Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR4499-201ENST00000584834 69 ntBASIC-1.09□□□□□ -2.58
RPL28P46779 AC021443.1-201ENST00000604478 211 ntBASIC-1.09□□□□□ -2.58
RPL28P46779 MIR548O2-201ENST00000616090 70 ntBASIC-1.09□□□□□ -2.58
RPL28P46779 SNORD36A-201ENST00000362874 73 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 RNU6-616P-201ENST00000384353 107 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 AC138393.2-201ENST00000414742 246 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 RNU6-240P-201ENST00000516098 97 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 SCARNA17-201ENST00000516183 144 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 AC138907.4-201ENST00000570107 226 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 uc_338.19-201ENST00000616808 99 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 AC090971.5-201ENST00000621102 293 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.1□□□□□ -2.59
RPL28P46779 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.11□□□□□ -2.59
RPL28P46779 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.11□□□□□ -2.59
RPL28P46779 MIR147A-201ENST00000385079 72 ntBASIC-1.11□□□□□ -2.59
RPL28P46779 SNORD64-201ENST00000386683 67 ntBASIC-1.11□□□□□ -2.59
RPL28P46779 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.11□□□□□ -2.59
RPL28P46779 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.11□□□□□ -2.59
RPL28P46779 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.11□□□□□ -2.59
RPL28P46779 MIR4282-201ENST00000583613 67 ntBASIC-1.11□□□□□ -2.59
RPL28P46779 SNORD27-201ENST00000363981 72 ntBASIC-1.12□□□□□ -2.59
RPL28P46779 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.12□□□□□ -2.59
RPL28P46779 RNU6-905P-201ENST00000384434 107 ntBASIC-1.12□□□□□ -2.59
RPL28P46779 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.12□□□□□ -2.59
RPL28P46779 RNU6-578P-201ENST00000390980 103 ntBASIC-1.13□□□□□ -2.59
RPL28P46779 RNU6-592P-201ENST00000411333 103 ntBASIC-1.13□□□□□ -2.59
RPL28P46779 AL353813.1-201ENST00000440700 253 ntBASIC-1.13□□□□□ -2.59
RPL28P46779 SCARNA18B-201ENST00000458806 135 ntBASIC-1.13□□□□□ -2.59
RPL28P46779 HAR1A.1-201ENST00000459583 118 ntBASIC-1.13□□□□□ -2.59
RPL28P46779 RNU6-957P-201ENST00000363652 99 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 RNU6-643P-201ENST00000384018 107 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 MIR216B-201ENST00000390186 82 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 RNU6-243P-201ENST00000391140 107 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 MTND5P22-201ENST00000458380 195 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.14□□□□□ -2.59
RPL28P46779 AC140658.3-201ENST00000567603 271 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 MIR6738-201ENST00000619620 64 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 MIR382-201ENST00000637119 76 ntBASIC-1.14□□□□□ -2.59
RPL28P46779 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.15□□□□□ -2.59
RPL28P46779 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.15□□□□□ -2.59
RPL28P46779 AC113618.1-201ENST00000416747 285 ntBASIC-1.15□□□□□ -2.59
RPL28P46779 RNU6-274P-201ENST00000459566 107 ntBASIC-1.15□□□□□ -2.59
RPL28P46779 U2.14-201ENST00000615943 113 ntBASIC-1.15□□□□□ -2.59
RPL28P46779 RNU6-235P-201ENST00000362644 107 ntBASIC-1.16□□□□□ -2.6
RPL28P46779 RNU6-54P-201ENST00000365563 107 ntBASIC-1.16□□□□□ -2.6
RPL28P46779 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.16□□□□□ -2.6
RPL28P46779 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.16□□□□□ -2.6
RPL28P46779 RNU6-762P-201ENST00000517107 102 ntBASIC-1.16□□□□□ -2.6
RPL28P46779 MIR4696-201ENST00000581431 70 ntBASIC-1.16□□□□□ -2.6
RPL28P46779 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.17□□□□□ -2.6
RPL28P46779 SNORD115-23-201ENST00000364461 82 ntBASIC-1.17□□□□□ -2.6
RPL28P46779 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.17□□□□□ -2.6
RPL28P46779 MIR587-201ENST00000384845 96 ntBASIC-1.17□□□□□ -2.6
RPL28P46779 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.17□□□□□ -2.6
RPL28P46779 RNY1P9-201ENST00000532431 109 ntBASIC-1.17□□□□□ -2.6
RPL28P46779 MIR4324-201ENST00000584846 72 ntBASIC-1.17□□□□□ -2.6
RPL28P46779 U6atac.1-201ENST00000616025 117 ntBASIC-1.17□□□□□ -2.6
RPL28P46779 RNU6-664P-201ENST00000362381 107 ntBASIC-1.18□□□□□ -2.6
RPL28P46779 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.18□□□□□ -2.6
RPL28P46779 SNORD101-201ENST00000384027 73 ntBASIC-1.18□□□□□ -2.6
RPL28P46779 SNORD57-201ENST00000448188 72 ntBASIC-1.18□□□□□ -2.6
RPL28P46779 MIR6773-201ENST00000612812 74 ntBASIC-1.18□□□□□ -2.6
RPL28P46779 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 RNY3P1-201ENST00000365085 102 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 RNU6-10P-201ENST00000384036 107 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 SNORD38.2-201ENST00000384470 69 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 RNU6-521P-201ENST00000516663 105 ntBASIC-1.19□□□□□ -2.6
RPL28P46779 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 MIRLET7B-201ENST00000385140 83 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 RNU6-337P-201ENST00000391243 106 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 MTATP6P21-201ENST00000440681 189 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 SNORD42B-201ENST00000458893 67 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 SNORD18.2-201ENST00000459604 70 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 MTND3P22-201ENST00000510932 243 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 MIR378F-201ENST00000578143 78 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.2□□□□□ -2.6
RPL28P46779 snoR1.1-201ENST00000628177 80 ntBASIC-1.2□□□□□ -2.6
RPL28P46779 SNORD114-4-201ENST00000363962 75 ntBASIC-1.21□□□□□ -2.6
RPL28P46779 SNORD42.2-201ENST00000365570 69 ntBASIC-1.21□□□□□ -2.6
RPL28P46779 RNU6-935P-201ENST00000410371 100 ntBASIC-1.21□□□□□ -2.6
RPL28P46779 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.21□□□□□ -2.6
RPL28P46779 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.21□□□□□ -2.6
RPL28P46779 AP002392.1-201ENST00000537692 208 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms