Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SNORA40.15-201ENST00000516884 107 ntBASIC-1.27□□□□□ -2.61
HLA-DMBP28068 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 RNU6-431P-201ENST00000383874 107 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 SNORD64-201ENST00000386683 67 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 ELOCP20-201ENST00000422460 345 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 RNU7-164P-201ENST00000459221 62 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 RNU7-123P-201ENST00000515911 60 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 AC138907.4-201ENST00000570107 226 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 AC021443.1-201ENST00000604478 211 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 U6.100-201ENST00000636230 99 ntBASIC-1.28□□□□□ -2.61
HLA-DMBP28068 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 RNU6-476P-201ENST00000384726 107 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 MIR216B-201ENST00000390186 82 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 RNU6-651P-201ENST00000411040 105 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 MIR4744-201ENST00000581563 82 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 MIR5704-201ENST00000584029 77 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 MIR6854-201ENST00000614935 69 ntBASIC-1.29□□□□□ -2.62
HLA-DMBP28068 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 RNU6-450P-201ENST00000364654 107 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 MIR147A-201ENST00000385079 72 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 RNU6-240P-201ENST00000516098 97 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 RNY3P15-201ENST00000516297 97 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 AL442663.2-201ENST00000554385 511 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 MIR4282-201ENST00000583613 67 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 MIR548O2-201ENST00000616090 70 ntBASIC-1.3□□□□□ -2.62
HLA-DMBP28068 RNU6-616P-201ENST00000384353 107 ntBASIC-1.31□□□□□ -2.62
HLA-DMBP28068 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.31□□□□□ -2.62
HLA-DMBP28068 AC138393.2-201ENST00000414742 246 ntBASIC-1.31□□□□□ -2.62
HLA-DMBP28068 FGF7P4-201ENST00000509595 295 ntBASIC-1.31□□□□□ -2.62
HLA-DMBP28068 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.31□□□□□ -2.62
HLA-DMBP28068 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.31□□□□□ -2.62
HLA-DMBP28068 MIR3115-201ENST00000577915 68 ntBASIC-1.31□□□□□ -2.62
HLA-DMBP28068 MIR382-201ENST00000637119 76 ntBASIC-1.31□□□□□ -2.62
HLA-DMBP28068 SNORD36A-201ENST00000362874 73 ntBASIC-1.32□□□□□ -2.62
HLA-DMBP28068 RNU6-806P-201ENST00000365147 105 ntBASIC-1.32□□□□□ -2.62
HLA-DMBP28068 MIR34C-201ENST00000384831 77 ntBASIC-1.32□□□□□ -2.62
HLA-DMBP28068 RNU6-101P-201ENST00000410323 104 ntBASIC-1.32□□□□□ -2.62
HLA-DMBP28068 SNORD27-201ENST00000363981 72 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 RNU6-643P-201ENST00000384018 107 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 RNU6-578P-201ENST00000390980 103 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 AL161932.1-201ENST00000437408 146 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.33□□□□□ -2.62
HLA-DMBP28068 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.33□□□□□ -2.62
HLA-DMBP28068 MIR4306-201ENST00000583390 91 ntBASIC-1.33□□□□□ -2.62
HLA-DMBP28068 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 MIR582-201ENST00000365731 98 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 RNU6-243P-201ENST00000391140 107 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 MIR548E-201ENST00000408287 88 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 MIR8068-201ENST00000618032 68 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 AC090971.5-201ENST00000621102 293 ntBASIC-1.34□□□□□ -2.62
HLA-DMBP28068 SNORD38.2-201ENST00000384470 69 ntBASIC-1.35□□□□□ -2.63
HLA-DMBP28068 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.35□□□□□ -2.63
HLA-DMBP28068 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.36□□□□□ -2.63
HLA-DMBP28068 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.36□□□□□ -2.63
HLA-DMBP28068 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.36□□□□□ -2.63
HLA-DMBP28068 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.37□□□□□ -2.63
HLA-DMBP28068 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.37□□□□□ -2.63
HLA-DMBP28068 AC113618.1-201ENST00000416747 285 ntBASIC-1.37□□□□□ -2.63
HLA-DMBP28068 MTND5P22-201ENST00000458380 195 ntBASIC-1.37□□□□□ -2.63
HLA-DMBP28068 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.37□□□□□ -2.63
HLA-DMBP28068 MTND3P22-201ENST00000510932 243 ntBASIC-1.37□□□□□ -2.63
HLA-DMBP28068 U2.14-201ENST00000615943 113 ntBASIC-1.37□□□□□ -2.63
HLA-DMBP28068 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.38□□□□□ -2.63
HLA-DMBP28068 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.38□□□□□ -2.63
HLA-DMBP28068 RNU6-905P-201ENST00000384434 107 ntBASIC-1.38□□□□□ -2.63
HLA-DMBP28068 RNU6-592P-201ENST00000411333 103 ntBASIC-1.38□□□□□ -2.63
HLA-DMBP28068 MTATP6P21-201ENST00000440681 189 ntBASIC-1.38□□□□□ -2.63
HLA-DMBP28068 snoU83B.1-201ENST00000517136 88 ntBASIC-1.38□□□□□ -2.63
HLA-DMBP28068 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.38□□□□□ -2.63
HLA-DMBP28068 RNU6-957P-201ENST00000363652 99 ntBASIC-1.39□□□□□ -2.63
HLA-DMBP28068 AL353813.1-201ENST00000440700 253 ntBASIC-1.39□□□□□ -2.63
HLA-DMBP28068 AC097510.1-201ENST00000510945 133 ntBASIC-1.39□□□□□ -2.63
HLA-DMBP28068 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.39□□□□□ -2.63
HLA-DMBP28068 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.39□□□□□ -2.63
HLA-DMBP28068 RNU6-235P-201ENST00000362644 107 ntBASIC-1.4□□□□□ -2.63
HLA-DMBP28068 SNORD114-4-201ENST00000363962 75 ntBASIC-1.4□□□□□ -2.63
HLA-DMBP28068 SNORD101-201ENST00000384027 73 ntBASIC-1.4□□□□□ -2.63
HLA-DMBP28068 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.4□□□□□ -2.63
HLA-DMBP28068 MIR4696-201ENST00000581431 70 ntBASIC-1.4□□□□□ -2.63
HLA-DMBP28068 MIR4723-201ENST00000585070 81 ntBASIC-1.4□□□□□ -2.63
HLA-DMBP28068 RNU6-664P-201ENST00000362381 107 ntBASIC-1.41□□□□□ -2.64
HLA-DMBP28068 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms