Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.97□□□□□ -2.72
SDC4P31431 RNU6-415P-201ENST00000516252 97 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 SNORA40.14-201ENST00000516543 86 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 RNU6-521P-201ENST00000516663 105 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 SNORA20.3-201ENST00000516880 132 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 SNORD116.3-201ENST00000517176 78 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 MIR4770-201ENST00000579149 58 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 RNU4-17P-201ENST00000365598 141 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 RNU6-466P-201ENST00000391224 103 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 MIR548H3-201ENST00000408771 118 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 AC108081.1-201ENST00000604358 221 ntBASIC-1.98□□□□□ -2.73
SDC4P31431 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 RNU6-326P-201ENST00000365480 107 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 SNORD38.2-201ENST00000384470 69 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 RNU6-381P-201ENST00000391259 108 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 AC113618.1-201ENST00000416747 285 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 AC021146.9-201ENST00000512503 156 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 RNU6-412P-201ENST00000516434 106 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 AC112487.2-201ENST00000637950 304 ntBASIC-1.99□□□□□ -2.73
SDC4P31431 Y_RNA.54-201ENST00000362766 105 ntBASIC-2□□□□□ -2.73
SDC4P31431 SNORA2.1-201ENST00000363089 137 ntBASIC-2□□□□□ -2.73
SDC4P31431 AC022028.1-201ENST00000412054 408 ntBASIC-2□□□□□ -2.73
SDC4P31431 Y_RNA.773-201ENST00000607168 90 ntBASIC-2□□□□□ -2.73
SDC4P31431 AC025253.1-201ENST00000613623 543 ntBASIC-2□□□□□ -2.73
SDC4P31431 AL606534.2-204ENST00000635008 178 ntBASIC-2□□□□□ -2.73
SDC4P31431 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-2□□□□□ -2.73
SDC4P31431 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 U3.27-201ENST00000391237 200 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 RNU6-121P-201ENST00000410525 99 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 AL121914.1-201ENST00000450188 156 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 FGF7P7-201ENST00000514120 227 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.01□□□□□ -2.73
SDC4P31431 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.02□□□□□ -2.73
SDC4P31431 RNU6-924P-201ENST00000362926 108 ntBASIC-2.02□□□□□ -2.73
SDC4P31431 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.02□□□□□ -2.73
SDC4P31431 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.02□□□□□ -2.73
SDC4P31431 MIR507-201ENST00000385234 94 ntBASIC-2.02□□□□□ -2.73
SDC4P31431 RNU6-651P-201ENST00000411040 105 ntBASIC-2.02□□□□□ -2.73
SDC4P31431 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.02□□□□□ -2.73
SDC4P31431 RNA5SP461-201ENST00000516451 104 ntBASIC-2.02□□□□□ -2.73
SDC4P31431 MTND4LP30-201ENST00000454092 297 ntBASIC-2.03□□□□□ -2.73
SDC4P31431 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.03□□□□□ -2.73
SDC4P31431 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.04□□□□□ -2.74
SDC4P31431 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.04□□□□□ -2.74
SDC4P31431 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.04□□□□□ -2.74
SDC4P31431 RNU6-164P-201ENST00000364604 103 ntBASIC-2.04□□□□□ -2.74
SDC4P31431 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.04□□□□□ -2.74
SDC4P31431 RNU6-495P-201ENST00000362995 107 ntBASIC-2.05□□□□□ -2.74
SDC4P31431 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.05□□□□□ -2.74
SDC4P31431 MIR181A1-201ENST00000385026 110 ntBASIC-2.05□□□□□ -2.74
SDC4P31431 RNU6-75P-201ENST00000515944 104 ntBASIC-2.05□□□□□ -2.74
SDC4P31431 AC037487.3-201ENST00000606668 112 ntBASIC-2.05□□□□□ -2.74
SDC4P31431 MTND4LP32-201ENST00000636111 270 ntBASIC-2.05□□□□□ -2.74
SDC4P31431 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.06□□□□□ -2.74
SDC4P31431 AL078595.1-201ENST00000404458 226 ntBASIC-2.06□□□□□ -2.74
SDC4P31431 RNU2-16P-201ENST00000410712 136 ntBASIC-2.06□□□□□ -2.74
SDC4P31431 AC092794.1-201ENST00000612734 582 ntBASIC-2.06□□□□□ -2.74
SDC4P31431 AL138825.1-201ENST00000618587 192 ntBASIC-2.06□□□□□ -2.74
SDC4P31431 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 RNU6-508P-201ENST00000363231 103 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 SNORD116-6-201ENST00000384711 96 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 MIR548G-201ENST00000408442 89 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 MIR1255B2-201ENST00000408618 67 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.07□□□□□ -2.74
SDC4P31431 RNY4P20-201ENST00000516678 93 ntBASIC-2.07□□□□□ -2.74
SDC4P31431 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 Y_RNA.453-201ENST00000384223 109 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 FGF7P6-202ENST00000451282 293 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 AP002795.1-201ENST00000534879 84 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 MIR3140-201ENST00000583685 90 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 RNU6-90P-201ENST00000606352 106 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 MIR1255B1-201ENST00000636325 63 ntBASIC-2.08□□□□□ -2.74
SDC4P31431 SNORD116-2-201ENST00000384274 95 ntBASIC-2.09□□□□□ -2.74
SDC4P31431 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.09□□□□□ -2.74
SDC4P31431 AL353691.2-201ENST00000443795 59 ntBASIC-2.09□□□□□ -2.74
SDC4P31431 RNU7-6P-201ENST00000516845 62 ntBASIC-2.09□□□□□ -2.74
SDC4P31431 Y_RNA.717-201ENST00000517106 92 ntBASIC-2.09□□□□□ -2.74
SDC4P31431 AL365265.1-201ENST00000621045 234 ntBASIC-2.09□□□□□ -2.74
SDC4P31431 AC090574.1-201ENST00000623186 233 ntBASIC-2.09□□□□□ -2.74
SDC4P31431 MIR3688-2-201ENST00000636963 87 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 222.4 ms