Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU6-521P-201ENST00000516663 105 ntBASIC0.07□□□□□ -2.4
PDGFRAP16234 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.07□□□□□ -2.4
PDGFRAP16234 RNU6-170P-201ENST00000362832 104 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 RNA5SP128-201ENST00000365305 116 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 Y_RNA.360-201ENST00000365512 102 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 SNORA2A-201ENST00000383885 135 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 RNU6-571P-201ENST00000384128 107 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 SNORD41.1-201ENST00000391000 69 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 RNA5SP136-201ENST00000410906 107 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 SNORD63B-201ENST00000411005 70 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 RNU7-195P-201ENST00000458793 62 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 SNORA70.25-201ENST00000612741 95 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 AC067863.3-201ENST00000624172 122 ntBASIC0.06□□□□□ -2.4
PDGFRAP16234 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
PDGFRAP16234 Y_RNA.85-201ENST00000363014 111 ntBASIC0.05□□□□□ -2.4
PDGFRAP16234 Y_RNA.170-201ENST00000363746 110 ntBASIC0.05□□□□□ -2.4
PDGFRAP16234 Y_RNA.362-201ENST00000365518 110 ntBASIC0.05□□□□□ -2.4
PDGFRAP16234 Y_RNA.488-201ENST00000384403 102 ntBASIC0.05□□□□□ -2.4
PDGFRAP16234 RPL39P34-201ENST00000477141 156 ntBASIC0.05□□□□□ -2.4
PDGFRAP16234 RNU6-1234P-201ENST00000516877 103 ntBASIC0.05□□□□□ -2.4
PDGFRAP16234 RNU6-794P-201ENST00000517261 64 ntBASIC0.05□□□□□ -2.4
PDGFRAP16234 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
PDGFRAP16234 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
PDGFRAP16234 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
PDGFRAP16234 Y_RNA.528-201ENST00000384575 108 ntBASIC0.04□□□□□ -2.4
PDGFRAP16234 RNU6-269P-201ENST00000391077 97 ntBASIC0.04□□□□□ -2.4
PDGFRAP16234 Y_RNA.809-201ENST00000516058 95 ntBASIC0.04□□□□□ -2.4
PDGFRAP16234 RNU6-850P-201ENST00000516934 103 ntBASIC0.04□□□□□ -2.4
PDGFRAP16234 MIR499B-201ENST00000636498 73 ntBASIC0.04□□□□□ -2.4
PDGFRAP16234 RNU6-235P-201ENST00000362644 107 ntBASIC0.03□□□□□ -2.4
PDGFRAP16234 Y_RNA.180-201ENST00000363867 113 ntBASIC0.03□□□□□ -2.4
PDGFRAP16234 MIR548D2-201ENST00000384955 97 ntBASIC0.03□□□□□ -2.4
PDGFRAP16234 MIR501-201ENST00000390204 84 ntBASIC0.03□□□□□ -2.4
PDGFRAP16234 RNU7-106P-201ENST00000459514 67 ntBASIC0.03□□□□□ -2.4
PDGFRAP16234 RNU7-200P-201ENST00000516105 62 ntBASIC0.03□□□□□ -2.4
PDGFRAP16234 MIR643-201ENST00000385267 97 ntBASIC0.02□□□□□ -2.41
PDGFRAP16234 MIR759-201ENST00000390224 91 ntBASIC0.02□□□□□ -2.41
PDGFRAP16234 MTND4LP9-201ENST00000427694 174 ntBASIC0.02□□□□□ -2.41
PDGFRAP16234 AL353813.1-201ENST00000440700 253 ntBASIC0.02□□□□□ -2.41
PDGFRAP16234 RNU6-1212P-201ENST00000517023 104 ntBASIC0.02□□□□□ -2.41
PDGFRAP16234 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
PDGFRAP16234 Y_RNA.35-201ENST00000362601 101 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 RNU6-1260P-201ENST00000362944 107 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 Y_RNA.323-201ENST00000365157 109 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 SNORD58C-201ENST00000365223 64 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 Y_RNA.464-201ENST00000384282 110 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 SNORA7.5-201ENST00000410672 110 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 RNU6-1265P-201ENST00000516342 103 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 RNU6-255P-201ENST00000516957 105 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 RNU6-1006P-201ENST00000516998 103 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
PDGFRAP16234 Y_RNA.30-201ENST00000362572 97 ntBASIC0□□□□□ -2.41
PDGFRAP16234 Y_RNA.342-201ENST00000365352 113 ntBASIC0□□□□□ -2.41
PDGFRAP16234 Y_RNA.344-201ENST00000365381 112 ntBASIC0□□□□□ -2.41
PDGFRAP16234 RNU6-524P-201ENST00000384270 107 ntBASIC0□□□□□ -2.41
PDGFRAP16234 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
PDGFRAP16234 MIR5706-201ENST00000579841 80 ntBASIC0□□□□□ -2.41
PDGFRAP16234 MIR3920-201ENST00000581751 86 ntBASIC0□□□□□ -2.41
PDGFRAP16234 uc_338.28-201ENST00000612082 187 ntBASIC0□□□□□ -2.41
PDGFRAP16234 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0□□□□□ -2.41
PDGFRAP16234 AC073869.9-201ENST00000641610 120 ntBASIC0□□□□□ -2.41
PDGFRAP16234 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.01□□□□□ -2.41
PDGFRAP16234 SNORD38.2-201ENST00000384470 69 ntBASIC-0.01□□□□□ -2.41
PDGFRAP16234 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.01□□□□□ -2.41
PDGFRAP16234 MIR516A2-201ENST00000384888 90 ntBASIC-0.01□□□□□ -2.41
PDGFRAP16234 MIR516A1-201ENST00000385033 90 ntBASIC-0.01□□□□□ -2.41
PDGFRAP16234 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.01□□□□□ -2.41
PDGFRAP16234 AC025166.1-201ENST00000612411 163 ntBASIC-0.01□□□□□ -2.41
PDGFRAP16234 RNU6-363P-201ENST00000362895 105 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 MIR610-201ENST00000385139 96 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 RNU6-257P-201ENST00000410238 98 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 RNU6-346P-201ENST00000516288 111 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 RNU7-13P-201ENST00000516413 62 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 RNU6-782P-201ENST00000516852 104 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 MIR548AD-201ENST00000584780 82 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 MTND5P18-201ENST00000445624 1801 ntBASIC-0.02□□□□□ -2.41
PDGFRAP16234 RNA5SP257-201ENST00000363023 116 ntBASIC-0.03□□□□□ -2.41
PDGFRAP16234 RNA5SP484-201ENST00000458857 111 ntBASIC-0.03□□□□□ -2.41
PDGFRAP16234 RNU6-772P-201ENST00000516042 105 ntBASIC-0.03□□□□□ -2.41
PDGFRAP16234 MTND5P40-201ENST00000559945 246 ntBASIC-0.03□□□□□ -2.41
PDGFRAP16234 MIR4743-201ENST00000584576 69 ntBASIC-0.03□□□□□ -2.41
PDGFRAP16234 RNU6-161P-201ENST00000363051 106 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 RNY1P5-201ENST00000383890 115 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 MIR593-201ENST00000384856 100 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 MIR145-201ENST00000384967 88 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 SNORA40-201ENST00000388090 126 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 NAMPTP3-201ENST00000569273 224 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 MIR4677-201ENST00000584153 80 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 AL512310.12-203ENST00000640543 90 ntBASIC-0.04□□□□□ -2.42
PDGFRAP16234 RNY4P6-201ENST00000363667 96 ntBASIC-0.05□□□□□ -2.42
PDGFRAP16234 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms