Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-315P-201ENST00000362666 107 ntBASIC1.81□□□□□ -2.12
NPAS4Q8IUM7 RNU6-403P-201ENST00000363163 104 ntBASIC1.81□□□□□ -2.12
NPAS4Q8IUM7 RNU6-243P-201ENST00000391140 107 ntBASIC1.81□□□□□ -2.12
NPAS4Q8IUM7 RPS29P23-201ENST00000458635 123 ntBASIC1.81□□□□□ -2.12
NPAS4Q8IUM7 RNU1-36P-201ENST00000365130 165 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 SNORA25-201ENST00000384384 134 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 RNU6-994P-201ENST00000410507 111 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 RNU7-95P-201ENST00000459222 64 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 snoU13.21-201ENST00000459368 105 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 AC139453.2-201ENST00000487255 133 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 TRMT112P2-201ENST00000512910 132 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 AC106800.4-201ENST00000614905 153 ntBASIC1.8□□□□□ -2.12
NPAS4Q8IUM7 RNU4-58P-201ENST00000363192 141 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 Y_RNA.283-201ENST00000364798 112 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 RNU6-132P-201ENST00000383863 107 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 RNU6-811P-201ENST00000384069 107 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 MIR1287-201ENST00000408492 90 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 AC067940.1-201ENST00000458411 300 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 RNU6-75P-201ENST00000515944 104 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 SNORA18.5-201ENST00000516616 101 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 SNORD53B-201ENST00000577887 78 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 U7.4-201ENST00000614961 63 ntBASIC1.79□□□□□ -2.12
NPAS4Q8IUM7 SNORA63.2-201ENST00000362603 126 ntBASIC1.78□□□□□ -2.12
NPAS4Q8IUM7 SNORA25.8-201ENST00000364831 128 ntBASIC1.78□□□□□ -2.12
NPAS4Q8IUM7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.78□□□□□ -2.12
NPAS4Q8IUM7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NPAS4Q8IUM7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.78□□□□□ -2.12
NPAS4Q8IUM7 SNORD63B-201ENST00000411005 70 ntBASIC1.78□□□□□ -2.12
NPAS4Q8IUM7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.78□□□□□ -2.12
NPAS4Q8IUM7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NPAS4Q8IUM7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.13
NPAS4Q8IUM7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 RNU6-1094P-201ENST00000362416 104 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 RNU6-161P-201ENST00000363051 106 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 RNU6-957P-201ENST00000363652 99 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 RNU6-53P-201ENST00000365367 106 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 AC036111.3-201ENST00000526389 112 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 AC023827.1-201ENST00000569247 97 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 AC013244.2-201ENST00000603396 103 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 Y_RNA.788-201ENST00000622394 112 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 AC023934.1-201ENST00000574529 2389 ntBASIC1.77□□□□□ -2.13
NPAS4Q8IUM7 MIRLET7F1-201ENST00000362202 87 ntBASIC1.76□□□□□ -2.13
NPAS4Q8IUM7 SNORD100-201ENST00000408573 76 ntBASIC1.76□□□□□ -2.13
NPAS4Q8IUM7 RNU6-1108P-201ENST00000516308 104 ntBASIC1.76□□□□□ -2.13
NPAS4Q8IUM7 MIR3064-201ENST00000581130 66 ntBASIC1.76□□□□□ -2.13
NPAS4Q8IUM7 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.76□□□□□ -2.13
NPAS4Q8IUM7 RNA5SP327-201ENST00000362494 101 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 SNORD26-201ENST00000384147 75 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 MIR1257-201ENST00000408490 117 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 SNORD83.1-201ENST00000411362 77 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 AC015818.7-201ENST00000428754 109 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 RNU7-185P-201ENST00000459215 60 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 TRAJ51-201ENST00000504127 63 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 AL645939.4-201ENST00000604495 135 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 MIR8070-201ENST00000616510 88 ntBASIC1.75□□□□□ -2.13
NPAS4Q8IUM7 MIRLET7A1-201ENST00000362295 80 ntBASIC1.74□□□□□ -2.13
NPAS4Q8IUM7 RNU1-42P-201ENST00000364033 160 ntBASIC1.74□□□□□ -2.13
NPAS4Q8IUM7 RNU6-686P-201ENST00000364839 107 ntBASIC1.74□□□□□ -2.13
NPAS4Q8IUM7 RNU6-466P-201ENST00000391224 103 ntBASIC1.74□□□□□ -2.13
NPAS4Q8IUM7 SUMO2P12-201ENST00000405924 140 ntBASIC1.74□□□□□ -2.13
NPAS4Q8IUM7 RNU7-195P-201ENST00000458793 62 ntBASIC1.74□□□□□ -2.13
NPAS4Q8IUM7 RNU6-557P-201ENST00000516842 110 ntBASIC1.74□□□□□ -2.13
NPAS4Q8IUM7 AC104996.3-201ENST00000590718 94 ntBASIC1.74□□□□□ -2.13
NPAS4Q8IUM7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.73□□□□□ -2.13
NPAS4Q8IUM7 RNU6-934P-201ENST00000365154 107 ntBASIC1.73□□□□□ -2.13
NPAS4Q8IUM7 Y_RNA.536-201ENST00000384621 113 ntBASIC1.73□□□□□ -2.13
NPAS4Q8IUM7 MIR635-201ENST00000384830 98 ntBASIC1.73□□□□□ -2.13
NPAS4Q8IUM7 SNORA67.6-201ENST00000391093 99 ntBASIC1.73□□□□□ -2.13
NPAS4Q8IUM7 SCARNA18B-201ENST00000458806 135 ntBASIC1.73□□□□□ -2.13
NPAS4Q8IUM7 RNU6-1194P-201ENST00000516208 104 ntBASIC1.73□□□□□ -2.13
NPAS4Q8IUM7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 MIR101-2-201ENST00000362195 79 ntBASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 Y_RNA.491-201ENST00000384417 107 ntBASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 MIR499A-201ENST00000384903 122 ntBASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 SNORD90-201ENST00000391145 111 ntBASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 AC004223.1-201ENST00000479840 271 ntBASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 SNORD92-201ENST00000585078 85 ntBASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 BX248123.2-201ENST00000606318 124 ntBASIC1.72□□□□□ -2.13
NPAS4Q8IUM7 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
NPAS4Q8IUM7 MIR548U-201ENST00000390728 81 ntBASIC1.71□□□□□ -2.14
NPAS4Q8IUM7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NPAS4Q8IUM7 RNU7-40P-201ENST00000516397 64 ntBASIC1.71□□□□□ -2.14
NPAS4Q8IUM7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.71□□□□□ -2.14
NPAS4Q8IUM7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.71□□□□□ -2.14
NPAS4Q8IUM7 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
NPAS4Q8IUM7 Y_RNA.545-201ENST00000384652 105 ntBASIC1.7□□□□□ -2.14
NPAS4Q8IUM7 MIR518E-201ENST00000385252 88 ntBASIC1.7□□□□□ -2.14
NPAS4Q8IUM7 AL606490.4-201ENST00000423117 127 ntBASIC1.7□□□□□ -2.14
NPAS4Q8IUM7 RNU6-523P-201ENST00000516304 54 ntBASIC1.7□□□□□ -2.14
NPAS4Q8IUM7 MIR3134-201ENST00000579433 74 ntBASIC1.7□□□□□ -2.14
NPAS4Q8IUM7 MIR6082-201ENST00000613604 109 ntBASIC1.7□□□□□ -2.14
NPAS4Q8IUM7 AC027335.2-201ENST00000624030 375 ntBASIC1.7□□□□□ -2.14
NPAS4Q8IUM7 SNORA25.9-201ENST00000365087 128 ntBASIC1.69□□□□□ -2.14
NPAS4Q8IUM7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.69□□□□□ -2.14
NPAS4Q8IUM7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.69□□□□□ -2.14
NPAS4Q8IUM7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.69□□□□□ -2.14
NPAS4Q8IUM7 AC002429.1-201ENST00000437672 148 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms