Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNA5SP501-201ENST00000410990 112 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 AC027119.1-201ENST00000440877 241 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 snoU13.16-201ENST00000459350 104 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 SNORD123-201ENST00000459473 70 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 SNORD92-201ENST00000585078 85 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 RNU6-369P-201ENST00000362515 102 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 RNU6-112P-201ENST00000363599 104 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 Y_RNA.207-201ENST00000364142 106 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 RNU6-1184P-201ENST00000384588 108 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 AC092634.7-201ENST00000621022 103 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 Z97988.1-201ENST00000637697 135 ntBASIC2.39□□□□□ -2.03
COL17A1Q9UMD9 Y_RNA.42-201ENST00000362660 108 ntBASIC2.38□□□□□ -2.03
COL17A1Q9UMD9 RNU6-446P-201ENST00000362827 106 ntBASIC2.38□□□□□ -2.03
COL17A1Q9UMD9 MIR660-201ENST00000385235 97 ntBASIC2.38□□□□□ -2.03
COL17A1Q9UMD9 MIR151B-201ENST00000584249 96 ntBASIC2.38□□□□□ -2.03
COL17A1Q9UMD9 MIR8053-201ENST00000613344 75 ntBASIC2.38□□□□□ -2.03
COL17A1Q9UMD9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.38□□□□□ -2.03
COL17A1Q9UMD9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.38□□□□□ -2.03
COL17A1Q9UMD9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 RNA5SP117-201ENST00000365294 118 ntBASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 RNU6-1051P-201ENST00000365471 102 ntBASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 Y_RNA.537-201ENST00000384626 109 ntBASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 SNORA67.6-201ENST00000391093 99 ntBASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 AC138749.4-201ENST00000563970 127 ntBASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 AC021506.2-201ENST00000612354 169 ntBASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 MIR6788-201ENST00000618842 66 ntBASIC2.37□□□□□ -2.03
COL17A1Q9UMD9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 RNU6-957P-201ENST00000363652 99 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 RNU6-1187P-201ENST00000364771 110 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 RNU6-571P-201ENST00000384128 107 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 RNU6-243P-201ENST00000391140 107 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 RNU6-1254P-201ENST00000391266 104 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 RNA5SP437-201ENST00000517249 129 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 AC141846.1-201ENST00000568348 142 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 AL357312.1-201ENST00000603879 298 ntBASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL17A1Q9UMD9 MIR424-201ENST00000362227 98 ntBASIC2.34□□□□□ -2.03
COL17A1Q9UMD9 SNORD113-4-201ENST00000364802 75 ntBASIC2.34□□□□□ -2.03
COL17A1Q9UMD9 RNU6-604P-201ENST00000390917 100 ntBASIC2.34□□□□□ -2.03
COL17A1Q9UMD9 RNU6-360P-201ENST00000390944 104 ntBASIC2.34□□□□□ -2.03
COL17A1Q9UMD9 RNU6-466P-201ENST00000391224 103 ntBASIC2.34□□□□□ -2.03
COL17A1Q9UMD9 RNU6-1057P-201ENST00000517162 102 ntBASIC2.34□□□□□ -2.03
COL17A1Q9UMD9 MIR466-201ENST00000580653 84 ntBASIC2.34□□□□□ -2.03
COL17A1Q9UMD9 MIR548J-201ENST00000408833 112 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 RNA5SP237-201ENST00000410414 113 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 RNU7-106P-201ENST00000459514 67 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 CYP3A52P-201ENST00000563326 91 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 MIR3140-201ENST00000583685 90 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 U6.109-201ENST00000636749 87 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 Y_RNA.119-201ENST00000363301 96 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 MIR526A1-201ENST00000384897 85 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 RNU1-92P-201ENST00000517017 135 ntBASIC2.33□□□□□ -2.04
COL17A1Q9UMD9 Y_RNA.606-201ENST00000410579 103 ntBASIC2.32□□□□□ -2.04
COL17A1Q9UMD9 SNORA31.24-201ENST00000517232 57 ntBASIC2.32□□□□□ -2.04
COL17A1Q9UMD9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL17A1Q9UMD9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.31□□□□□ -2.04
COL17A1Q9UMD9 SNORD114-27-201ENST00000363766 70 ntBASIC2.31□□□□□ -2.04
COL17A1Q9UMD9 RNU6-949P-201ENST00000384040 107 ntBASIC2.31□□□□□ -2.04
COL17A1Q9UMD9 RNU4-88P-201ENST00000411220 86 ntBASIC2.31□□□□□ -2.04
COL17A1Q9UMD9 RNA5SP364-201ENST00000516938 78 ntBASIC2.31□□□□□ -2.04
COL17A1Q9UMD9 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
COL17A1Q9UMD9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
COL17A1Q9UMD9 RNA5SP192-201ENST00000364404 120 ntBASIC2.3□□□□□ -2.04
COL17A1Q9UMD9 RNU1-52P-201ENST00000384190 164 ntBASIC2.3□□□□□ -2.04
COL17A1Q9UMD9 MIR517C-201ENST00000385103 95 ntBASIC2.3□□□□□ -2.04
COL17A1Q9UMD9 AL662814.1-201ENST00000617364 121 ntBASIC2.3□□□□□ -2.04
COL17A1Q9UMD9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.3□□□□□ -2.04
COL17A1Q9UMD9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
COL17A1Q9UMD9 HMGN2P19-201ENST00000425149 265 ntBASIC2.29□□□□□ -2.04
COL17A1Q9UMD9 RNU6-322P-201ENST00000516010 103 ntBASIC2.29□□□□□ -2.04
COL17A1Q9UMD9 SNORA74.3-201ENST00000517108 154 ntBASIC2.29□□□□□ -2.04
COL17A1Q9UMD9 SNORA31.25-201ENST00000517242 134 ntBASIC2.29□□□□□ -2.04
COL17A1Q9UMD9 MIR548AO-201ENST00000579992 96 ntBASIC2.29□□□□□ -2.04
COL17A1Q9UMD9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.29□□□□□ -2.04
COL17A1Q9UMD9 RNU6-824P-201ENST00000363724 104 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 RNU4-52P-201ENST00000384209 138 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 SNORD38B-201ENST00000384690 67 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 RNA5SP450-201ENST00000411206 102 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 RNU6-982P-201ENST00000516216 102 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 RNU2-19P-201ENST00000517288 84 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 SNORD38B-202ENST00000625943 69 ntBASIC2.28□□□□□ -2.04
COL17A1Q9UMD9 RNY4P3-201ENST00000365254 95 ntBASIC2.27□□□□□ -2.05
COL17A1Q9UMD9 RNA5SP100-201ENST00000410903 110 ntBASIC2.27□□□□□ -2.05
COL17A1Q9UMD9 RNA5SP59-201ENST00000410922 110 ntBASIC2.27□□□□□ -2.05
COL17A1Q9UMD9 RNU7-43P-201ENST00000516554 64 ntBASIC2.27□□□□□ -2.05
COL17A1Q9UMD9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.27□□□□□ -2.05
COL17A1Q9UMD9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.27□□□□□ -2.05
COL17A1Q9UMD9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.27□□□□□ -2.05
COL17A1Q9UMD9 MAPK10-266ENST00000641066 6555 ntBASIC2.27□□□□□ -2.05
COL17A1Q9UMD9 SNORA25.5-201ENST00000363782 126 ntBASIC2.26□□□□□ -2.05
COL17A1Q9UMD9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms