Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.44□□□□□ -2.64
CHD8Q9HCK8 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.44□□□□□ -2.64
CHD8Q9HCK8 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.44□□□□□ -2.64
CHD8Q9HCK8 MIR548A1-201ENST00000385041 97 ntBASIC-1.44□□□□□ -2.64
CHD8Q9HCK8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.44□□□□□ -2.64
CHD8Q9HCK8 AC009779.6-201ENST00000603972 165 ntBASIC-1.44□□□□□ -2.64
CHD8Q9HCK8 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 RNU1-115P-201ENST00000365329 160 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 RNU6-800P-201ENST00000384473 103 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 MIR548AB-201ENST00000584917 84 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 AC005520.4-201ENST00000604337 90 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 SNORA40.3-201ENST00000390964 122 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 MIR2053-201ENST00000459295 91 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 RNU2-35P-201ENST00000516446 142 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 U7.5-201ENST00000517224 61 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 MIR3913-1-201ENST00000577744 102 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 AP000240.1-201ENST00000609910 452 ntBASIC-1.45□□□□□ -2.64
CHD8Q9HCK8 RNU6-845P-201ENST00000362578 103 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 SNORD113-3-201ENST00000364830 72 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNU6-282P-201ENST00000365357 103 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNU6-383P-201ENST00000410864 94 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 AC024067.1-201ENST00000426199 223 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNU7-63P-201ENST00000459054 62 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNU6-408P-201ENST00000515910 100 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNA5SP153-201ENST00000516498 76 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNY3P3-201ENST00000363816 102 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNU4-68P-201ENST00000364314 141 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNU7-106P-201ENST00000459514 67 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 AP003461.1-201ENST00000528866 78 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 MTND3P12-201ENST00000559068 328 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 TPTEP1-208ENST00000636884 213 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 U6.97-201ENST00000636904 101 ntBASIC-1.46□□□□□ -2.64
CHD8Q9HCK8 RNU6-495P-201ENST00000362995 107 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 RNU6-912P-201ENST00000363800 104 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 RNU6-308P-201ENST00000390957 107 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 RNU7-2P-201ENST00000516096 62 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 MRPS36P3-201ENST00000519284 130 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 AL731768.1-201ENST00000603124 139 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 AP000720.1-201ENST00000625091 483 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 RNU6-682P-201ENST00000363843 106 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 RNU6-879P-201ENST00000364328 108 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 RNU7-24P-201ENST00000458867 62 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 RNU6-911P-201ENST00000516523 104 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 MIR4696-201ENST00000581431 70 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 MIR548O2-201ENST00000616090 70 ntBASIC-1.47□□□□□ -2.64
CHD8Q9HCK8 RNU6-818P-201ENST00000364837 108 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 RNU6-132P-201ENST00000383863 107 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 RNU6-144P-201ENST00000383951 107 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 RNU6-38P-201ENST00000384085 107 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 RNU6-864P-201ENST00000516256 108 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 MIR376B-201ENST00000614515 100 ntBASIC-1.48□□□□□ -2.65
CHD8Q9HCK8 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 RNU6-728P-201ENST00000365375 104 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 AL033528.1-201ENST00000453780 140 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 RNU6-261P-201ENST00000459506 102 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 RNU6-990P-201ENST00000364385 104 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 SNORA33.1-201ENST00000364957 130 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 SNORD63-201ENST00000384262 68 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 RNU6-636P-201ENST00000384598 107 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 RNU6-648P-201ENST00000410190 107 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 MTCO2P19-201ENST00000427513 598 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 CYP3A54P-201ENST00000566950 75 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 MIR4659A-201ENST00000580269 81 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 AP001362.1-201ENST00000625165 124 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 MIR6863-201ENST00000636112 90 ntBASIC-1.49□□□□□ -2.65
CHD8Q9HCK8 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 MIR628-201ENST00000385229 95 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 RNU6-696P-201ENST00000390834 107 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 SNORD18C-201ENST00000362704 69 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 MTND3P16-201ENST00000452205 344 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 MTND2P39-201ENST00000457230 764 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 SNORD42B-201ENST00000458893 67 ntBASIC-1.5□□□□□ -2.65
CHD8Q9HCK8 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 326.2 ms