Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 Y_RNA.338-201ENST00000365320 114 ntBASIC1.91□□□□□ -2.1
NFKB1P19838 SNORA75.2-201ENST00000391138 150 ntBASIC1.91□□□□□ -2.1
NFKB1P19838 SNORA75.3-201ENST00000391231 150 ntBASIC1.91□□□□□ -2.1
NFKB1P19838 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.91□□□□□ -2.1
NFKB1P19838 RNA5SP458-201ENST00000516188 119 ntBASIC1.91□□□□□ -2.1
NFKB1P19838 Y_RNA.697-201ENST00000516776 113 ntBASIC1.91□□□□□ -2.1
NFKB1P19838 MIR4771-2-201ENST00000577758 74 ntBASIC1.91□□□□□ -2.1
NFKB1P19838 MIR4771-1-201ENST00000582617 74 ntBASIC1.91□□□□□ -2.1
NFKB1P19838 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
NFKB1P19838 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
NFKB1P19838 RNU6-482P-201ENST00000391068 107 ntBASIC1.9□□□□□ -2.11
NFKB1P19838 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
NFKB1P19838 RNU6-448P-201ENST00000517052 107 ntBASIC1.9□□□□□ -2.11
NFKB1P19838 RNU6-303P-201ENST00000517091 106 ntBASIC1.9□□□□□ -2.11
NFKB1P19838 MIR4484-201ENST00000582855 83 ntBASIC1.9□□□□□ -2.11
NFKB1P19838 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NFKB1P19838 Y_RNA.239-201ENST00000364444 113 ntBASIC1.89□□□□□ -2.11
NFKB1P19838 RPS27P16-201ENST00000425758 201 ntBASIC1.89□□□□□ -2.11
NFKB1P19838 U6.100-201ENST00000636230 99 ntBASIC1.89□□□□□ -2.11
NFKB1P19838 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NFKB1P19838 RNU5F-1-201ENST00000362507 117 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 RNU6-1051P-201ENST00000365471 102 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NFKB1P19838 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 AC074348.1-201ENST00000426503 132 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 SNORA31.2-201ENST00000516019 134 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 RN7SKP88-201ENST00000516847 250 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 AC138907.6-201ENST00000568401 126 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 AC138869.1-201ENST00000568623 124 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
NFKB1P19838 MTRNR2L2-201ENST00000604882 87 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 7SK.8-201ENST00000612110 250 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 AC106800.4-201ENST00000614905 153 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 7SK.11-201ENST00000615477 250 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 7SK.13-201ENST00000622040 250 ntBASIC1.88□□□□□ -2.11
NFKB1P19838 RNU6-664P-201ENST00000362381 107 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 SNORD101-201ENST00000384027 73 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 SNORD111-201ENST00000408139 94 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 Y_RNA.681-201ENST00000516445 113 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 RNU6-1015P-201ENST00000517121 99 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 RNU7-156P-201ENST00000517214 74 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 MIR4696-201ENST00000581431 70 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 AL645939.4-201ENST00000604495 135 ntBASIC1.87□□□□□ -2.11
NFKB1P19838 Y_RNA.12-201ENST00000362393 112 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 SNORD114-1-201ENST00000362705 72 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 Y_RNA.363-201ENST00000365529 113 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 MIR599-201ENST00000385069 95 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 RPS26P5-201ENST00000418544 335 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 RNU7-40P-201ENST00000516397 64 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 YWHAEP2-201ENST00000580066 112 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 YWHAEP3-201ENST00000582767 121 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 MIR4676-201ENST00000583078 72 ntBASIC1.86□□□□□ -2.11
NFKB1P19838 RNU6-590P-201ENST00000365039 107 ntBASIC1.85□□□□□ -2.11
NFKB1P19838 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NFKB1P19838 RNU1-78P-201ENST00000391248 165 ntBASIC1.85□□□□□ -2.11
NFKB1P19838 snoU13.17-201ENST00000458802 104 ntBASIC1.85□□□□□ -2.11
NFKB1P19838 RNU6-871P-201ENST00000516122 100 ntBASIC1.85□□□□□ -2.11
NFKB1P19838 RNU6-1265P-201ENST00000516342 103 ntBASIC1.85□□□□□ -2.11
NFKB1P19838 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
NFKB1P19838 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
NFKB1P19838 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NFKB1P19838 Y_RNA.207-201ENST00000364142 106 ntBASIC1.84□□□□□ -2.11
NFKB1P19838 RNY4P3-201ENST00000365254 95 ntBASIC1.84□□□□□ -2.11
NFKB1P19838 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
NFKB1P19838 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.84□□□□□ -2.11
NFKB1P19838 RNU6-70P-201ENST00000516438 60 ntBASIC1.84□□□□□ -2.11
NFKB1P19838 RNU6-539P-201ENST00000516665 103 ntBASIC1.84□□□□□ -2.11
NFKB1P19838 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.84□□□□□ -2.11
NFKB1P19838 AC023827.1-201ENST00000569247 97 ntBASIC1.84□□□□□ -2.11
NFKB1P19838 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
NFKB1P19838 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
NFKB1P19838 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NFKB1P19838 Y_RNA.118-201ENST00000363300 101 ntBASIC1.83□□□□□ -2.12
NFKB1P19838 RNU6-291P-201ENST00000384720 107 ntBASIC1.83□□□□□ -2.12
NFKB1P19838 Y_RNA.596-201ENST00000410462 109 ntBASIC1.83□□□□□ -2.12
NFKB1P19838 AL591704.2-201ENST00000421658 181 ntBASIC1.83□□□□□ -2.12
NFKB1P19838 RNU7-21P-201ENST00000459430 62 ntBASIC1.83□□□□□ -2.12
NFKB1P19838 RNU6-364P-201ENST00000384387 107 ntBASIC1.82□□□□□ -2.12
NFKB1P19838 RNU6-535P-201ENST00000384722 107 ntBASIC1.82□□□□□ -2.12
NFKB1P19838 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
NFKB1P19838 RNU6-687P-201ENST00000516443 89 ntBASIC1.82□□□□□ -2.12
NFKB1P19838 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.82□□□□□ -2.12
NFKB1P19838 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NFKB1P19838 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NFKB1P19838 MIR938-201ENST00000401216 83 ntBASIC1.81□□□□□ -2.12
NFKB1P19838 MIR934-201ENST00000401241 83 ntBASIC1.81□□□□□ -2.12
NFKB1P19838 RNU6-935P-201ENST00000410371 100 ntBASIC1.81□□□□□ -2.12
NFKB1P19838 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
NFKB1P19838 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NFKB1P19838 RNU6-369P-201ENST00000362515 102 ntBASIC1.8□□□□□ -2.12
NFKB1P19838 RNA5SP245-201ENST00000364239 121 ntBASIC1.8□□□□□ -2.12
NFKB1P19838 SNORA80D-201ENST00000384488 135 ntBASIC1.8□□□□□ -2.12
NFKB1P19838 MIR583-201ENST00000384846 75 ntBASIC1.8□□□□□ -2.12
NFKB1P19838 RNU6-634P-201ENST00000459134 106 ntBASIC1.8□□□□□ -2.12
NFKB1P19838 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.8□□□□□ -2.12
NFKB1P19838 AC027335.2-201ENST00000624030 375 ntBASIC1.8□□□□□ -2.12
NFKB1P19838 MIR664A-201ENST00000626086 82 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms