Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 RNU6-242P-201ENST00000384359 107 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 RNU1-119P-201ENST00000391122 165 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 RNU7-195P-201ENST00000458793 62 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 snoU13.23-201ENST00000458863 104 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.13□□□□□ -2.23
SPDEFO95238 AC008608.1-201ENST00000603910 127 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 MIR548BB-201ENST00000626714 66 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
SPDEFO95238 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SPDEFO95238 RNU6-291P-201ENST00000384720 107 ntBASIC1.12□□□□□ -2.23
SPDEFO95238 MIR520F-201ENST00000384824 87 ntBASIC1.12□□□□□ -2.23
SPDEFO95238 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
SPDEFO95238 AL591806.2-201ENST00000433122 173 ntBASIC1.12□□□□□ -2.23
SPDEFO95238 RMST_2.1-201ENST00000617263 136 ntBASIC1.12□□□□□ -2.23
SPDEFO95238 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
SPDEFO95238 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SPDEFO95238 RNU6-1260P-201ENST00000362944 107 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 Y_RNA.283-201ENST00000364798 112 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 RNU6-1276P-201ENST00000365372 104 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 RNU6-535P-201ENST00000384722 107 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 MIR519C-201ENST00000385053 87 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 RNU6-466P-201ENST00000391224 103 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 Y_RNA.611-201ENST00000410682 108 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 Y_RNA.809-201ENST00000516058 95 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 AC138907.6-201ENST00000568401 126 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 AC138869.1-201ENST00000568623 124 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 AL359821.1-201ENST00000605519 182 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 MIR1245B-201ENST00000636115 69 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 AC006160.2-201ENST00000637708 154 ntBASIC1.11□□□□□ -2.23
SPDEFO95238 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SPDEFO95238 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
SPDEFO95238 Y_RNA.219-201ENST00000364232 113 ntBASIC1.1□□□□□ -2.23
SPDEFO95238 Y_RNA.426-201ENST00000384068 113 ntBASIC1.1□□□□□ -2.23
SPDEFO95238 AC097635.1-201ENST00000450678 155 ntBASIC1.1□□□□□ -2.23
SPDEFO95238 RNU7-171P-201ENST00000459581 62 ntBASIC1.1□□□□□ -2.23
SPDEFO95238 AC108210.2-201ENST00000503681 201 ntBASIC1.1□□□□□ -2.23
SPDEFO95238 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
SPDEFO95238 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.1□□□□□ -2.23
SPDEFO95238 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
SPDEFO95238 RNU1-17P-201ENST00000363022 152 ntBASIC1.09□□□□□ -2.23
SPDEFO95238 FABP5P4-201ENST00000437203 171 ntBASIC1.09□□□□□ -2.23
SPDEFO95238 RNU6-75P-201ENST00000515944 104 ntBASIC1.09□□□□□ -2.23
SPDEFO95238 RNU6-65P-201ENST00000516332 98 ntBASIC1.09□□□□□ -2.23
SPDEFO95238 MIR4536-1-201ENST00000583537 88 ntBASIC1.09□□□□□ -2.23
SPDEFO95238 AL136317.1-201ENST00000612653 226 ntBASIC1.09□□□□□ -2.23
SPDEFO95238 RNU6-957P-201ENST00000363652 99 ntBASIC1.08□□□□□ -2.24
SPDEFO95238 RNA5SP245-201ENST00000364239 121 ntBASIC1.08□□□□□ -2.24
SPDEFO95238 SNORA11.2-201ENST00000408318 127 ntBASIC1.08□□□□□ -2.24
SPDEFO95238 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
SPDEFO95238 RNU6-1110P-201ENST00000516462 101 ntBASIC1.08□□□□□ -2.24
SPDEFO95238 RNU1-92P-201ENST00000517017 135 ntBASIC1.08□□□□□ -2.24
SPDEFO95238 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
SPDEFO95238 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.08□□□□□ -2.24
SPDEFO95238 RNU4-32P-201ENST00000363404 141 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 RNU6-524P-201ENST00000384270 107 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 MIR599-201ENST00000385069 95 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 MIR520H-201ENST00000385126 88 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SPDEFO95238 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 MIR1236-201ENST00000408340 102 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 AC244505.6-201ENST00000452829 130 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 U7.7-201ENST00000459276 60 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 MIR3202-2-201ENST00000635980 79 ntBASIC1.07□□□□□ -2.24
SPDEFO95238 MIR764-201ENST00000390811 85 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 SNORD78.1-201ENST00000390866 65 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 Y_RNA.607-201ENST00000410597 98 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 RNU1-123P-201ENST00000458950 160 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 AC093729.1-201ENST00000513074 128 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 MIR4666B-201ENST00000578142 81 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 MIR4303-201ENST00000581299 66 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 TRDV1-202ENST00000621643 102 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 uc_338.16-201ENST00000621804 95 ntBASIC1.06□□□□□ -2.24
SPDEFO95238 Y_RNA.32-201ENST00000362589 110 ntBASIC1.05□□□□□ -2.24
SPDEFO95238 SNORD115-37-201ENST00000363768 82 ntBASIC1.05□□□□□ -2.24
SPDEFO95238 RNU6-787P-201ENST00000384032 107 ntBASIC1.05□□□□□ -2.24
SPDEFO95238 RNU6-811P-201ENST00000384069 107 ntBASIC1.05□□□□□ -2.24
SPDEFO95238 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.05□□□□□ -2.24
SPDEFO95238 AL606490.4-201ENST00000423117 127 ntBASIC1.05□□□□□ -2.24
SPDEFO95238 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SPDEFO95238 RNU6-228P-201ENST00000362700 106 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 Y_RNA.174-201ENST00000363781 105 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 RNU6-132P-201ENST00000383863 107 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 Y_RNA.508-201ENST00000384502 114 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 SNORD105-201ENST00000386910 85 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 RNU6-1275P-201ENST00000391087 107 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 MIR942-201ENST00000401111 86 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 RNU7-153P-201ENST00000516455 62 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 SNORA31.14-201ENST00000516728 116 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 AC015712.3-201ENST00000559380 164 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 MIR4421-201ENST00000578133 69 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 MIR3064-201ENST00000581130 66 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 MIR3660-201ENST00000584845 100 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 AL353997.5-201ENST00000618886 171 ntBASIC1.04□□□□□ -2.24
SPDEFO95238 RNU6-1124P-201ENST00000384169 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms