Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.23□□□□□ -2.05
TRERF1Q96PN7 RNU6-250P-201ENST00000516958 103 ntBASIC2.23□□□□□ -2.05
TRERF1Q96PN7 MIR3675-201ENST00000583661 73 ntBASIC2.23□□□□□ -2.05
TRERF1Q96PN7 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.23□□□□□ -2.05
TRERF1Q96PN7 MIR377-201ENST00000362145 69 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 MIR101-2-201ENST00000362195 79 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 RNU6-1260P-201ENST00000362944 107 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 MIR519A1-201ENST00000385257 85 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 RNU6-141P-201ENST00000410499 105 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 Y_RNA.606-201ENST00000410579 103 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 RNU6-1052P-201ENST00000411398 104 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 RPS27P16-201ENST00000425758 201 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 AC025033.1-201ENST00000463883 194 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 RNU6-719P-201ENST00000516671 104 ntBASIC2.22□□□□□ -2.05
TRERF1Q96PN7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TRERF1Q96PN7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
TRERF1Q96PN7 Y_RNA.13-201ENST00000362403 112 ntBASIC2.21□□□□□ -2.06
TRERF1Q96PN7 Y_RNA.443-201ENST00000384135 111 ntBASIC2.21□□□□□ -2.06
TRERF1Q96PN7 SNORA24B-201ENST00000384176 131 ntBASIC2.21□□□□□ -2.06
TRERF1Q96PN7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TRERF1Q96PN7 AC012493.3-201ENST00000604494 112 ntBASIC2.21□□□□□ -2.06
TRERF1Q96PN7 GHRLOS.1-201ENST00000610995 70 ntBASIC2.21□□□□□ -2.06
TRERF1Q96PN7 MIR8063-201ENST00000621930 81 ntBASIC2.21□□□□□ -2.06
TRERF1Q96PN7 AL359851.1-201ENST00000569460 4997 ntBASIC2.21□□□□□ -2.06
TRERF1Q96PN7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TRERF1Q96PN7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TRERF1Q96PN7 AC023934.1-201ENST00000574529 2389 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 MIR103A2-201ENST00000362154 78 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 SNORD115-22-201ENST00000364456 82 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 RNU6-580P-201ENST00000365159 107 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 RNU6-895P-201ENST00000384125 103 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 Y_RNA.697-201ENST00000516776 113 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 RNU6-881P-201ENST00000516813 102 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 AC015688.6-201ENST00000577737 104 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 SNORA77B-201ENST00000578179 125 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 MIR548H5-201ENST00000580314 60 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 U6.81-201ENST00000612550 106 ntBASIC2.2□□□□□ -2.06
TRERF1Q96PN7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRERF1Q96PN7 SNORD45.1-201ENST00000363181 77 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 RNY4P3-201ENST00000365254 95 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 SNORD116-24-201ENST00000384549 92 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 RNA5SP212-201ENST00000391223 107 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 AC003989.2-201ENST00000440224 169 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 MIR18B-201ENST00000454574 71 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 AC019176.1-201ENST00000518519 225 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 MTRNR2L2-201ENST00000604882 87 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TRERF1Q96PN7 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 MIR6082-201ENST00000613604 109 ntBASIC2.19□□□□□ -2.06
TRERF1Q96PN7 RNA5SP264-201ENST00000363115 107 ntBASIC2.18□□□□□ -2.06
TRERF1Q96PN7 SNORA25.4-201ENST00000363666 124 ntBASIC2.18□□□□□ -2.06
TRERF1Q96PN7 RNU6-681P-201ENST00000364012 104 ntBASIC2.18□□□□□ -2.06
TRERF1Q96PN7 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
TRERF1Q96PN7 RNU7-185P-201ENST00000459215 60 ntBASIC2.18□□□□□ -2.06
TRERF1Q96PN7 AL133373.1-201ENST00000497098 94 ntBASIC2.18□□□□□ -2.06
TRERF1Q96PN7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.18□□□□□ -2.06
TRERF1Q96PN7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
TRERF1Q96PN7 Y_RNA.56-201ENST00000362798 112 ntBASIC2.17□□□□□ -2.06
TRERF1Q96PN7 RNU1-17P-201ENST00000363022 152 ntBASIC2.17□□□□□ -2.06
TRERF1Q96PN7 SUMO2P12-201ENST00000405924 140 ntBASIC2.17□□□□□ -2.06
TRERF1Q96PN7 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
TRERF1Q96PN7 AC097510.1-201ENST00000510945 133 ntBASIC2.17□□□□□ -2.06
TRERF1Q96PN7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRERF1Q96PN7 SNORD83.1-201ENST00000411362 77 ntBASIC2.16□□□□□ -2.06
TRERF1Q96PN7 AL603825.1-201ENST00000438481 80 ntBASIC2.16□□□□□ -2.06
TRERF1Q96PN7 MIR4713-201ENST00000582691 75 ntBASIC2.16□□□□□ -2.06
TRERF1Q96PN7 RNU7-10P-201ENST00000607194 63 ntBASIC2.16□□□□□ -2.06
TRERF1Q96PN7 AC103810.8-201ENST00000607347 118 ntBASIC2.16□□□□□ -2.06
TRERF1Q96PN7 AL109933.3-201ENST00000619095 188 ntBASIC2.16□□□□□ -2.06
TRERF1Q96PN7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRERF1Q96PN7 MIR451A-201ENST00000385059 72 ntBASIC2.15□□□□□ -2.07
TRERF1Q96PN7 RNU6-604P-201ENST00000390917 100 ntBASIC2.15□□□□□ -2.07
TRERF1Q96PN7 MIR599-201ENST00000385069 95 ntBASIC2.14□□□□□ -2.07
TRERF1Q96PN7 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
TRERF1Q96PN7 RNU6-935P-201ENST00000410371 100 ntBASIC2.14□□□□□ -2.07
TRERF1Q96PN7 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
TRERF1Q96PN7 AC097635.1-201ENST00000450678 155 ntBASIC2.14□□□□□ -2.07
TRERF1Q96PN7 SNORD113.1-201ENST00000363280 73 ntBASIC2.13□□□□□ -2.07
TRERF1Q96PN7 Y_RNA.258-201ENST00000364613 105 ntBASIC2.13□□□□□ -2.07
TRERF1Q96PN7 MIR9-3-201ENST00000385084 90 ntBASIC2.13□□□□□ -2.07
TRERF1Q96PN7 MIR1257-201ENST00000408490 117 ntBASIC2.13□□□□□ -2.07
TRERF1Q96PN7 RNU6-1265P-201ENST00000516342 103 ntBASIC2.13□□□□□ -2.07
TRERF1Q96PN7 MIR8074-201ENST00000615081 81 ntBASIC2.13□□□□□ -2.07
TRERF1Q96PN7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.13□□□□□ -2.07
TRERF1Q96PN7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRERF1Q96PN7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRERF1Q96PN7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRERF1Q96PN7 RNA5SP245-201ENST00000364239 121 ntBASIC2.12□□□□□ -2.07
TRERF1Q96PN7 RNU6-614P-201ENST00000384369 107 ntBASIC2.12□□□□□ -2.07
TRERF1Q96PN7 MIR633-201ENST00000384821 98 ntBASIC2.12□□□□□ -2.07
TRERF1Q96PN7 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
TRERF1Q96PN7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.12□□□□□ -2.07
TRERF1Q96PN7 MIR8053-201ENST00000613344 75 ntBASIC2.12□□□□□ -2.07
TRERF1Q96PN7 U6.59-201ENST00000615686 107 ntBASIC2.12□□□□□ -2.07
TRERF1Q96PN7 RNU6-1216P-201ENST00000362590 107 ntBASIC2.11□□□□□ -2.07
TRERF1Q96PN7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.11□□□□□ -2.07
TRERF1Q96PN7 RNA5SP458-201ENST00000516188 119 ntBASIC2.11□□□□□ -2.07
TRERF1Q96PN7 MIR4511-201ENST00000582784 87 ntBASIC2.11□□□□□ -2.07
TRERF1Q96PN7 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
TRERF1Q96PN7 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms