Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR329-2-201ENST00000385029 84 ntBASIC-0.4□□□□□ -2.47
HLA-DPB1P04440 MIR516A1-201ENST00000385033 90 ntBASIC-0.4□□□□□ -2.47
HLA-DPB1P04440 AC109327.2-201ENST00000448339 378 ntBASIC-0.4□□□□□ -2.47
HLA-DPB1P04440 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
HLA-DPB1P04440 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.4□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.41□□□□□ -2.48
HLA-DPB1P04440 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.41□□□□□ -2.48
HLA-DPB1P04440 AC244250.2-201ENST00000418731 148 ntBASIC-0.41□□□□□ -2.48
HLA-DPB1P04440 AC093423.1-201ENST00000440817 142 ntBASIC-0.41□□□□□ -2.48
HLA-DPB1P04440 RNU7-74P-201ENST00000459104 62 ntBASIC-0.41□□□□□ -2.48
HLA-DPB1P04440 RNU7-6P-201ENST00000516845 62 ntBASIC-0.41□□□□□ -2.48
HLA-DPB1P04440 IGKV1-22-201ENST00000524313 326 ntBASIC-0.41□□□□□ -2.48
HLA-DPB1P04440 U4.1-201ENST00000620349 87 ntBASIC-0.41□□□□□ -2.48
HLA-DPB1P04440 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.42□□□□□ -2.48
HLA-DPB1P04440 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.42□□□□□ -2.48
HLA-DPB1P04440 RNU6-521P-201ENST00000516663 105 ntBASIC-0.42□□□□□ -2.48
HLA-DPB1P04440 RNU7-188P-201ENST00000517063 64 ntBASIC-0.42□□□□□ -2.48
HLA-DPB1P04440 MIR4503-201ENST00000582187 83 ntBASIC-0.42□□□□□ -2.48
HLA-DPB1P04440 MIR6507-201ENST00000613630 70 ntBASIC-0.42□□□□□ -2.48
HLA-DPB1P04440 U8.6-201ENST00000364939 135 ntBASIC-0.43□□□□□ -2.48
HLA-DPB1P04440 RNU6-574P-201ENST00000384265 107 ntBASIC-0.43□□□□□ -2.48
HLA-DPB1P04440 MIR617-201ENST00000385030 97 ntBASIC-0.43□□□□□ -2.48
HLA-DPB1P04440 YWHAEP2-201ENST00000580066 112 ntBASIC-0.43□□□□□ -2.48
HLA-DPB1P04440 MIR548AE1-201ENST00000583292 70 ntBASIC-0.43□□□□□ -2.48
HLA-DPB1P04440 MIR3666-201ENST00000607845 111 ntBASIC-0.43□□□□□ -2.48
HLA-DPB1P04440 AC069503.3-201ENST00000618674 145 ntBASIC-0.43□□□□□ -2.48
HLA-DPB1P04440 MIR655-201ENST00000362159 97 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 SNORD115-19-201ENST00000363098 82 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 SNORD115-18-201ENST00000363293 82 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 SNORD115-17-201ENST00000364612 82 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 RNU6-811P-201ENST00000384069 107 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 RNA5SP300-201ENST00000391197 107 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 MIR1255B1-201ENST00000636325 63 ntBASIC-0.44□□□□□ -2.48
HLA-DPB1P04440 SNORA51.5-201ENST00000384126 131 ntBASIC-0.45□□□□□ -2.48
HLA-DPB1P04440 AL161932.1-201ENST00000437408 146 ntBASIC-0.45□□□□□ -2.48
HLA-DPB1P04440 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.45□□□□□ -2.48
HLA-DPB1P04440 MIR2113-201ENST00000459007 91 ntBASIC-0.45□□□□□ -2.48
HLA-DPB1P04440 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.45□□□□□ -2.48
HLA-DPB1P04440 AC021753.1-201ENST00000635724 168 ntBASIC-0.45□□□□□ -2.48
HLA-DPB1P04440 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 RNU6-694P-201ENST00000364071 147 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 RNA5SP205-201ENST00000364653 136 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 RNU4-11P-201ENST00000365287 132 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 MIR181B2-201ENST00000385004 89 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 RNU6-460P-201ENST00000391158 108 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 AC096531.1-201ENST00000419107 107 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 RNU7-197P-201ENST00000458836 62 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 RNA5SP285-201ENST00000516619 119 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 AC072026.1-201ENST00000605023 201 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 MIR6759-201ENST00000638110 65 ntBASIC-0.46□□□□□ -2.48
HLA-DPB1P04440 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 SNORD115-44-201ENST00000365391 82 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 RNU6-735P-201ENST00000410612 107 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 MTND3P2-201ENST00000438452 342 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 RNU6-287P-201ENST00000516230 98 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 MIR4460-201ENST00000577862 86 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 MIR3121-201ENST00000579680 77 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 uc_338.10-201ENST00000621872 182 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 AL162726.3-218ENST00000636401 95 ntBASIC-0.47□□□□□ -2.48
HLA-DPB1P04440 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.48□□□□□ -2.49
HLA-DPB1P04440 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.48□□□□□ -2.49
HLA-DPB1P04440 RNU6-175P-201ENST00000516896 107 ntBASIC-0.48□□□□□ -2.49
HLA-DPB1P04440 AP002392.1-201ENST00000537692 208 ntBASIC-0.48□□□□□ -2.49
HLA-DPB1P04440 MIR3163-201ENST00000581592 73 ntBASIC-0.48□□□□□ -2.49
HLA-DPB1P04440 TRDV1-202ENST00000621643 102 ntBASIC-0.48□□□□□ -2.49
HLA-DPB1P04440 U6.100-201ENST00000636230 99 ntBASIC-0.48□□□□□ -2.49
HLA-DPB1P04440 MIR4788-201ENST00000639104 80 ntBASIC-0.48□□□□□ -2.49
HLA-DPB1P04440 SNORD36A-201ENST00000362874 73 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 RNU6-915P-201ENST00000364943 103 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 RNU6-196P-201ENST00000384315 107 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 RNU6-861P-201ENST00000516745 106 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.49□□□□□ -2.49
HLA-DPB1P04440 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.5□□□□□ -2.49
HLA-DPB1P04440 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.5□□□□□ -2.49
HLA-DPB1P04440 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.5□□□□□ -2.49
HLA-DPB1P04440 MIR539-201ENST00000365690 78 ntBASIC-0.5□□□□□ -2.49
HLA-DPB1P04440 SNORD38.2-201ENST00000384470 69 ntBASIC-0.5□□□□□ -2.49
HLA-DPB1P04440 SNORA7.5-201ENST00000410672 110 ntBASIC-0.5□□□□□ -2.49
HLA-DPB1P04440 AL590491.3-201ENST00000610731 82 ntBASIC-0.5□□□□□ -2.49
HLA-DPB1P04440 RNU6-682P-201ENST00000363843 106 ntBASIC-0.51□□□□□ -2.49
HLA-DPB1P04440 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.51□□□□□ -2.49
HLA-DPB1P04440 RNU6-154P-201ENST00000384306 106 ntBASIC-0.51□□□□□ -2.49
HLA-DPB1P04440 AL353813.1-201ENST00000440700 253 ntBASIC-0.51□□□□□ -2.49
HLA-DPB1P04440 RN7SKP19-201ENST00000516016 252 ntBASIC-0.51□□□□□ -2.49
HLA-DPB1P04440 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.52□□□□□ -2.49
HLA-DPB1P04440 SNORD114-31-201ENST00000363219 75 ntBASIC-0.52□□□□□ -2.49
HLA-DPB1P04440 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 234.7 ms