Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNU6-429P-201ENST00000384582 108 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 Y_RNA.563-201ENST00000384707 108 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 RNU6-1307P-201ENST00000391012 103 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 Y_RNA.610-201ENST00000410681 103 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 SNORD57-201ENST00000448188 72 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 RNU7-48P-201ENST00000458875 63 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 RNU6-521P-201ENST00000516663 105 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 RNU6-531P-201ENST00000516694 104 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.39□□□□□ -2.35
PTCH1Q13635 MIR4679-2-201ENST00000578358 77 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 MIR3612-201ENST00000579753 87 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 U6.109-201ENST00000636749 87 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 AC132825.6-201ENST00000638861 357 ntBASIC0.39□□□□□ -2.35
PTCH1Q13635 Y_RNA.35-201ENST00000362601 101 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 RNU6-363P-201ENST00000362895 105 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 Y_RNA.344-201ENST00000365381 112 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 Y_RNA.448-201ENST00000384185 108 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 SNORA72.6-201ENST00000384520 129 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 Y_RNA.536-201ENST00000384621 113 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 MIR604-201ENST00000384880 94 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 RNU6-1333P-201ENST00000516162 93 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 DEFB131E-201ENST00000532329 154 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 MIR1255B1-201ENST00000636325 63 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 MIR18A-201ENST00000362310 71 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 RNA5SP117-201ENST00000365294 118 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 AC008267.6-201ENST00000441664 139 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 RPL39P34-201ENST00000477141 156 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 MTND5P34-201ENST00000568888 325 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 MIR4500-201ENST00000579472 76 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 MIR4493-201ENST00000584016 73 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 AL365222.1-201ENST00000614661 98 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 uc_338.16-201ENST00000621804 95 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 U6.95-201ENST00000636931 70 ntBASIC0.38□□□□□ -2.35
PTCH1Q13635 Y_RNA.261-201ENST00000364631 102 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 SNORD113-1-201ENST00000365321 69 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 Y_RNA.353-201ENST00000365440 108 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 RNU4-45P-201ENST00000365469 141 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 Y_RNA.362-201ENST00000365518 110 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 RNU6-22P-201ENST00000384355 107 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 RNU6-1117P-201ENST00000384525 104 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 Y_RNA.649-201ENST00000459077 103 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 Y_RNA.697-201ENST00000516776 113 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 AC007012.1-201ENST00000567192 175 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.37□□□□□ -2.35
PTCH1Q13635 MIR376B-201ENST00000614515 100 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 AP001362.1-201ENST00000625165 124 ntBASIC0.37□□□□□ -2.35
PTCH1Q13635 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
PTCH1Q13635 Y_RNA.56-201ENST00000362798 112 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 Y_RNA.174-201ENST00000363781 105 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 SNORD95.1-201ENST00000364099 68 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 RNU6-865P-201ENST00000364772 107 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 Y_RNA.360-201ENST00000365512 102 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 RNU6-291P-201ENST00000384720 107 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 RNU6-535P-201ENST00000384722 107 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 RNU6-1168P-201ENST00000390831 104 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 RNU6-62P-201ENST00000516526 102 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 RNU6-1018P-201ENST00000516577 106 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 SNORA31.14-201ENST00000516728 116 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 RNU6-789P-201ENST00000517105 102 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 MIR3678-201ENST00000578455 94 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 AL162726.3-218ENST00000636401 95 ntBASIC0.36□□□□□ -2.35
PTCH1Q13635 MIR101-2-201ENST00000362195 79 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 RNU6-409P-201ENST00000384114 104 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 Y_RNA.507-201ENST00000384500 99 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 MIR34C-201ENST00000384831 77 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 MIR548A1-201ENST00000385041 97 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 MIR548A3-201ENST00000385297 97 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 RNU6-679P-201ENST00000391003 106 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 SNORA7.5-201ENST00000410672 110 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 SNORD33.1-201ENST00000516213 88 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 AL670379.3-201ENST00000605040 251 ntBASIC0.35□□□□□ -2.35
PTCH1Q13635 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 RNA5SP245-201ENST00000364239 121 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 RNA5SP205-201ENST00000364653 136 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 MIR644A-201ENST00000385262 94 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 RNU6-816P-201ENST00000390914 107 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 RNU6-1268P-201ENST00000391214 107 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 RNU6-1239P-201ENST00000391310 107 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 MIR548I2-201ENST00000408348 149 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 AL606753.1-201ENST00000427435 87 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 AL353813.1-201ENST00000440700 253 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 RNU6-479P-201ENST00000516348 105 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 RNU6-406P-201ENST00000516470 107 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 MIR548H5-201ENST00000580314 60 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 AL512310.12-203ENST00000640543 90 ntBASIC0.34□□□□□ -2.36
PTCH1Q13635 Y_RNA.32-201ENST00000362589 110 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 RNU6-1313P-201ENST00000362622 102 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 SNORA63.5-201ENST00000363548 123 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 Y_RNA.155-201ENST00000363632 101 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 Y_RNA.309-201ENST00000365046 111 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 RNU6-1126P-201ENST00000384002 107 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 MIR635-201ENST00000384830 98 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 BX276092.1-201ENST00000427368 251 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 RNU6-1006P-201ENST00000516998 103 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 AP001180.6-201ENST00000584918 159 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 AL035470.1-201ENST00000622571 220 ntBASIC0.33□□□□□ -2.36
PTCH1Q13635 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms