Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 RNU6-382P-201ENST00000365181 106 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 RNA5SP37-201ENST00000365420 130 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 MIR451A-201ENST00000385059 72 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 SNORD93-201ENST00000408813 74 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 AL161935.2-201ENST00000414627 60 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 AL591806.2-201ENST00000433122 173 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 RPL23AP42-201ENST00000471152 471 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 RNU1-40P-201ENST00000516816 164 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 RNU1-97P-201ENST00000516872 164 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 RNU6-295P-201ENST00000516901 104 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 MIR6845-201ENST00000613182 61 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 AC023934.1-201ENST00000574529 2389 ntBASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NEDD1Q8NHV4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD1Q8NHV4 RNU6-654P-201ENST00000364373 107 ntBASIC2.24□□□□□ -2.05
NEDD1Q8NHV4 RNU6-53P-201ENST00000365367 106 ntBASIC2.24□□□□□ -2.05
NEDD1Q8NHV4 SNORA26.9-201ENST00000391322 122 ntBASIC2.24□□□□□ -2.05
NEDD1Q8NHV4 RNU6-935P-201ENST00000410371 100 ntBASIC2.24□□□□□ -2.05
NEDD1Q8NHV4 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
NEDD1Q8NHV4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD1Q8NHV4 RNU6-403P-201ENST00000363163 104 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 RNU6-580P-201ENST00000365159 107 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 MIR583-201ENST00000384846 75 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 MIR1185-1-201ENST00000408598 86 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 RNA5SP95-201ENST00000410319 137 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 RN7SL274P-201ENST00000492268 272 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 Y_RNA.676-201ENST00000516393 96 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 Y_RNA.697-201ENST00000516776 113 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 MIR548H5-201ENST00000580314 60 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 AC092634.7-201ENST00000621022 103 ntBASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.23□□□□□ -2.05
NEDD1Q8NHV4 RNU6-369P-201ENST00000362515 102 ntBASIC2.22□□□□□ -2.05
NEDD1Q8NHV4 Y_RNA.56-201ENST00000362798 112 ntBASIC2.22□□□□□ -2.05
NEDD1Q8NHV4 RNU6-1177P-201ENST00000391058 104 ntBASIC2.22□□□□□ -2.05
NEDD1Q8NHV4 AL691482.2-201ENST00000457453 84 ntBASIC2.22□□□□□ -2.05
NEDD1Q8NHV4 RNU6-1265P-201ENST00000516342 103 ntBASIC2.22□□□□□ -2.05
NEDD1Q8NHV4 RNU6-922P-201ENST00000516753 99 ntBASIC2.22□□□□□ -2.05
NEDD1Q8NHV4 MIR4773-1-201ENST00000637203 78 ntBASIC2.22□□□□□ -2.05
NEDD1Q8NHV4 MIR377-201ENST00000362145 69 ntBASIC2.21□□□□□ -2.06
NEDD1Q8NHV4 MIR101-2-201ENST00000362195 79 ntBASIC2.21□□□□□ -2.06
NEDD1Q8NHV4 MIR2115-201ENST00000516657 100 ntBASIC2.21□□□□□ -2.06
NEDD1Q8NHV4 RNU6-548P-201ENST00000517083 115 ntBASIC2.21□□□□□ -2.06
NEDD1Q8NHV4 SNORA31.25-201ENST00000517242 134 ntBASIC2.21□□□□□ -2.06
NEDD1Q8NHV4 Y_RNA.13-201ENST00000362403 112 ntBASIC2.2□□□□□ -2.06
NEDD1Q8NHV4 SNORD113-4-201ENST00000364802 75 ntBASIC2.2□□□□□ -2.06
NEDD1Q8NHV4 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
NEDD1Q8NHV4 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
NEDD1Q8NHV4 AC003989.2-201ENST00000440224 169 ntBASIC2.2□□□□□ -2.06
NEDD1Q8NHV4 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 RNA5SP259-201ENST00000365541 109 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 Y_RNA.375-201ENST00000365625 101 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 MIR9-3-201ENST00000385084 90 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 AC244098.3-201ENST00000424803 96 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 AC097635.1-201ENST00000450678 155 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 HMGN2P23-201ENST00000456759 269 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 snoU13.21-201ENST00000459368 105 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 RNU6-752P-201ENST00000516376 102 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 MIR3920-201ENST00000581751 86 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 RNU7-10P-201ENST00000607194 63 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 MIR6082-201ENST00000613604 109 ntBASIC2.19□□□□□ -2.06
NEDD1Q8NHV4 RNA5SP192-201ENST00000364404 120 ntBASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 MIR513A1-201ENST00000385138 129 ntBASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 RNA5SP450-201ENST00000411206 102 ntBASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 MIR18B-201ENST00000454574 71 ntBASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 MIR466-201ENST00000580653 84 ntBASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 AL353997.5-201ENST00000618886 171 ntBASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NEDD1Q8NHV4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NEDD1Q8NHV4 RNU6-274P-201ENST00000459566 107 ntBASIC2.17□□□□□ -2.06
NEDD1Q8NHV4 RNU6-250P-201ENST00000516958 103 ntBASIC2.17□□□□□ -2.06
NEDD1Q8NHV4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.17□□□□□ -2.06
NEDD1Q8NHV4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
NEDD1Q8NHV4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
NEDD1Q8NHV4 SNORA25.5-201ENST00000363782 126 ntBASIC2.16□□□□□ -2.06
NEDD1Q8NHV4 MIR599-201ENST00000385069 95 ntBASIC2.16□□□□□ -2.06
NEDD1Q8NHV4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.16□□□□□ -2.06
NEDD1Q8NHV4 RNU7-185P-201ENST00000459215 60 ntBASIC2.16□□□□□ -2.06
NEDD1Q8NHV4 RNA5SP458-201ENST00000516188 119 ntBASIC2.16□□□□□ -2.06
NEDD1Q8NHV4 Y_RNA.722-201ENST00000517279 114 ntBASIC2.16□□□□□ -2.06
NEDD1Q8NHV4 U1.36-201ENST00000620684 176 ntBASIC2.16□□□□□ -2.06
NEDD1Q8NHV4 RNA5SP245-201ENST00000364239 121 ntBASIC2.15□□□□□ -2.07
NEDD1Q8NHV4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NEDD1Q8NHV4 RNU6-542P-201ENST00000516405 103 ntBASIC2.15□□□□□ -2.07
NEDD1Q8NHV4 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
NEDD1Q8NHV4 RNA5SP99-201ENST00000364020 114 ntBASIC2.14□□□□□ -2.07
NEDD1Q8NHV4 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
NEDD1Q8NHV4 RNU6-287P-201ENST00000516230 98 ntBASIC2.14□□□□□ -2.07
NEDD1Q8NHV4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
NEDD1Q8NHV4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NEDD1Q8NHV4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.13□□□□□ -2.07
NEDD1Q8NHV4 AL078603.1-201ENST00000603824 313 ntBASIC2.13□□□□□ -2.07
NEDD1Q8NHV4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 217.6 ms