Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 MTATP8P2-201ENST00000435212 202 ntBASIC0.89□□□□□ -2.27
RTP4Q96DX8 SPINT5P-201ENST00000448174 155 ntBASIC0.89□□□□□ -2.27
RTP4Q96DX8 SNORA40.13-201ENST00000516379 120 ntBASIC0.89□□□□□ -2.27
RTP4Q96DX8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.89□□□□□ -2.27
RTP4Q96DX8 RNU6-86P-201ENST00000606534 107 ntBASIC0.89□□□□□ -2.27
RTP4Q96DX8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.89□□□□□ -2.27
RTP4Q96DX8 Y_RNA.173-201ENST00000363776 113 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 RNU6-364P-201ENST00000384387 107 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 MIR942-201ENST00000401111 86 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.88□□□□□ -2.27
RTP4Q96DX8 SNRPGP12-201ENST00000449481 213 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 RNU7-61P-201ENST00000515897 61 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 MTND5P40-201ENST00000559945 246 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 MIR4439-201ENST00000583746 80 ntBASIC0.88□□□□□ -2.27
RTP4Q96DX8 RNU4-58P-201ENST00000363192 141 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 MIR488-201ENST00000365739 83 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 MIR598-201ENST00000384868 97 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.87□□□□□ -2.27
RTP4Q96DX8 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 Y_RNA.694-201ENST00000516677 117 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 RNU6-850P-201ENST00000516934 103 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 CYP3A137P-201ENST00000562436 69 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 RNU6-90P-201ENST00000606352 106 ntBASIC0.87□□□□□ -2.27
RTP4Q96DX8 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 RNA5SP245-201ENST00000364239 121 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 SNORD100-201ENST00000408573 76 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 AC067940.1-201ENST00000458411 300 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 RNA5SP480-201ENST00000516840 109 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 MIR2052-201ENST00000636055 55 ntBASIC0.86□□□□□ -2.27
RTP4Q96DX8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
RTP4Q96DX8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
RTP4Q96DX8 RNU6-1244P-201ENST00000363614 108 ntBASIC0.85□□□□□ -2.27
RTP4Q96DX8 RNU6-571P-201ENST00000384128 107 ntBASIC0.85□□□□□ -2.27
RTP4Q96DX8 RNU6-291P-201ENST00000384720 107 ntBASIC0.85□□□□□ -2.27
RTP4Q96DX8 MIR520H-201ENST00000385126 88 ntBASIC0.85□□□□□ -2.27
RTP4Q96DX8 RNU1-119P-201ENST00000391122 165 ntBASIC0.85□□□□□ -2.27
RTP4Q96DX8 RNU6-162P-201ENST00000516228 103 ntBASIC0.85□□□□□ -2.27
RTP4Q96DX8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
RTP4Q96DX8 RNU6-765P-201ENST00000516916 99 ntBASIC0.85□□□□□ -2.27
RTP4Q96DX8 Y_RNA.342-201ENST00000365352 113 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 MIR7-2-201ENST00000384970 110 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
RTP4Q96DX8 U7.7-201ENST00000459276 60 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 RNU7-106P-201ENST00000459514 67 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 TRAJ51-201ENST00000504127 63 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 RNA5SP436-201ENST00000516020 115 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 RNU6-448P-201ENST00000517052 107 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 RNA5SP170-201ENST00000517150 101 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 AC103810.7-201ENST00000607821 91 ntBASIC0.84□□□□□ -2.27
RTP4Q96DX8 Y_RNA.96-201ENST00000363092 109 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 RNU6-813P-201ENST00000384691 107 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 MIR181B2-201ENST00000385004 89 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 SNORD105-201ENST00000386910 85 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 Y_RNA.705-201ENST00000516862 110 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 U7.3-201ENST00000616123 62 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.83□□□□□ -2.28
RTP4Q96DX8 MALAT1.1-201ENST00000618249 95 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 AC025521.1-201ENST00000621624 286 ntBASIC0.83□□□□□ -2.28
RTP4Q96DX8 Y_RNA.290-201ENST00000364879 114 ntBASIC0.82□□□□□ -2.28
RTP4Q96DX8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.82□□□□□ -2.28
RTP4Q96DX8 RNY1P7-201ENST00000384743 110 ntBASIC0.82□□□□□ -2.28
RTP4Q96DX8 MIR516A2-201ENST00000384888 90 ntBASIC0.82□□□□□ -2.28
RTP4Q96DX8 MIR516A1-201ENST00000385033 90 ntBASIC0.82□□□□□ -2.28
RTP4Q96DX8 RNU6-887P-201ENST00000410660 100 ntBASIC0.82□□□□□ -2.28
RTP4Q96DX8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
RTP4Q96DX8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
RTP4Q96DX8 MIR101-2-201ENST00000362195 79 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 Y_RNA.32-201ENST00000362589 110 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 Y_RNA.57-201ENST00000362806 113 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 SNORD114-26-201ENST00000363543 72 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 Y_RNA.190-201ENST00000363964 101 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 RNU6-49P-201ENST00000384256 107 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 RNU6-535P-201ENST00000384722 107 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 RNU6-972P-201ENST00000391208 107 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 RNY4P30-201ENST00000410216 95 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 SNORD63B-201ENST00000411005 70 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 AP003327.1-201ENST00000529684 127 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 MIR5582-201ENST00000579697 68 ntBASIC0.81□□□□□ -2.28
RTP4Q96DX8 Y_RNA.43-201ENST00000362670 111 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 RNU6-1131P-201ENST00000364955 107 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 SNORD99-201ENST00000408612 74 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 AC092628.1-201ENST00000436250 252 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 RNU7-195P-201ENST00000458793 62 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 SNORA31.14-201ENST00000516728 116 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 AL513043.2-201ENST00000573941 143 ntBASIC0.8□□□□□ -2.28
RTP4Q96DX8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms