Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC087741.2-201ENST00000619415 172 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 TRDV1-202ENST00000621643 102 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 SNORD36A-201ENST00000362874 73 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 RNU6-770P-201ENST00000363929 105 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.4□□□□□ -2.63
TOPBP1Q92547 AC140658.3-201ENST00000567603 271 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 snoR1.1-201ENST00000628177 80 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 U6.100-201ENST00000636230 99 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.41□□□□□ -2.64
TOPBP1Q92547 RNU6-431P-201ENST00000383874 107 ntBASIC-1.41□□□□□ -2.64
TOPBP1Q92547 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.41□□□□□ -2.64
TOPBP1Q92547 RNU6-274P-201ENST00000459566 107 ntBASIC-1.41□□□□□ -2.64
TOPBP1Q92547 RNU6-240P-201ENST00000516098 97 ntBASIC-1.41□□□□□ -2.64
TOPBP1Q92547 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.41□□□□□ -2.64
TOPBP1Q92547 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.41□□□□□ -2.64
TOPBP1Q92547 MIR4744-201ENST00000581563 82 ntBASIC-1.41□□□□□ -2.64
TOPBP1Q92547 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 SNORD114-4-201ENST00000363962 75 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 SNORD27-201ENST00000363981 72 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 RNU6-119P-201ENST00000364882 107 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 AL161932.1-201ENST00000437408 146 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 RNA5SP236-201ENST00000516169 116 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 RNU6-277P-201ENST00000516272 106 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 AC026407.1-201ENST00000518369 204 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.42□□□□□ -2.64
TOPBP1Q92547 MIR548O2-201ENST00000616090 70 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 AL365265.1-201ENST00000621045 234 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 AC073869.6-201ENST00000640656 341 ntBASIC-1.42□□□□□ -2.64
TOPBP1Q92547 RNU6-103P-201ENST00000363686 107 ntBASIC-1.43□□□□□ -2.64
TOPBP1Q92547 RNU7-123P-201ENST00000515911 60 ntBASIC-1.43□□□□□ -2.64
TOPBP1Q92547 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.43□□□□□ -2.64
TOPBP1Q92547 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.43□□□□□ -2.64
TOPBP1Q92547 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.44□□□□□ -2.64
TOPBP1Q92547 RNU6-616P-201ENST00000384353 107 ntBASIC-1.44□□□□□ -2.64
TOPBP1Q92547 RNU6-876P-201ENST00000391295 104 ntBASIC-1.44□□□□□ -2.64
TOPBP1Q92547 RNU6-651P-201ENST00000411040 105 ntBASIC-1.44□□□□□ -2.64
TOPBP1Q92547 RNY3P15-201ENST00000516297 97 ntBASIC-1.44□□□□□ -2.64
TOPBP1Q92547 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 RNU6-905P-201ENST00000384434 107 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 RNU6-823P-201ENST00000391042 103 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 MIR1252-201ENST00000408861 65 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 ELOCP20-201ENST00000422460 345 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 SNORA40.15-201ENST00000516884 107 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 AC080013.6-201ENST00000606185 215 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 RNU6-623P-201ENST00000363143 105 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 SNORD38.2-201ENST00000384470 69 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 SCARNA18B-201ENST00000458806 135 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 RN7SKP19-201ENST00000516016 252 ntBASIC-1.45□□□□□ -2.64
TOPBP1Q92547 RNU6-664P-201ENST00000362381 107 ntBASIC-1.46□□□□□ -2.64
TOPBP1Q92547 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.46□□□□□ -2.64
TOPBP1Q92547 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.46□□□□□ -2.64
TOPBP1Q92547 MIR147A-201ENST00000385079 72 ntBASIC-1.46□□□□□ -2.64
TOPBP1Q92547 SNORD2.1-201ENST00000458762 69 ntBASIC-1.46□□□□□ -2.64
TOPBP1Q92547 AL442663.2-201ENST00000554385 511 ntBASIC-1.46□□□□□ -2.64
TOPBP1Q92547 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.46□□□□□ -2.64
TOPBP1Q92547 MIR382-201ENST00000637119 76 ntBASIC-1.46□□□□□ -2.64
TOPBP1Q92547 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.47□□□□□ -2.64
TOPBP1Q92547 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.47□□□□□ -2.64
TOPBP1Q92547 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.47□□□□□ -2.64
TOPBP1Q92547 MIR34C-201ENST00000384831 77 ntBASIC-1.47□□□□□ -2.64
TOPBP1Q92547 RNU6-101P-201ENST00000410323 104 ntBASIC-1.47□□□□□ -2.64
TOPBP1Q92547 AL353813.1-201ENST00000440700 253 ntBASIC-1.47□□□□□ -2.64
TOPBP1Q92547 AC090971.5-201ENST00000621102 293 ntBASIC-1.47□□□□□ -2.64
TOPBP1Q92547 RNU6-957P-201ENST00000363652 99 ntBASIC-1.48□□□□□ -2.65
TOPBP1Q92547 RNU6-578P-201ENST00000390980 103 ntBASIC-1.48□□□□□ -2.65
TOPBP1Q92547 MIR548E-201ENST00000408287 88 ntBASIC-1.48□□□□□ -2.65
TOPBP1Q92547 RNU6-806P-201ENST00000365147 105 ntBASIC-1.49□□□□□ -2.65
TOPBP1Q92547 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.49□□□□□ -2.65
TOPBP1Q92547 RNU6-762P-201ENST00000517107 102 ntBASIC-1.49□□□□□ -2.65
TOPBP1Q92547 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 snoU83B.1-201ENST00000517136 88 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 MIR4696-201ENST00000581431 70 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 MIR1302-1-201ENST00000637932 143 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 RNU4-17P-201ENST00000365598 141 ntBASIC-1.5□□□□□ -2.65
TOPBP1Q92547 MIR582-201ENST00000365731 98 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 418.9 ms