Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AL670379.3-201ENST00000605040 251 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 MIR2909-201ENST00000617113 69 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 AL512310.12-203ENST00000640543 90 ntBASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
RTP3Q9BQQ7 SNORA63.5-201ENST00000363548 123 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 RNU6-409P-201ENST00000384114 104 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.563-201ENST00000384707 108 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 MIR140-201ENST00000385282 100 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 RNU4-61P-201ENST00000411243 107 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 BX276092.1-201ENST00000427368 251 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 RPL39P34-201ENST00000477141 156 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 MIR4679-2-201ENST00000578358 77 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 AL035470.1-201ENST00000622571 220 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 AL162726.3-218ENST00000636401 95 ntBASIC0.55□□□□□ -2.32
RTP3Q9BQQ7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.56-201ENST00000362798 112 ntBASIC0.54□□□□□ -2.32
RTP3Q9BQQ7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.54□□□□□ -2.32
RTP3Q9BQQ7 RNU6-1168P-201ENST00000390831 104 ntBASIC0.54□□□□□ -2.32
RTP3Q9BQQ7 AL606753.1-201ENST00000427435 87 ntBASIC0.54□□□□□ -2.32
RTP3Q9BQQ7 RNU6-789P-201ENST00000517105 102 ntBASIC0.54□□□□□ -2.32
RTP3Q9BQQ7 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
RTP3Q9BQQ7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
RTP3Q9BQQ7 AL353813.1-201ENST00000440700 253 ntBASIC0.53□□□□□ -2.32
RTP3Q9BQQ7 RNU6-469P-201ENST00000516253 101 ntBASIC0.53□□□□□ -2.32
RTP3Q9BQQ7 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
RTP3Q9BQQ7 RNU6-1154P-201ENST00000391001 104 ntBASIC0.52□□□□□ -2.33
RTP3Q9BQQ7 RNA5SP63-201ENST00000391225 112 ntBASIC0.52□□□□□ -2.33
RTP3Q9BQQ7 MIR1912-201ENST00000410389 80 ntBASIC0.52□□□□□ -2.33
RTP3Q9BQQ7 MIR548H5-201ENST00000580314 60 ntBASIC0.52□□□□□ -2.33
RTP3Q9BQQ7 RNU6-1313P-201ENST00000362622 102 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 RNA5SP205-201ENST00000364653 136 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 Y_RNA.309-201ENST00000365046 111 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 SNORD116-21-201ENST00000384507 92 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 MIR635-201ENST00000384830 98 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 RNU6-1018P-201ENST00000516577 106 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 RNA5SP285-201ENST00000516619 119 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 RNA5SP94-201ENST00000516917 108 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 AC068339.1-201ENST00000526965 141 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 MTND5P40-201ENST00000559945 246 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.51□□□□□ -2.33
RTP3Q9BQQ7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 Y_RNA.247-201ENST00000364500 92 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 SNORD113-1-201ENST00000365321 69 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 SNORD38.2-201ENST00000384470 69 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 TRAJ51-201ENST00000504127 63 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 RNU6-313P-201ENST00000516317 112 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 RNU6-479P-201ENST00000516348 105 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 RNU6-1006P-201ENST00000516998 103 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 RNU7-10P-201ENST00000607194 63 ntBASIC0.5□□□□□ -2.33
RTP3Q9BQQ7 Y_RNA.35-201ENST00000362601 101 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 U8.6-201ENST00000364939 135 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 MIR548I2-201ENST00000408348 149 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 SPINT5P-201ENST00000448174 155 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 RNU6-406P-201ENST00000516470 107 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 AC138869.1-201ENST00000568623 124 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 MIR4514-201ENST00000581410 57 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 AC023932.2-201ENST00000603176 175 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 AC092634.7-201ENST00000621022 103 ntBASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
RTP3Q9BQQ7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 SNORD38.1-201ENST00000363863 68 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 RNA5SP517-201ENST00000364724 117 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 RNU6-1201P-201ENST00000384227 107 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 RNU6-1144P-201ENST00000384247 104 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 RNU6-880P-201ENST00000384526 107 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 RNU6-1064P-201ENST00000410626 104 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 RNU6-135P-201ENST00000516769 101 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 RNU6-850P-201ENST00000516934 103 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 MIR5009-201ENST00000578736 100 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 AL442128.1-201ENST00000615151 90 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
RTP3Q9BQQ7 SNORA36.1-201ENST00000363424 132 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 Y_RNA.281-201ENST00000364774 94 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 RNU6-571P-201ENST00000384128 107 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 SNORD28-201ENST00000384706 75 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 RNU6-476P-201ENST00000384726 107 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 SNORA19-201ENST00000384737 128 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 RNU2-51P-201ENST00000410708 197 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 SNRPGP12-201ENST00000449481 213 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 RNU6-90P-201ENST00000606352 106 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.47□□□□□ -2.33
RTP3Q9BQQ7 RNU6-170P-201ENST00000362832 104 ntBASIC0.46□□□□□ -2.34
RTP3Q9BQQ7 SNORD115-24-201ENST00000363528 82 ntBASIC0.46□□□□□ -2.34
RTP3Q9BQQ7 MIR577-201ENST00000385196 96 ntBASIC0.46□□□□□ -2.34
RTP3Q9BQQ7 MIR548G-201ENST00000408442 89 ntBASIC0.46□□□□□ -2.34
RTP3Q9BQQ7 SNORD63B-201ENST00000411005 70 ntBASIC0.46□□□□□ -2.34
RTP3Q9BQQ7 AC244505.6-201ENST00000452829 130 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms