287 93 ntBASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 AL359821.1-201ENST00000605519 182 ntBASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 MIR664A-201ENST00000626086 82 ntBASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
PCDHGC3Q9UN70 Y_RNA.340-201ENST00000365330 92 ntBASIC2.12□□□□□ -2.07
PCDHGC3Q9UN70 SNORA11.2-201ENST00000408318 127 ntBASIC2.12□□□□□ -2.07
PCDHGC3Q9UN70 RNU7-102P-201ENST00000458948 62 ntBASIC2.12□□□□□ -2.07
PCDHGC3Q9UN70 RNU6-977P-201ENST00000516411 103 ntBASIC2.12□□□□□ -2.07
PCDHGC3Q9UN70 RNU6-902P-201ENST00000517212 91 ntBASIC2.12□□□□□ -2.07
PCDHGC3Q9UN70 MIR3675-201ENST00000583661 73 ntBASIC2.12□□□□□ -2.07
PCDHGC3Q9UN70 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
PCDHGC3Q9UN70 RNU1-119P-201ENST00000391122 165 ntBASIC2.11□□□□□ -2.07
PCDHGC3Q9UN70 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHGC3Q9UN70 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.11□□□□□ -2.07
PCDHGC3Q9UN70 MIR4648-201ENST00000580107 72 ntBASIC2.11□□□□□ -2.07
PCDHGC3Q9UN70 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.11□□□□□ -2.07
PCDHGC3Q9UN70 ZNF209P-201ENST00000593450 2304 ntBASIC2.11□□□□□ -2.07
PCDHGC3Q9UN70 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
PCDHGC3Q9UN70 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
PCDHGC3Q9UN70 RNU1-41P-201ENST00000516161 162 ntBASIC2.1□□□□□ -2.07
PCDHGC3Q9UN70 RNU1-48P-201ENST00000516400 162 ntBASIC2.1□□□□□ -2.07
PCDHGC3Q9UN70 MIR4804-201ENST00000581683 73 ntBASIC2.1□□□□□ -2.07
PCDHGC3Q9UN70 U6.81-201ENST00000612550 106 ntBASIC2.1□□□□□ -2.07
PCDHGC3Q9UN70 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.1□□□□□ -2.07
PCDHGC3Q9UN70 MIR1-1-201ENST00000362147 71 ntBASIC2.09□□□□□ -2.07
PCDHGC3Q9UN70 Y_RNA.174-201ENST00000363781 105 ntBASIC2.09□□□□□ -2.07
PCDHGC3Q9UN70 Y_RNA.363-201ENST00000365529 113 ntBASIC2.09□□□□□ -2.07
PCDHGC3Q9UN70 RNU6-540P-201ENST00000384622 101 ntBASIC2.09□□□□□ -2.07
PCDHGC3Q9UN70 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PCDHGC3Q9UN70 RNA5SP245-201ENST00000364239 121 ntBASIC2.08□□□□□ -2.08
PCDHGC3Q9UN70 MIR100-201ENST00000385259 80 ntBASIC2.08□□□□□ -2.08
PCDHGC3Q9UN70 MIR216B-201ENST00000390186 82 ntBASIC2.08□□□□□ -2.08
PCDHGC3Q9UN70 RNU6-910P-201ENST00000390844 107 ntBASIC2.08□□□□□ -2.08
PCDHGC3Q9UN70 MIR934-201ENST00000401241 83 ntBASIC2.08□□□□□ -2.08
PCDHGC3Q9UN70 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
PCDHGC3Q9UN70 AC067940.1-201ENST00000458411 300 ntBASIC2.08□□□□□ -2.08
PCDHGC3Q9UN70 RNU6-330P-201ENST00000363015 107 ntBASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 SNORA70B-201ENST00000384210 135 ntBASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 RNU7-56P-201ENST00000458744 62 ntBASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 MIR8053-201ENST00000613344 75 ntBASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 U6.111-201ENST00000636093 83 ntBASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PCDHGC3Q9UN70 RNU6-663P-201ENST00000391105 106 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms