Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNU1-41P-201ENST00000516161 162 ntBASIC2.06□□□□□ -2.08
GPC1P35052 RNU1-48P-201ENST00000516400 162 ntBASIC2.06□□□□□ -2.08
GPC1P35052 AC036111.3-201ENST00000526389 112 ntBASIC2.06□□□□□ -2.08
GPC1P35052 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.05□□□□□ -2.08
GPC1P35052 RNU6-364P-201ENST00000384387 107 ntBASIC2.05□□□□□ -2.08
GPC1P35052 SNORA3.2-201ENST00000408221 125 ntBASIC2.05□□□□□ -2.08
GPC1P35052 RNU4-53P-201ENST00000410828 140 ntBASIC2.05□□□□□ -2.08
GPC1P35052 AC048334.1-201ENST00000477975 159 ntBASIC2.05□□□□□ -2.08
GPC1P35052 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
GPC1P35052 RNU6-1057P-201ENST00000517162 102 ntBASIC2.05□□□□□ -2.08
GPC1P35052 AC023827.1-201ENST00000569247 97 ntBASIC2.05□□□□□ -2.08
GPC1P35052 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
GPC1P35052 AC103810.8-201ENST00000607347 118 ntBASIC2.05□□□□□ -2.08
GPC1P35052 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
GPC1P35052 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
GPC1P35052 SNORD33-201ENST00000362761 85 ntBASIC2.04□□□□□ -2.08
GPC1P35052 RNU6-824P-201ENST00000363724 104 ntBASIC2.04□□□□□ -2.08
GPC1P35052 RNA5SP245-201ENST00000364239 121 ntBASIC2.04□□□□□ -2.08
GPC1P35052 SNORD45A-201ENST00000384512 84 ntBASIC2.04□□□□□ -2.08
GPC1P35052 MIR30A-201ENST00000385092 71 ntBASIC2.04□□□□□ -2.08
GPC1P35052 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
GPC1P35052 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
GPC1P35052 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.04□□□□□ -2.08
GPC1P35052 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.04□□□□□ -2.08
GPC1P35052 SNORD45.1-201ENST00000363181 77 ntBASIC2.03□□□□□ -2.08
GPC1P35052 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
GPC1P35052 SNORA75.2-201ENST00000391138 150 ntBASIC2.03□□□□□ -2.08
GPC1P35052 SNORA75.3-201ENST00000391231 150 ntBASIC2.03□□□□□ -2.08
GPC1P35052 Y_RNA.606-201ENST00000410579 103 ntBASIC2.03□□□□□ -2.08
GPC1P35052 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
GPC1P35052 AL645939.4-201ENST00000604495 135 ntBASIC2.03□□□□□ -2.08
GPC1P35052 MTRNR2L2-201ENST00000604882 87 ntBASIC2.03□□□□□ -2.08
GPC1P35052 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
GPC1P35052 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
GPC1P35052 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
GPC1P35052 SNORA70B-201ENST00000384210 135 ntBASIC2.02□□□□□ -2.09
GPC1P35052 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
GPC1P35052 RPL23AP42-201ENST00000471152 471 ntBASIC2.02□□□□□ -2.09
GPC1P35052 RNU7-40P-201ENST00000516397 64 ntBASIC2.02□□□□□ -2.09
GPC1P35052 AL512310.8-201ENST00000550183 120 ntBASIC2.02□□□□□ -2.09
GPC1P35052 MIR4676-201ENST00000583078 72 ntBASIC2.02□□□□□ -2.09
GPC1P35052 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
GPC1P35052 SNORA24B-201ENST00000384176 131 ntBASIC2.01□□□□□ -2.09
GPC1P35052 RPS26P5-201ENST00000418544 335 ntBASIC2.01□□□□□ -2.09
GPC1P35052 AC093423.1-201ENST00000440817 142 ntBASIC2.01□□□□□ -2.09
GPC1P35052 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
GPC1P35052 SNORA44.1-201ENST00000517031 108 ntBASIC2.01□□□□□ -2.09
GPC1P35052 U6.81-201ENST00000612550 106 ntBASIC2.01□□□□□ -2.09
GPC1P35052 MIR6715A-201ENST00000615929 79 ntBASIC2.01□□□□□ -2.09
GPC1P35052 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.01□□□□□ -2.09
GPC1P35052 MIR4773-1-201ENST00000637203 78 ntBASIC2.01□□□□□ -2.09
GPC1P35052 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
GPC1P35052 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
GPC1P35052 RNU6-630P-201ENST00000391258 106 ntBASIC2□□□□□ -2.09
GPC1P35052 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
GPC1P35052 MIR2113-201ENST00000459007 91 ntBASIC2□□□□□ -2.09
GPC1P35052 RNU6-1265P-201ENST00000516342 103 ntBASIC2□□□□□ -2.09
GPC1P35052 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
GPC1P35052 RN7SKP88-201ENST00000516847 250 ntBASIC2□□□□□ -2.09
GPC1P35052 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
GPC1P35052 AC005520.4-201ENST00000604337 90 ntBASIC2□□□□□ -2.09
GPC1P35052 7SK.8-201ENST00000612110 250 ntBASIC2□□□□□ -2.09
GPC1P35052 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2□□□□□ -2.09
GPC1P35052 7SK.11-201ENST00000615477 250 ntBASIC2□□□□□ -2.09
GPC1P35052 7SK.13-201ENST00000622040 250 ntBASIC2□□□□□ -2.09
GPC1P35052 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
GPC1P35052 RNU6-471P-201ENST00000383944 106 ntBASIC1.99□□□□□ -2.09
GPC1P35052 MIR938-201ENST00000401216 83 ntBASIC1.99□□□□□ -2.09
GPC1P35052 SNORD111-201ENST00000408139 94 ntBASIC1.99□□□□□ -2.09
GPC1P35052 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.99□□□□□ -2.09
GPC1P35052 SNORA31.2-201ENST00000516019 134 ntBASIC1.99□□□□□ -2.09
GPC1P35052 RNU6-881P-201ENST00000516813 102 ntBASIC1.99□□□□□ -2.09
GPC1P35052 AC008608.1-201ENST00000603910 127 ntBASIC1.99□□□□□ -2.09
GPC1P35052 AC027335.2-201ENST00000624030 375 ntBASIC1.99□□□□□ -2.09
GPC1P35052 RNU6-994P-201ENST00000410507 111 ntBASIC1.98□□□□□ -2.09
GPC1P35052 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
GPC1P35052 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.98□□□□□ -2.09
GPC1P35052 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.98□□□□□ -2.09
GPC1P35052 RNU7-102P-201ENST00000458948 62 ntBASIC1.98□□□□□ -2.09
GPC1P35052 RNU6-287P-201ENST00000516230 98 ntBASIC1.98□□□□□ -2.09
GPC1P35052 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
GPC1P35052 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.98□□□□□ -2.09
GPC1P35052 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.98□□□□□ -2.09
GPC1P35052 AC106800.4-201ENST00000614905 153 ntBASIC1.98□□□□□ -2.09
GPC1P35052 RNU6-1177P-201ENST00000391058 104 ntBASIC1.97□□□□□ -2.09
GPC1P35052 MIR934-201ENST00000401241 83 ntBASIC1.97□□□□□ -2.09
GPC1P35052 AL356320.1-201ENST00000429616 163 ntBASIC1.97□□□□□ -2.09
GPC1P35052 RNU6-274P-201ENST00000459566 107 ntBASIC1.97□□□□□ -2.09
GPC1P35052 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
GPC1P35052 AC104984.5-201ENST00000586878 94 ntBASIC1.97□□□□□ -2.09
GPC1P35052 MIR8053-201ENST00000613344 75 ntBASIC1.97□□□□□ -2.09
GPC1P35052 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
GPC1P35052 RNU6-604P-201ENST00000390917 100 ntBASIC1.96□□□□□ -2.1
GPC1P35052 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
GPC1P35052 RN7SKP223-201ENST00000410582 62 ntBASIC1.95□□□□□ -2.1
GPC1P35052 RNU6-977P-201ENST00000516411 103 ntBASIC1.95□□□□□ -2.1
GPC1P35052 AL157834.3-201ENST00000615543 103 ntBASIC1.95□□□□□ -2.1
GPC1P35052 uc_338.20-201ENST00000621563 178 ntBASIC1.95□□□□□ -2.1
GPC1P35052 SNORD115-22-201ENST00000364456 82 ntBASIC1.94□□□□□ -2.1
GPC1P35052 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms